Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5H:52720:52717
Extra
PDB:
ATOM 1 O3' G A2719 173.001 -10.288 219.622 1.00 41.32 O
ATOM 2 P A A2720 172.700 -8.786 220.078 1.00 37.66 P
ATOM 3 OP1 A A2720 173.449 -7.905 219.150 1.00 37.83 O
ATOM 4 OP2 A A2720 172.978 -8.693 221.501 1.00 37.41 O
ATOM 5 O5' A A2720 171.136 -8.654 219.832 1.00 37.55 O
ATOM 6 C5' A A2720 170.539 -9.032 218.591 1.00 37.78 C
ATOM 7 C4' A A2720 169.071 -9.283 218.747 1.00 37.65 C
ATOM 8 O4' A A2720 168.886 -10.546 219.415 1.00 37.64 O
ATOM 9 C3' A A2720 168.305 -8.268 219.605 1.00 37.31 C
ATOM 10 O3' A A2720 167.850 -7.135 218.856 1.00 37.31 O
ATOM 11 C2' A A2720 167.174 -9.088 220.235 1.00 37.19 C
ATOM 12 O2' A A2720 166.001 -9.036 219.449 1.00 37.25 O
ATOM 13 C1' A A2720 167.724 -10.520 220.212 1.00 37.39 C
ATOM 14 N9 A A2720 168.076 -10.983 221.557 1.00 37.21 N
ATOM 15 C8 A A2720 169.062 -10.482 222.334 1.00 37.09 C
ATOM 16 N7 A A2720 169.116 -11.080 223.494 1.00 36.95 N
ATOM 17 C5 A A2720 168.126 -12.012 223.490 1.00 36.98 C
ATOM 18 C6 A A2720 167.693 -12.928 224.444 1.00 36.89 C
ATOM 19 N6 A A2720 168.211 -13.118 225.640 1.00 36.75 N
ATOM 20 N1 A A2720 166.661 -13.714 224.107 1.00 36.97 N
ATOM 21 C2 A A2720 166.112 -13.581 222.894 1.00 37.13 C
ATOM 22 N3 A A2720 166.442 -12.740 221.915 1.00 37.23 N
ATOM 23 C4 A A2720 167.466 -11.958 222.295 1.00 37.14 C
ATOM 24 P G A2721 167.668 -5.702 219.574 1.00 37.12 P
ATOM 25 OP1 G A2721 167.081 -4.804 218.610 1.00 37.19 O
ATOM 26 OP2 G A2721 168.945 -5.350 220.158 1.00 37.08 O
ATOM 27 O5' G A2721 166.625 -6.002 220.715 1.00 36.85 O
TER
ATOM 1 O3' C B2716 176.300 -12.331 232.932 1.00 46.83 O
ATOM 2 P G B2717 177.172 -13.298 232.003 1.00 43.70 P
ATOM 3 OP1 G B2717 177.318 -14.563 232.745 1.00 43.78 O
ATOM 4 OP2 G B2717 178.368 -12.572 231.596 1.00 43.80 O
ATOM 5 O5' G B2717 176.262 -13.514 230.737 1.00 43.79 O
ATOM 6 C5' G B2717 174.983 -14.084 230.856 1.00 43.71 C
ATOM 7 C4' G B2717 174.199 -13.921 229.600 1.00 43.78 C
ATOM 8 O4' G B2717 173.825 -12.540 229.422 1.00 43.60 O
ATOM 9 C3' G B2717 174.898 -14.245 228.299 1.00 44.09 C
ATOM 10 O3' G B2717 175.067 -15.624 228.092 1.00 44.32 O
ATOM 11 C2' G B2717 173.951 -13.598 227.303 1.00 44.06 C
ATOM 12 O2' G B2717 172.780 -14.377 227.134 1.00 44.07 O
ATOM 13 C1' G B2717 173.566 -12.318 228.048 1.00 43.75 C
ATOM 14 N9 G B2717 174.385 -11.229 227.563 1.00 43.78 N
ATOM 15 C8 G B2717 175.631 -10.872 227.981 1.00 43.81 C
ATOM 16 N7 G B2717 176.113 -9.946 227.200 1.00 43.88 N
ATOM 17 C5 G B2717 175.160 -9.745 226.195 1.00 43.92 C
ATOM 18 C6 G B2717 175.148 -8.886 225.073 1.00 44.01 C
ATOM 19 O6 G B2717 176.013 -8.095 224.737 1.00 44.09 O
ATOM 20 N1 G B2717 174.005 -8.981 224.307 1.00 44.03 N
ATOM 21 C2 G B2717 172.990 -9.828 224.613 1.00 43.97 C
ATOM 22 N2 G B2717 171.968 -9.792 223.764 1.00 44.01 N
ATOM 23 N3 G B2717 172.962 -10.636 225.657 1.00 43.88 N
ATOM 24 C4 G B2717 174.087 -10.559 226.396 1.00 43.86 C
ATOM 25 P U B2718 176.431 -16.234 227.449 1.00 41.77 P
ATOM 26 OP1 U B2718 176.185 -17.703 227.292 1.00 41.97 O
ATOM 27 OP2 U B2718 177.568 -15.778 228.295 1.00 41.71 O
ATOM 28 O5' U B2718 176.524 -15.556 226.012 1.00 41.92 O
TER
ATOM 2 P A A2720 172.700 -8.786 220.078 1.00 37.66 P
ATOM 3 OP1 A A2720 173.449 -7.905 219.150 1.00 37.83 O
ATOM 4 OP2 A A2720 172.978 -8.693 221.501 1.00 37.41 O
ATOM 5 O5' A A2720 171.136 -8.654 219.832 1.00 37.55 O
ATOM 6 C5' A A2720 170.539 -9.032 218.591 1.00 37.78 C
ATOM 7 C4' A A2720 169.071 -9.283 218.747 1.00 37.65 C
ATOM 8 O4' A A2720 168.886 -10.546 219.415 1.00 37.64 O
ATOM 9 C3' A A2720 168.305 -8.268 219.605 1.00 37.31 C
ATOM 10 O3' A A2720 167.850 -7.135 218.856 1.00 37.31 O
ATOM 11 C2' A A2720 167.174 -9.088 220.235 1.00 37.19 C
ATOM 12 O2' A A2720 166.001 -9.036 219.449 1.00 37.25 O
ATOM 13 C1' A A2720 167.724 -10.520 220.212 1.00 37.39 C
ATOM 14 N9 A A2720 168.076 -10.983 221.557 1.00 37.21 N
ATOM 15 C8 A A2720 169.062 -10.482 222.334 1.00 37.09 C
ATOM 16 N7 A A2720 169.116 -11.080 223.494 1.00 36.95 N
ATOM 17 C5 A A2720 168.126 -12.012 223.490 1.00 36.98 C
ATOM 18 C6 A A2720 167.693 -12.928 224.444 1.00 36.89 C
ATOM 19 N6 A A2720 168.211 -13.118 225.640 1.00 36.75 N
ATOM 20 N1 A A2720 166.661 -13.714 224.107 1.00 36.97 N
ATOM 21 C2 A A2720 166.112 -13.581 222.894 1.00 37.13 C
ATOM 22 N3 A A2720 166.442 -12.740 221.915 1.00 37.23 N
ATOM 23 C4 A A2720 167.466 -11.958 222.295 1.00 37.14 C
ATOM 24 P G A2721 167.668 -5.702 219.574 1.00 37.12 P
ATOM 25 OP1 G A2721 167.081 -4.804 218.610 1.00 37.19 O
ATOM 26 OP2 G A2721 168.945 -5.350 220.158 1.00 37.08 O
ATOM 27 O5' G A2721 166.625 -6.002 220.715 1.00 36.85 O
TER
ATOM 1 O3' C B2716 176.300 -12.331 232.932 1.00 46.83 O
ATOM 2 P G B2717 177.172 -13.298 232.003 1.00 43.70 P
ATOM 3 OP1 G B2717 177.318 -14.563 232.745 1.00 43.78 O
ATOM 4 OP2 G B2717 178.368 -12.572 231.596 1.00 43.80 O
ATOM 5 O5' G B2717 176.262 -13.514 230.737 1.00 43.79 O
ATOM 6 C5' G B2717 174.983 -14.084 230.856 1.00 43.71 C
ATOM 7 C4' G B2717 174.199 -13.921 229.600 1.00 43.78 C
ATOM 8 O4' G B2717 173.825 -12.540 229.422 1.00 43.60 O
ATOM 9 C3' G B2717 174.898 -14.245 228.299 1.00 44.09 C
ATOM 10 O3' G B2717 175.067 -15.624 228.092 1.00 44.32 O
ATOM 11 C2' G B2717 173.951 -13.598 227.303 1.00 44.06 C
ATOM 12 O2' G B2717 172.780 -14.377 227.134 1.00 44.07 O
ATOM 13 C1' G B2717 173.566 -12.318 228.048 1.00 43.75 C
ATOM 14 N9 G B2717 174.385 -11.229 227.563 1.00 43.78 N
ATOM 15 C8 G B2717 175.631 -10.872 227.981 1.00 43.81 C
ATOM 16 N7 G B2717 176.113 -9.946 227.200 1.00 43.88 N
ATOM 17 C5 G B2717 175.160 -9.745 226.195 1.00 43.92 C
ATOM 18 C6 G B2717 175.148 -8.886 225.073 1.00 44.01 C
ATOM 19 O6 G B2717 176.013 -8.095 224.737 1.00 44.09 O
ATOM 20 N1 G B2717 174.005 -8.981 224.307 1.00 44.03 N
ATOM 21 C2 G B2717 172.990 -9.828 224.613 1.00 43.97 C
ATOM 22 N2 G B2717 171.968 -9.792 223.764 1.00 44.01 N
ATOM 23 N3 G B2717 172.962 -10.636 225.657 1.00 43.88 N
ATOM 24 C4 G B2717 174.087 -10.559 226.396 1.00 43.86 C
ATOM 25 P U B2718 176.431 -16.234 227.449 1.00 41.77 P
ATOM 26 OP1 U B2718 176.185 -17.703 227.292 1.00 41.97 O
ATOM 27 OP2 U B2718 177.568 -15.778 228.295 1.00 41.71 O
ATOM 28 O5' U B2718 176.524 -15.556 226.012 1.00 41.92 O
TER
Atoms:
OP1: (173.449,-7.905,219.150)
OP2: (172.978,-8.693,221.501)
C3': (168.305,-8.268,219.605)
C1': (167.724,-10.520,220.212)
C5': (170.539,-9.032,218.591)
O4': (168.886,-10.546,219.415)
C8: (169.062,-10.482,222.334)
O2': (166.001,-9.036,219.449)
C6: (167.693,-12.928,224.444)
C5: (168.126,-12.012,223.490)
C4: (167.466,-11.958,222.295)
P: (172.700,-8.786,220.078)
C4': (169.071,-9.283,218.747)
C2': (167.174,-9.088,220.235)
C2: (166.112,-13.581,222.894)
N1: (166.661,-13.714,224.107)
N3: (166.442,-12.740,221.915)
N6: (168.211,-13.118,225.640)
N7: (169.116,-11.080,223.494)
N9: (168.076,-10.983,221.557)
O5': (171.136,-8.654,219.832)
O3': (167.850,-7.135,218.856)
OP2: (172.978,-8.693,221.501)
C3': (168.305,-8.268,219.605)
C1': (167.724,-10.520,220.212)
C5': (170.539,-9.032,218.591)
O4': (168.886,-10.546,219.415)
C8: (169.062,-10.482,222.334)
O2': (166.001,-9.036,219.449)
C6: (167.693,-12.928,224.444)
C5: (168.126,-12.012,223.490)
C4: (167.466,-11.958,222.295)
P: (172.700,-8.786,220.078)
C4': (169.071,-9.283,218.747)
C2': (167.174,-9.088,220.235)
C2: (166.112,-13.581,222.894)
N1: (166.661,-13.714,224.107)
N3: (166.442,-12.740,221.915)
N6: (168.211,-13.118,225.640)
N7: (169.116,-11.080,223.494)
N9: (168.076,-10.983,221.557)
O5': (171.136,-8.654,219.832)
O3': (167.850,-7.135,218.856)
OP1: (177.318,-14.563,232.745)
OP2: (178.368,-12.572,231.596)
C3': (174.898,-14.245,228.299)
C1': (173.566,-12.318,228.048)
C5': (174.983,-14.084,230.856)
O6: (176.013,-8.095,224.737)
O4': (173.825,-12.540,229.422)
C8: (175.631,-10.872,227.981)
C2: (172.990,-9.828,224.613)
C6: (175.148,-8.886,225.073)
C5: (175.160,-9.745,226.195)
C4: (174.087,-10.559,226.396)
P: (177.172,-13.298,232.003)
C4': (174.199,-13.921,229.600)
C2': (173.951,-13.598,227.303)
O2': (172.780,-14.377,227.134)
N1: (174.005,-8.981,224.307)
N2: (171.968,-9.792,223.764)
N3: (172.962,-10.636,225.657)
N7: (176.113,-9.946,227.200)
N9: (174.385,-11.229,227.563)
O5': (176.262,-13.514,230.737)
O3': (175.067,-15.624,228.092)
OP2: (178.368,-12.572,231.596)
C3': (174.898,-14.245,228.299)
C1': (173.566,-12.318,228.048)
C5': (174.983,-14.084,230.856)
O6: (176.013,-8.095,224.737)
O4': (173.825,-12.540,229.422)
C8: (175.631,-10.872,227.981)
C2: (172.990,-9.828,224.613)
C6: (175.148,-8.886,225.073)
C5: (175.160,-9.745,226.195)
C4: (174.087,-10.559,226.396)
P: (177.172,-13.298,232.003)
C4': (174.199,-13.921,229.600)
C2': (173.951,-13.598,227.303)
O2': (172.780,-14.377,227.134)
N1: (174.005,-8.981,224.307)
N2: (171.968,-9.792,223.764)
N3: (172.962,-10.636,225.657)
N7: (176.113,-9.946,227.200)
N9: (174.385,-11.229,227.563)
O5': (176.262,-13.514,230.737)
O3': (175.067,-15.624,228.092)
Image (generated by PyMOL):