Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1275:A1298
Extra
PDB:
ATOM 1 O3' G A1274 4.061 136.607 57.296 1.00 50.69 O
ATOM 2 P G A1275 5.071 136.645 58.535 1.00 46.74 P
ATOM 3 OP1 G A1275 4.861 135.357 59.223 1.00 47.13 O
ATOM 4 OP2 G A1275 4.907 137.915 59.268 1.00 44.38 O
ATOM 5 O5' G A1275 6.511 136.618 57.882 1.00 45.93 O
ATOM 6 C5' G A1275 7.101 135.398 57.452 1.00 45.17 C
ATOM 7 C4' G A1275 8.590 135.563 57.448 1.00 45.57 C
ATOM 8 O4' G A1275 8.907 136.830 56.797 1.00 46.06 O
ATOM 9 C3' G A1275 9.226 135.654 58.827 1.00 45.11 C
ATOM 10 O3' G A1275 10.542 135.158 58.693 1.00 44.93 O
ATOM 11 C2' G A1275 9.285 137.150 59.086 1.00 43.95 C
ATOM 12 O2' G A1275 10.311 137.452 59.996 1.00 43.63 O
ATOM 13 C1' G A1275 9.621 137.665 57.688 1.00 43.61 C
ATOM 14 N9 G A1275 9.300 139.067 57.407 1.00 42.08 N
ATOM 15 C8 G A1275 8.134 139.742 57.688 1.00 41.81 C
ATOM 16 N7 G A1275 8.191 141.011 57.383 1.00 41.47 N
ATOM 17 C5 G A1275 9.463 141.184 56.851 1.00 40.72 C
ATOM 18 C6 G A1275 10.109 142.355 56.358 1.00 40.10 C
ATOM 19 O6 G A1275 9.683 143.511 56.313 1.00 39.58 O
ATOM 20 N1 G A1275 11.388 142.076 55.898 1.00 39.78 N
ATOM 21 C2 G A1275 11.984 140.840 55.917 1.00 39.90 C
ATOM 22 N2 G A1275 13.242 140.779 55.434 1.00 38.83 N
ATOM 23 N3 G A1275 11.397 139.746 56.377 1.00 40.17 N
ATOM 24 C4 G A1275 10.150 139.990 56.831 1.00 40.76 C
ATOM 25 P A A1276 11.147 134.208 59.823 1.00 45.89 P
ATOM 26 OP1 A A1276 10.092 133.290 60.321 1.00 44.55 O
ATOM 27 OP2 A A1276 11.858 135.081 60.789 1.00 45.55 O
ATOM 28 O5' A A1276 12.221 133.356 59.019 1.00 42.28 O
TER
ATOM 1 O3' U B1297 15.704 144.348 66.448 1.00 44.89 O
ATOM 2 P G B1298 15.527 144.797 64.914 1.00 44.67 P
ATOM 3 OP1 G B1298 16.338 146.021 64.861 1.00 46.95 O
ATOM 4 OP2 G B1298 14.110 144.835 64.474 1.00 42.35 O
ATOM 5 O5' G B1298 16.305 143.688 64.091 1.00 42.40 O
ATOM 6 C5' G B1298 17.711 143.497 64.278 1.00 41.94 C
ATOM 7 C4' G B1298 18.145 142.284 63.525 1.00 41.34 C
ATOM 8 O4' G B1298 17.364 141.169 64.010 1.00 39.36 O
ATOM 9 C3' G B1298 17.843 142.360 62.039 1.00 41.21 C
ATOM 10 O3' G B1298 18.931 142.992 61.359 1.00 42.84 O
ATOM 11 C2' G B1298 17.703 140.896 61.675 1.00 40.62 C
ATOM 12 O2' G B1298 18.995 140.334 61.583 1.00 40.83 O
ATOM 13 C1' G B1298 17.008 140.343 62.924 1.00 40.73 C
ATOM 14 N9 G B1298 15.549 140.221 62.892 1.00 41.73 N
ATOM 15 C8 G B1298 14.612 141.171 63.234 1.00 42.42 C
ATOM 16 N7 G B1298 13.388 140.714 63.219 1.00 43.08 N
ATOM 17 C5 G B1298 13.527 139.391 62.815 1.00 41.89 C
ATOM 18 C6 G B1298 12.560 138.369 62.630 1.00 42.63 C
ATOM 19 O6 G B1298 11.333 138.413 62.815 1.00 43.80 O
ATOM 20 N1 G B1298 13.153 137.187 62.192 1.00 42.33 N
ATOM 21 C2 G B1298 14.491 137.005 61.968 1.00 41.10 C
ATOM 22 N2 G B1298 14.865 135.794 61.542 1.00 41.94 N
ATOM 23 N3 G B1298 15.393 137.934 62.146 1.00 40.28 N
ATOM 24 C4 G B1298 14.850 139.089 62.572 1.00 41.43 C
ATOM 25 P G B1299 18.655 144.228 60.364 1.00 44.60 P
ATOM 26 OP1 G B1299 19.906 145.032 60.228 1.00 44.99 O
ATOM 27 OP2 G B1299 17.411 144.901 60.811 1.00 45.90 O
ATOM 28 O5' G B1299 18.387 143.501 58.979 1.00 44.83 O
TER
ATOM 2 P G A1275 5.071 136.645 58.535 1.00 46.74 P
ATOM 3 OP1 G A1275 4.861 135.357 59.223 1.00 47.13 O
ATOM 4 OP2 G A1275 4.907 137.915 59.268 1.00 44.38 O
ATOM 5 O5' G A1275 6.511 136.618 57.882 1.00 45.93 O
ATOM 6 C5' G A1275 7.101 135.398 57.452 1.00 45.17 C
ATOM 7 C4' G A1275 8.590 135.563 57.448 1.00 45.57 C
ATOM 8 O4' G A1275 8.907 136.830 56.797 1.00 46.06 O
ATOM 9 C3' G A1275 9.226 135.654 58.827 1.00 45.11 C
ATOM 10 O3' G A1275 10.542 135.158 58.693 1.00 44.93 O
ATOM 11 C2' G A1275 9.285 137.150 59.086 1.00 43.95 C
ATOM 12 O2' G A1275 10.311 137.452 59.996 1.00 43.63 O
ATOM 13 C1' G A1275 9.621 137.665 57.688 1.00 43.61 C
ATOM 14 N9 G A1275 9.300 139.067 57.407 1.00 42.08 N
ATOM 15 C8 G A1275 8.134 139.742 57.688 1.00 41.81 C
ATOM 16 N7 G A1275 8.191 141.011 57.383 1.00 41.47 N
ATOM 17 C5 G A1275 9.463 141.184 56.851 1.00 40.72 C
ATOM 18 C6 G A1275 10.109 142.355 56.358 1.00 40.10 C
ATOM 19 O6 G A1275 9.683 143.511 56.313 1.00 39.58 O
ATOM 20 N1 G A1275 11.388 142.076 55.898 1.00 39.78 N
ATOM 21 C2 G A1275 11.984 140.840 55.917 1.00 39.90 C
ATOM 22 N2 G A1275 13.242 140.779 55.434 1.00 38.83 N
ATOM 23 N3 G A1275 11.397 139.746 56.377 1.00 40.17 N
ATOM 24 C4 G A1275 10.150 139.990 56.831 1.00 40.76 C
ATOM 25 P A A1276 11.147 134.208 59.823 1.00 45.89 P
ATOM 26 OP1 A A1276 10.092 133.290 60.321 1.00 44.55 O
ATOM 27 OP2 A A1276 11.858 135.081 60.789 1.00 45.55 O
ATOM 28 O5' A A1276 12.221 133.356 59.019 1.00 42.28 O
TER
ATOM 1 O3' U B1297 15.704 144.348 66.448 1.00 44.89 O
ATOM 2 P G B1298 15.527 144.797 64.914 1.00 44.67 P
ATOM 3 OP1 G B1298 16.338 146.021 64.861 1.00 46.95 O
ATOM 4 OP2 G B1298 14.110 144.835 64.474 1.00 42.35 O
ATOM 5 O5' G B1298 16.305 143.688 64.091 1.00 42.40 O
ATOM 6 C5' G B1298 17.711 143.497 64.278 1.00 41.94 C
ATOM 7 C4' G B1298 18.145 142.284 63.525 1.00 41.34 C
ATOM 8 O4' G B1298 17.364 141.169 64.010 1.00 39.36 O
ATOM 9 C3' G B1298 17.843 142.360 62.039 1.00 41.21 C
ATOM 10 O3' G B1298 18.931 142.992 61.359 1.00 42.84 O
ATOM 11 C2' G B1298 17.703 140.896 61.675 1.00 40.62 C
ATOM 12 O2' G B1298 18.995 140.334 61.583 1.00 40.83 O
ATOM 13 C1' G B1298 17.008 140.343 62.924 1.00 40.73 C
ATOM 14 N9 G B1298 15.549 140.221 62.892 1.00 41.73 N
ATOM 15 C8 G B1298 14.612 141.171 63.234 1.00 42.42 C
ATOM 16 N7 G B1298 13.388 140.714 63.219 1.00 43.08 N
ATOM 17 C5 G B1298 13.527 139.391 62.815 1.00 41.89 C
ATOM 18 C6 G B1298 12.560 138.369 62.630 1.00 42.63 C
ATOM 19 O6 G B1298 11.333 138.413 62.815 1.00 43.80 O
ATOM 20 N1 G B1298 13.153 137.187 62.192 1.00 42.33 N
ATOM 21 C2 G B1298 14.491 137.005 61.968 1.00 41.10 C
ATOM 22 N2 G B1298 14.865 135.794 61.542 1.00 41.94 N
ATOM 23 N3 G B1298 15.393 137.934 62.146 1.00 40.28 N
ATOM 24 C4 G B1298 14.850 139.089 62.572 1.00 41.43 C
ATOM 25 P G B1299 18.655 144.228 60.364 1.00 44.60 P
ATOM 26 OP1 G B1299 19.906 145.032 60.228 1.00 44.99 O
ATOM 27 OP2 G B1299 17.411 144.901 60.811 1.00 45.90 O
ATOM 28 O5' G B1299 18.387 143.501 58.979 1.00 44.83 O
TER
Atoms:
OP1: (4.861,135.357,59.223)
OP2: (4.907,137.915,59.268)
C3': (9.226,135.654,58.827)
C1': (9.621,137.665,57.688)
C5': (7.101,135.398,57.452)
O6: (9.683,143.511,56.313)
O4': (8.907,136.830,56.797)
C8: (8.134,139.742,57.688)
C2: (11.984,140.840,55.917)
C6: (10.109,142.355,56.358)
C5: (9.463,141.184,56.851)
C4: (10.150,139.990,56.831)
P: (5.071,136.645,58.535)
C4': (8.590,135.563,57.448)
C2': (9.285,137.150,59.086)
O2': (10.311,137.452,59.996)
N1: (11.388,142.076,55.898)
N2: (13.242,140.779,55.434)
N3: (11.397,139.746,56.377)
N7: (8.191,141.011,57.383)
N9: (9.300,139.067,57.407)
O5': (6.511,136.618,57.882)
O3': (10.542,135.158,58.693)
OP2: (4.907,137.915,59.268)
C3': (9.226,135.654,58.827)
C1': (9.621,137.665,57.688)
C5': (7.101,135.398,57.452)
O6: (9.683,143.511,56.313)
O4': (8.907,136.830,56.797)
C8: (8.134,139.742,57.688)
C2: (11.984,140.840,55.917)
C6: (10.109,142.355,56.358)
C5: (9.463,141.184,56.851)
C4: (10.150,139.990,56.831)
P: (5.071,136.645,58.535)
C4': (8.590,135.563,57.448)
C2': (9.285,137.150,59.086)
O2': (10.311,137.452,59.996)
N1: (11.388,142.076,55.898)
N2: (13.242,140.779,55.434)
N3: (11.397,139.746,56.377)
N7: (8.191,141.011,57.383)
N9: (9.300,139.067,57.407)
O5': (6.511,136.618,57.882)
O3': (10.542,135.158,58.693)
OP1: (16.338,146.021,64.861)
OP2: (14.110,144.835,64.474)
C3': (17.843,142.360,62.039)
C1': (17.008,140.343,62.924)
C5': (17.711,143.497,64.278)
O6: (11.333,138.413,62.815)
O4': (17.364,141.169,64.010)
C8: (14.612,141.171,63.234)
C2: (14.491,137.005,61.968)
C6: (12.560,138.369,62.630)
C5: (13.527,139.391,62.815)
C4: (14.850,139.089,62.572)
P: (15.527,144.797,64.914)
C4': (18.145,142.284,63.525)
C2': (17.703,140.896,61.675)
O2': (18.995,140.334,61.583)
N1: (13.153,137.187,62.192)
N2: (14.865,135.794,61.542)
N3: (15.393,137.934,62.146)
N7: (13.388,140.714,63.219)
N9: (15.549,140.221,62.892)
O5': (16.305,143.688,64.091)
O3': (18.931,142.992,61.359)
OP2: (14.110,144.835,64.474)
C3': (17.843,142.360,62.039)
C1': (17.008,140.343,62.924)
C5': (17.711,143.497,64.278)
O6: (11.333,138.413,62.815)
O4': (17.364,141.169,64.010)
C8: (14.612,141.171,63.234)
C2: (14.491,137.005,61.968)
C6: (12.560,138.369,62.630)
C5: (13.527,139.391,62.815)
C4: (14.850,139.089,62.572)
P: (15.527,144.797,64.914)
C4': (18.145,142.284,63.525)
C2': (17.703,140.896,61.675)
O2': (18.995,140.334,61.583)
N1: (13.153,137.187,62.192)
N2: (14.865,135.794,61.542)
N3: (15.393,137.934,62.146)
N7: (13.388,140.714,63.219)
N9: (15.549,140.221,62.892)
O5': (16.305,143.688,64.091)
O3': (18.931,142.992,61.359)
Image (generated by PyMOL):