Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A13:A506
Extra
PDB:
ATOM 1 O3' U A 12 34.370 148.278 74.067 1.00 38.81 O
ATOM 2 P G A 13 34.865 147.892 72.606 1.00 39.68 P
ATOM 3 OP1 G A 13 36.216 148.437 72.415 1.00 41.10 O
ATOM 4 OP2 G A 13 33.775 148.271 71.668 1.00 42.50 O
ATOM 5 O5' G A 13 34.941 146.305 72.616 1.00 41.65 O
ATOM 6 C5' G A 13 35.956 145.584 73.330 1.00 40.08 C
ATOM 7 C4' G A 13 35.581 144.129 73.341 1.00 39.60 C
ATOM 8 O4' G A 13 34.270 143.987 73.958 1.00 40.68 O
ATOM 9 C3' G A 13 35.374 143.608 71.932 1.00 36.94 C
ATOM 10 O3' G A 13 36.600 143.178 71.403 1.00 33.07 O
ATOM 11 C2' G A 13 34.365 142.485 72.102 1.00 38.56 C
ATOM 12 O2' G A 13 34.926 141.260 72.483 1.00 37.84 O
ATOM 13 C1' G A 13 33.505 143.033 73.233 1.00 39.60 C
ATOM 14 N9 G A 13 32.330 143.689 72.694 1.00 40.71 N
ATOM 15 C8 G A 13 32.228 144.950 72.168 1.00 41.24 C
ATOM 16 N7 G A 13 31.008 145.266 71.852 1.00 42.60 N
ATOM 17 C5 G A 13 30.275 144.135 72.178 1.00 42.10 C
ATOM 18 C6 G A 13 28.902 143.895 72.102 1.00 42.18 C
ATOM 19 O6 G A 13 28.015 144.675 71.751 1.00 42.86 O
ATOM 20 N1 G A 13 28.582 142.602 72.511 1.00 41.55 N
ATOM 21 C2 G A 13 29.483 141.671 72.950 1.00 41.19 C
ATOM 22 N2 G A 13 28.980 140.469 73.288 1.00 40.17 N
ATOM 23 N3 G A 13 30.771 141.900 73.047 1.00 41.87 N
ATOM 24 C4 G A 13 31.091 143.146 72.653 1.00 41.50 C
ATOM 25 P G A 14 36.884 143.331 69.843 1.00 32.86 P
ATOM 26 OP1 G A 14 38.335 143.155 69.626 1.00 29.72 O
ATOM 27 OP2 G A 14 36.219 144.584 69.400 1.00 33.90 O
ATOM 28 O5' G A 14 36.140 142.085 69.206 1.00 30.37 O
TER
ATOM 1 O3' U B 505 21.198 141.228 64.962 1.00 42.47 O
ATOM 2 P G B 506 20.918 141.929 66.367 1.00 43.69 P
ATOM 3 OP1 G B 506 19.762 141.169 66.917 1.00 42.86 O
ATOM 4 OP2 G B 506 20.806 143.390 66.170 1.00 43.54 O
ATOM 5 O5' G B 506 22.237 141.650 67.215 1.00 41.47 O
ATOM 6 C5' G B 506 22.736 140.319 67.367 1.00 40.48 C
ATOM 7 C4' G B 506 24.131 140.335 67.932 1.00 40.36 C
ATOM 8 O4' G B 506 25.058 140.920 66.971 1.00 39.72 O
ATOM 9 C3' G B 506 24.294 141.137 69.219 1.00 39.24 C
ATOM 10 O3' G B 506 25.160 140.434 70.066 1.00 38.79 O
ATOM 11 C2' G B 506 25.027 142.381 68.747 1.00 39.15 C
ATOM 12 O2' G B 506 25.816 143.001 69.739 1.00 36.47 O
ATOM 13 C1' G B 506 25.918 141.780 67.669 1.00 39.66 C
ATOM 14 N9 G B 506 26.480 142.777 66.768 1.00 40.93 N
ATOM 15 C8 G B 506 25.918 143.963 66.371 1.00 41.45 C
ATOM 16 N7 G B 506 26.742 144.719 65.701 1.00 42.23 N
ATOM 17 C5 G B 506 27.903 143.965 65.617 1.00 42.94 C
ATOM 18 C6 G B 506 29.164 144.269 65.039 1.00 42.52 C
ATOM 19 O6 G B 506 29.515 145.302 64.463 1.00 42.92 O
ATOM 20 N1 G B 506 30.068 143.214 65.192 1.00 42.27 N
ATOM 21 C2 G B 506 29.795 142.024 65.820 1.00 42.68 C
ATOM 22 N2 G B 506 30.789 141.135 65.872 1.00 42.59 N
ATOM 23 N3 G B 506 28.628 141.732 66.361 1.00 43.60 N
ATOM 24 C4 G B 506 27.737 142.744 66.231 1.00 42.56 C
ATOM 25 P A B 507 24.920 140.471 71.639 1.00 38.79 P
ATOM 26 OP1 A B 507 23.468 140.550 71.911 1.00 38.99 O
ATOM 27 OP2 A B 507 25.824 141.489 72.224 1.00 38.51 O
ATOM 28 O5' A B 507 25.315 138.992 72.032 1.00 38.14 O
TER
ATOM 2 P G A 13 34.865 147.892 72.606 1.00 39.68 P
ATOM 3 OP1 G A 13 36.216 148.437 72.415 1.00 41.10 O
ATOM 4 OP2 G A 13 33.775 148.271 71.668 1.00 42.50 O
ATOM 5 O5' G A 13 34.941 146.305 72.616 1.00 41.65 O
ATOM 6 C5' G A 13 35.956 145.584 73.330 1.00 40.08 C
ATOM 7 C4' G A 13 35.581 144.129 73.341 1.00 39.60 C
ATOM 8 O4' G A 13 34.270 143.987 73.958 1.00 40.68 O
ATOM 9 C3' G A 13 35.374 143.608 71.932 1.00 36.94 C
ATOM 10 O3' G A 13 36.600 143.178 71.403 1.00 33.07 O
ATOM 11 C2' G A 13 34.365 142.485 72.102 1.00 38.56 C
ATOM 12 O2' G A 13 34.926 141.260 72.483 1.00 37.84 O
ATOM 13 C1' G A 13 33.505 143.033 73.233 1.00 39.60 C
ATOM 14 N9 G A 13 32.330 143.689 72.694 1.00 40.71 N
ATOM 15 C8 G A 13 32.228 144.950 72.168 1.00 41.24 C
ATOM 16 N7 G A 13 31.008 145.266 71.852 1.00 42.60 N
ATOM 17 C5 G A 13 30.275 144.135 72.178 1.00 42.10 C
ATOM 18 C6 G A 13 28.902 143.895 72.102 1.00 42.18 C
ATOM 19 O6 G A 13 28.015 144.675 71.751 1.00 42.86 O
ATOM 20 N1 G A 13 28.582 142.602 72.511 1.00 41.55 N
ATOM 21 C2 G A 13 29.483 141.671 72.950 1.00 41.19 C
ATOM 22 N2 G A 13 28.980 140.469 73.288 1.00 40.17 N
ATOM 23 N3 G A 13 30.771 141.900 73.047 1.00 41.87 N
ATOM 24 C4 G A 13 31.091 143.146 72.653 1.00 41.50 C
ATOM 25 P G A 14 36.884 143.331 69.843 1.00 32.86 P
ATOM 26 OP1 G A 14 38.335 143.155 69.626 1.00 29.72 O
ATOM 27 OP2 G A 14 36.219 144.584 69.400 1.00 33.90 O
ATOM 28 O5' G A 14 36.140 142.085 69.206 1.00 30.37 O
TER
ATOM 1 O3' U B 505 21.198 141.228 64.962 1.00 42.47 O
ATOM 2 P G B 506 20.918 141.929 66.367 1.00 43.69 P
ATOM 3 OP1 G B 506 19.762 141.169 66.917 1.00 42.86 O
ATOM 4 OP2 G B 506 20.806 143.390 66.170 1.00 43.54 O
ATOM 5 O5' G B 506 22.237 141.650 67.215 1.00 41.47 O
ATOM 6 C5' G B 506 22.736 140.319 67.367 1.00 40.48 C
ATOM 7 C4' G B 506 24.131 140.335 67.932 1.00 40.36 C
ATOM 8 O4' G B 506 25.058 140.920 66.971 1.00 39.72 O
ATOM 9 C3' G B 506 24.294 141.137 69.219 1.00 39.24 C
ATOM 10 O3' G B 506 25.160 140.434 70.066 1.00 38.79 O
ATOM 11 C2' G B 506 25.027 142.381 68.747 1.00 39.15 C
ATOM 12 O2' G B 506 25.816 143.001 69.739 1.00 36.47 O
ATOM 13 C1' G B 506 25.918 141.780 67.669 1.00 39.66 C
ATOM 14 N9 G B 506 26.480 142.777 66.768 1.00 40.93 N
ATOM 15 C8 G B 506 25.918 143.963 66.371 1.00 41.45 C
ATOM 16 N7 G B 506 26.742 144.719 65.701 1.00 42.23 N
ATOM 17 C5 G B 506 27.903 143.965 65.617 1.00 42.94 C
ATOM 18 C6 G B 506 29.164 144.269 65.039 1.00 42.52 C
ATOM 19 O6 G B 506 29.515 145.302 64.463 1.00 42.92 O
ATOM 20 N1 G B 506 30.068 143.214 65.192 1.00 42.27 N
ATOM 21 C2 G B 506 29.795 142.024 65.820 1.00 42.68 C
ATOM 22 N2 G B 506 30.789 141.135 65.872 1.00 42.59 N
ATOM 23 N3 G B 506 28.628 141.732 66.361 1.00 43.60 N
ATOM 24 C4 G B 506 27.737 142.744 66.231 1.00 42.56 C
ATOM 25 P A B 507 24.920 140.471 71.639 1.00 38.79 P
ATOM 26 OP1 A B 507 23.468 140.550 71.911 1.00 38.99 O
ATOM 27 OP2 A B 507 25.824 141.489 72.224 1.00 38.51 O
ATOM 28 O5' A B 507 25.315 138.992 72.032 1.00 38.14 O
TER
Atoms:
OP1: (36.216,148.437,72.415)
OP2: (33.775,148.271,71.668)
C3': (35.374,143.608,71.932)
C1': (33.505,143.033,73.233)
C5': (35.956,145.584,73.330)
O6: (28.015,144.675,71.751)
O4': (34.270,143.987,73.958)
C8: (32.228,144.950,72.168)
C2: (29.483,141.671,72.950)
C6: (28.902,143.895,72.102)
C5: (30.275,144.135,72.178)
C4: (31.091,143.146,72.653)
P: (34.865,147.892,72.606)
C4': (35.581,144.129,73.341)
C2': (34.365,142.485,72.102)
O2': (34.926,141.260,72.483)
N1: (28.582,142.602,72.511)
N2: (28.980,140.469,73.288)
N3: (30.771,141.900,73.047)
N7: (31.008,145.266,71.852)
N9: (32.330,143.689,72.694)
O5': (34.941,146.305,72.616)
O3': (36.600,143.178,71.403)
OP2: (33.775,148.271,71.668)
C3': (35.374,143.608,71.932)
C1': (33.505,143.033,73.233)
C5': (35.956,145.584,73.330)
O6: (28.015,144.675,71.751)
O4': (34.270,143.987,73.958)
C8: (32.228,144.950,72.168)
C2: (29.483,141.671,72.950)
C6: (28.902,143.895,72.102)
C5: (30.275,144.135,72.178)
C4: (31.091,143.146,72.653)
P: (34.865,147.892,72.606)
C4': (35.581,144.129,73.341)
C2': (34.365,142.485,72.102)
O2': (34.926,141.260,72.483)
N1: (28.582,142.602,72.511)
N2: (28.980,140.469,73.288)
N3: (30.771,141.900,73.047)
N7: (31.008,145.266,71.852)
N9: (32.330,143.689,72.694)
O5': (34.941,146.305,72.616)
O3': (36.600,143.178,71.403)
OP1: (19.762,141.169,66.917)
OP2: (20.806,143.390,66.170)
C3': (24.294,141.137,69.219)
C1': (25.918,141.780,67.669)
C5': (22.736,140.319,67.367)
O6: (29.515,145.302,64.463)
O4': (25.058,140.920,66.971)
C8: (25.918,143.963,66.371)
C2: (29.795,142.024,65.820)
C6: (29.164,144.269,65.039)
C5: (27.903,143.965,65.617)
C4: (27.737,142.744,66.231)
P: (20.918,141.929,66.367)
C4': (24.131,140.335,67.932)
C2': (25.027,142.381,68.747)
O2': (25.816,143.001,69.739)
N1: (30.068,143.214,65.192)
N2: (30.789,141.135,65.872)
N3: (28.628,141.732,66.361)
N7: (26.742,144.719,65.701)
N9: (26.480,142.777,66.768)
O5': (22.237,141.650,67.215)
O3': (25.160,140.434,70.066)
OP2: (20.806,143.390,66.170)
C3': (24.294,141.137,69.219)
C1': (25.918,141.780,67.669)
C5': (22.736,140.319,67.367)
O6: (29.515,145.302,64.463)
O4': (25.058,140.920,66.971)
C8: (25.918,143.963,66.371)
C2: (29.795,142.024,65.820)
C6: (29.164,144.269,65.039)
C5: (27.903,143.965,65.617)
C4: (27.737,142.744,66.231)
P: (20.918,141.929,66.367)
C4': (24.131,140.335,67.932)
C2': (25.027,142.381,68.747)
O2': (25.816,143.001,69.739)
N1: (30.068,143.214,65.192)
N2: (30.789,141.135,65.872)
N3: (28.628,141.732,66.361)
N7: (26.742,144.719,65.701)
N9: (26.480,142.777,66.768)
O5': (22.237,141.650,67.215)
O3': (25.160,140.434,70.066)
Image (generated by PyMOL):