Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1H:A487:A484
Extra
PDB:
ATOM 1 O3' G A 486 -48.885 -55.312 37.192 1.00 19.34 O
ATOM 2 P A A 487 -49.212 -56.639 38.039 1.00 23.35 P
ATOM 3 OP1 A A 487 -48.355 -56.635 39.252 1.00 22.72 O
ATOM 4 OP2 A A 487 -49.258 -57.788 37.091 1.00 27.49 O
ATOM 5 O5' A A 487 -50.683 -56.382 38.575 1.00 25.32 O
ATOM 6 C5' A A 487 -50.769 -55.773 39.837 1.00 24.85 C
ATOM 7 C4' A A 487 -52.147 -55.183 40.061 1.00 22.54 C
ATOM 8 O4' A A 487 -52.501 -54.275 38.980 1.00 16.65 O
ATOM 9 C3' A A 487 -53.282 -56.193 40.139 1.00 20.84 C
ATOM 10 O3' A A 487 -53.379 -56.704 41.443 1.00 17.02 O
ATOM 11 C2' A A 487 -54.449 -55.262 39.894 1.00 22.33 C
ATOM 12 O2' A A 487 -54.761 -54.503 41.047 1.00 21.29 O
ATOM 13 C1' A A 487 -53.896 -54.368 38.786 1.00 21.55 C
ATOM 14 N9 A A 487 -54.094 -54.947 37.465 1.00 32.20 N
ATOM 15 C8 A A 487 -53.393 -55.989 36.929 1.00 35.64 C
ATOM 16 N7 A A 487 -53.779 -56.306 35.717 1.00 42.42 N
ATOM 17 C5 A A 487 -54.793 -55.419 35.435 1.00 30.60 C
ATOM 18 C6 A A 487 -55.594 -55.251 34.306 1.00 27.05 C
ATOM 19 N6 A A 487 -55.499 -56.003 33.207 1.00 39.63 N
ATOM 20 N1 A A 487 -56.509 -54.278 34.355 1.00 25.19 N
ATOM 21 C2 A A 487 -56.609 -53.540 35.460 1.00 31.87 C
ATOM 22 N3 A A 487 -55.914 -53.604 36.587 1.00 36.37 N
ATOM 23 C4 A A 487 -55.008 -54.577 36.503 1.00 33.07 C
ATOM 24 P G A 488 -52.999 -58.228 41.758 1.00 26.14 P
ATOM 25 OP1 G A 488 -53.094 -58.405 43.237 1.00 25.26 O
ATOM 26 OP2 G A 488 -51.753 -58.578 41.041 1.00 39.93 O
ATOM 27 O5' G A 488 -54.107 -59.081 40.976 1.00 29.15 O
TER
ATOM 1 O3' C B 483 -51.688 -62.793 25.702 1.00 28.90 O
ATOM 2 P G B 484 -50.645 -61.598 25.488 1.00 22.22 P
ATOM 3 OP1 G B 484 -50.983 -61.009 24.146 1.00 16.84 O
ATOM 4 OP2 G B 484 -49.271 -62.138 25.777 1.00 26.65 O
ATOM 5 O5' G B 484 -50.998 -60.577 26.695 1.00 13.98 O
ATOM 6 C5' G B 484 -52.039 -59.667 26.496 1.00 20.22 C
ATOM 7 C4' G B 484 -52.433 -59.012 27.795 1.00 17.62 C
ATOM 8 O4' G B 484 -52.421 -59.949 28.883 1.00 13.70 O
ATOM 9 C3' G B 484 -51.460 -57.986 28.310 1.00 19.84 C
ATOM 10 O3' G B 484 -51.506 -56.825 27.501 1.00 12.10 O
ATOM 11 C2' G B 484 -52.045 -57.762 29.692 1.00 21.91 C
ATOM 12 O2' G B 484 -53.193 -56.946 29.625 1.00 29.70 O
ATOM 13 C1' G B 484 -52.355 -59.210 30.091 1.00 21.88 C
ATOM 14 N9 G B 484 -51.242 -59.743 30.855 1.00 29.25 N
ATOM 15 C8 G B 484 -50.258 -60.574 30.369 1.00 33.93 C
ATOM 16 N7 G B 484 -49.353 -60.887 31.254 1.00 36.21 N
ATOM 17 C5 G B 484 -49.756 -60.214 32.393 1.00 35.15 C
ATOM 18 C6 G B 484 -49.146 -60.180 33.662 1.00 41.46 C
ATOM 19 O6 G B 484 -48.115 -60.753 34.038 1.00 60.45 O
ATOM 20 N1 G B 484 -49.857 -59.375 34.536 1.00 36.74 N
ATOM 21 C2 G B 484 -51.006 -58.704 34.220 1.00 36.91 C
ATOM 22 N2 G B 484 -51.514 -57.997 35.234 1.00 44.39 N
ATOM 23 N3 G B 484 -51.602 -58.724 33.031 1.00 32.78 N
ATOM 24 C4 G B 484 -50.914 -59.499 32.169 1.00 34.91 C
ATOM 25 P U B 485 -50.094 -56.361 26.882 1.00 28.89 P
ATOM 26 OP1 U B 485 -50.356 -55.299 25.874 1.00 32.91 O
ATOM 27 OP2 U B 485 -49.367 -57.590 26.456 1.00 39.72 O
ATOM 28 O5' U B 485 -49.359 -55.737 28.181 1.00 37.14 O
TER
ATOM 2 P A A 487 -49.212 -56.639 38.039 1.00 23.35 P
ATOM 3 OP1 A A 487 -48.355 -56.635 39.252 1.00 22.72 O
ATOM 4 OP2 A A 487 -49.258 -57.788 37.091 1.00 27.49 O
ATOM 5 O5' A A 487 -50.683 -56.382 38.575 1.00 25.32 O
ATOM 6 C5' A A 487 -50.769 -55.773 39.837 1.00 24.85 C
ATOM 7 C4' A A 487 -52.147 -55.183 40.061 1.00 22.54 C
ATOM 8 O4' A A 487 -52.501 -54.275 38.980 1.00 16.65 O
ATOM 9 C3' A A 487 -53.282 -56.193 40.139 1.00 20.84 C
ATOM 10 O3' A A 487 -53.379 -56.704 41.443 1.00 17.02 O
ATOM 11 C2' A A 487 -54.449 -55.262 39.894 1.00 22.33 C
ATOM 12 O2' A A 487 -54.761 -54.503 41.047 1.00 21.29 O
ATOM 13 C1' A A 487 -53.896 -54.368 38.786 1.00 21.55 C
ATOM 14 N9 A A 487 -54.094 -54.947 37.465 1.00 32.20 N
ATOM 15 C8 A A 487 -53.393 -55.989 36.929 1.00 35.64 C
ATOM 16 N7 A A 487 -53.779 -56.306 35.717 1.00 42.42 N
ATOM 17 C5 A A 487 -54.793 -55.419 35.435 1.00 30.60 C
ATOM 18 C6 A A 487 -55.594 -55.251 34.306 1.00 27.05 C
ATOM 19 N6 A A 487 -55.499 -56.003 33.207 1.00 39.63 N
ATOM 20 N1 A A 487 -56.509 -54.278 34.355 1.00 25.19 N
ATOM 21 C2 A A 487 -56.609 -53.540 35.460 1.00 31.87 C
ATOM 22 N3 A A 487 -55.914 -53.604 36.587 1.00 36.37 N
ATOM 23 C4 A A 487 -55.008 -54.577 36.503 1.00 33.07 C
ATOM 24 P G A 488 -52.999 -58.228 41.758 1.00 26.14 P
ATOM 25 OP1 G A 488 -53.094 -58.405 43.237 1.00 25.26 O
ATOM 26 OP2 G A 488 -51.753 -58.578 41.041 1.00 39.93 O
ATOM 27 O5' G A 488 -54.107 -59.081 40.976 1.00 29.15 O
TER
ATOM 1 O3' C B 483 -51.688 -62.793 25.702 1.00 28.90 O
ATOM 2 P G B 484 -50.645 -61.598 25.488 1.00 22.22 P
ATOM 3 OP1 G B 484 -50.983 -61.009 24.146 1.00 16.84 O
ATOM 4 OP2 G B 484 -49.271 -62.138 25.777 1.00 26.65 O
ATOM 5 O5' G B 484 -50.998 -60.577 26.695 1.00 13.98 O
ATOM 6 C5' G B 484 -52.039 -59.667 26.496 1.00 20.22 C
ATOM 7 C4' G B 484 -52.433 -59.012 27.795 1.00 17.62 C
ATOM 8 O4' G B 484 -52.421 -59.949 28.883 1.00 13.70 O
ATOM 9 C3' G B 484 -51.460 -57.986 28.310 1.00 19.84 C
ATOM 10 O3' G B 484 -51.506 -56.825 27.501 1.00 12.10 O
ATOM 11 C2' G B 484 -52.045 -57.762 29.692 1.00 21.91 C
ATOM 12 O2' G B 484 -53.193 -56.946 29.625 1.00 29.70 O
ATOM 13 C1' G B 484 -52.355 -59.210 30.091 1.00 21.88 C
ATOM 14 N9 G B 484 -51.242 -59.743 30.855 1.00 29.25 N
ATOM 15 C8 G B 484 -50.258 -60.574 30.369 1.00 33.93 C
ATOM 16 N7 G B 484 -49.353 -60.887 31.254 1.00 36.21 N
ATOM 17 C5 G B 484 -49.756 -60.214 32.393 1.00 35.15 C
ATOM 18 C6 G B 484 -49.146 -60.180 33.662 1.00 41.46 C
ATOM 19 O6 G B 484 -48.115 -60.753 34.038 1.00 60.45 O
ATOM 20 N1 G B 484 -49.857 -59.375 34.536 1.00 36.74 N
ATOM 21 C2 G B 484 -51.006 -58.704 34.220 1.00 36.91 C
ATOM 22 N2 G B 484 -51.514 -57.997 35.234 1.00 44.39 N
ATOM 23 N3 G B 484 -51.602 -58.724 33.031 1.00 32.78 N
ATOM 24 C4 G B 484 -50.914 -59.499 32.169 1.00 34.91 C
ATOM 25 P U B 485 -50.094 -56.361 26.882 1.00 28.89 P
ATOM 26 OP1 U B 485 -50.356 -55.299 25.874 1.00 32.91 O
ATOM 27 OP2 U B 485 -49.367 -57.590 26.456 1.00 39.72 O
ATOM 28 O5' U B 485 -49.359 -55.737 28.181 1.00 37.14 O
TER
Atoms:
OP1: (-48.355,-56.635,39.252)
OP2: (-49.258,-57.788,37.091)
C3': (-53.282,-56.193,40.139)
C1': (-53.896,-54.368,38.786)
C5': (-50.769,-55.773,39.837)
O4': (-52.501,-54.275,38.980)
C8: (-53.393,-55.989,36.929)
O2': (-54.761,-54.503,41.047)
C6: (-55.594,-55.251,34.306)
C5: (-54.793,-55.419,35.435)
C4: (-55.008,-54.577,36.503)
P: (-49.212,-56.639,38.039)
C4': (-52.147,-55.183,40.061)
C2': (-54.449,-55.262,39.894)
C2: (-56.609,-53.540,35.460)
N1: (-56.509,-54.278,34.355)
N3: (-55.914,-53.604,36.587)
N6: (-55.499,-56.003,33.207)
N7: (-53.779,-56.306,35.717)
N9: (-54.094,-54.947,37.465)
O5': (-50.683,-56.382,38.575)
O3': (-53.379,-56.704,41.443)
OP2: (-49.258,-57.788,37.091)
C3': (-53.282,-56.193,40.139)
C1': (-53.896,-54.368,38.786)
C5': (-50.769,-55.773,39.837)
O4': (-52.501,-54.275,38.980)
C8: (-53.393,-55.989,36.929)
O2': (-54.761,-54.503,41.047)
C6: (-55.594,-55.251,34.306)
C5: (-54.793,-55.419,35.435)
C4: (-55.008,-54.577,36.503)
P: (-49.212,-56.639,38.039)
C4': (-52.147,-55.183,40.061)
C2': (-54.449,-55.262,39.894)
C2: (-56.609,-53.540,35.460)
N1: (-56.509,-54.278,34.355)
N3: (-55.914,-53.604,36.587)
N6: (-55.499,-56.003,33.207)
N7: (-53.779,-56.306,35.717)
N9: (-54.094,-54.947,37.465)
O5': (-50.683,-56.382,38.575)
O3': (-53.379,-56.704,41.443)
OP1: (-50.983,-61.009,24.146)
OP2: (-49.271,-62.138,25.777)
C3': (-51.460,-57.986,28.310)
C1': (-52.355,-59.210,30.091)
C5': (-52.039,-59.667,26.496)
O6: (-48.115,-60.753,34.038)
O4': (-52.421,-59.949,28.883)
C8: (-50.258,-60.574,30.369)
C2: (-51.006,-58.704,34.220)
C6: (-49.146,-60.180,33.662)
C5: (-49.756,-60.214,32.393)
C4: (-50.914,-59.499,32.169)
P: (-50.645,-61.598,25.488)
C4': (-52.433,-59.012,27.795)
C2': (-52.045,-57.762,29.692)
O2': (-53.193,-56.946,29.625)
N1: (-49.857,-59.375,34.536)
N2: (-51.514,-57.997,35.234)
N3: (-51.602,-58.724,33.031)
N7: (-49.353,-60.887,31.254)
N9: (-51.242,-59.743,30.855)
O5': (-50.998,-60.577,26.695)
O3': (-51.506,-56.825,27.501)
OP2: (-49.271,-62.138,25.777)
C3': (-51.460,-57.986,28.310)
C1': (-52.355,-59.210,30.091)
C5': (-52.039,-59.667,26.496)
O6: (-48.115,-60.753,34.038)
O4': (-52.421,-59.949,28.883)
C8: (-50.258,-60.574,30.369)
C2: (-51.006,-58.704,34.220)
C6: (-49.146,-60.180,33.662)
C5: (-49.756,-60.214,32.393)
C4: (-50.914,-59.499,32.169)
P: (-50.645,-61.598,25.488)
C4': (-52.433,-59.012,27.795)
C2': (-52.045,-57.762,29.692)
O2': (-53.193,-56.946,29.625)
N1: (-49.857,-59.375,34.536)
N2: (-51.514,-57.997,35.234)
N3: (-51.602,-58.724,33.031)
N7: (-49.353,-60.887,31.254)
N9: (-51.242,-59.743,30.855)
O5': (-50.998,-60.577,26.695)
O3': (-51.506,-56.825,27.501)
Image (generated by PyMOL):