ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2FQN:A16:B5

Extra

PDB:
ATOM 1 O3' A A 15 19.007 -1.064 76.804 1.00 32.53 O
ATOM 2 P A A 16 17.948 -1.307 77.982 1.00 28.96 P
ATOM 3 OP1 A A 16 18.624 -2.037 79.078 1.00 27.61 O
ATOM 4 OP2 A A 16 16.718 -1.856 77.379 1.00 28.88 O
ATOM 5 O5' A A 16 17.612 0.172 78.488 1.00 31.31 O
ATOM 6 C5' A A 16 18.637 1.039 78.977 1.00 28.21 C
ATOM 7 C4' A A 16 18.152 2.474 78.973 1.00 28.98 C
ATOM 8 O4' A A 16 17.665 2.772 77.638 1.00 28.26 O
ATOM 9 C3' A A 16 16.977 2.787 79.891 1.00 27.75 C
ATOM 10 O3' A A 16 17.425 3.177 81.187 1.00 29.26 O
ATOM 11 C2' A A 16 16.312 3.969 79.189 1.00 27.90 C
ATOM 12 O2' A A 16 16.886 5.230 79.497 1.00 26.11 O
ATOM 13 C1' A A 16 16.539 3.621 77.716 1.00 28.18 C
ATOM 14 N9 A A 16 15.400 2.916 77.144 1.00 27.73 N
ATOM 15 C8 A A 16 15.011 1.621 77.373 1.00 27.48 C
ATOM 16 N7 A A 16 13.914 1.282 76.745 1.00 27.37 N
ATOM 17 C5 A A 16 13.563 2.429 76.049 1.00 27.46 C
ATOM 18 C6 A A 16 12.496 2.721 75.199 1.00 26.68 C
ATOM 19 N6 A A 16 11.538 1.849 74.897 1.00 27.73 N
ATOM 20 N1 A A 16 12.445 3.958 74.660 1.00 27.37 N
ATOM 21 C2 A A 16 13.405 4.833 74.970 1.00 24.10 C
ATOM 22 N3 A A 16 14.452 4.679 75.760 1.00 24.17 N
ATOM 23 C4 A A 16 14.475 3.439 76.277 1.00 26.69 C
ATOM 24 P G A 17 16.992 2.323 82.484 1.00 31.38 P
ATOM 25 OP1 G A 17 17.400 3.104 83.676 1.00 31.76 O
ATOM 26 OP2 G A 17 17.482 0.936 82.317 1.00 30.80 O
ATOM 27 O5' G A 17 15.407 2.257 82.436 1.00 30.65 O
TER

ATOM 1 O3' C B 4 6.852 -9.387 74.928 1.00 66.10 O
ATOM 2 P G B 5 7.430 -8.737 73.576 1.00 65.70 P
ATOM 3 OP1 G B 5 6.508 -9.075 72.464 1.00 66.52 O
ATOM 4 OP2 G B 5 8.866 -9.110 73.484 1.00 66.27 O
ATOM 5 O5' G B 5 7.341 -7.161 73.806 1.00 63.87 O
ATOM 6 C5' G B 5 8.087 -6.264 72.984 1.00 58.50 C
ATOM 7 C4' G B 5 8.233 -4.914 73.659 1.00 56.61 C
ATOM 8 O4' G B 5 8.687 -5.089 75.028 1.00 55.76 O
ATOM 9 C3' G B 5 9.263 -3.998 73.013 1.00 54.89 C
ATOM 10 O3' G B 5 8.670 -3.246 71.957 1.00 54.10 O
ATOM 11 C2' G B 5 9.706 -3.113 74.174 1.00 53.56 C
ATOM 12 O2' G B 5 8.830 -2.034 74.417 1.00 52.65 O
ATOM 13 C1' G B 5 9.647 -4.091 75.349 1.00 53.48 C
ATOM 14 N9 G B 5 10.907 -4.765 75.654 1.00 51.62 N
ATOM 15 C8 G B 5 11.131 -6.119 75.603 1.00 51.18 C
ATOM 16 N7 G B 5 12.337 -6.454 75.967 1.00 49.83 N
ATOM 17 C5 G B 5 12.953 -5.249 76.272 1.00 48.58 C
ATOM 18 C6 G B 5 14.263 -4.984 76.735 1.00 47.30 C
ATOM 19 O6 G B 5 15.167 -5.786 76.991 1.00 47.82 O
ATOM 20 N1 G B 5 14.478 -3.625 76.905 1.00 45.42 N
ATOM 21 C2 G B 5 13.554 -2.646 76.670 1.00 46.47 C
ATOM 22 N2 G B 5 13.965 -1.394 76.895 1.00 45.76 N
ATOM 23 N3 G B 5 12.321 -2.878 76.247 1.00 48.26 N
ATOM 24 C4 G B 5 12.090 -4.193 76.070 1.00 49.08 C
ATOM 25 P C B 6 9.541 -2.858 70.665 1.00 52.58 P
ATOM 26 OP1 C B 6 8.620 -2.256 69.669 1.00 51.07 O
ATOM 27 OP2 C B 6 10.353 -4.046 70.293 1.00 52.52 O
ATOM 28 O5' C B 6 10.519 -1.717 71.194 1.00 50.83 O
TER

Atoms:
OP1: (18.624,-2.037,79.078)
OP2: (16.718,-1.856,77.379)
C3': (16.977,2.787,79.891)
C1': (16.539,3.621,77.716)
C5': (18.637,1.039,78.977)
O4': (17.665,2.772,77.638)
C8: (15.011,1.621,77.373)
O2': (16.886,5.230,79.497)
C6: (12.496,2.721,75.199)
C5: (13.563,2.429,76.049)
C4: (14.475,3.439,76.277)
P: (17.948,-1.307,77.982)
C4': (18.152,2.474,78.973)
C2': (16.312,3.969,79.189)
C2: (13.405,4.833,74.970)
N1: (12.445,3.958,74.660)
N3: (14.452,4.679,75.760)
N6: (11.538,1.849,74.897)
N7: (13.914,1.282,76.745)
N9: (15.400,2.916,77.144)
O5': (17.612,0.172,78.488)
O3': (17.425,3.177,81.187)
OP1: (6.508,-9.075,72.464)
OP2: (8.866,-9.110,73.484)
C3': (9.263,-3.998,73.013)
C1': (9.647,-4.091,75.349)
C5': (8.087,-6.264,72.984)
O6: (15.167,-5.786,76.991)
O4': (8.687,-5.089,75.028)
C8: (11.131,-6.119,75.603)
C2: (13.554,-2.646,76.670)
C6: (14.263,-4.984,76.735)
C5: (12.953,-5.249,76.272)
C4: (12.090,-4.193,76.070)
P: (7.430,-8.737,73.576)
C4': (8.233,-4.914,73.659)
C2': (9.706,-3.113,74.174)
O2': (8.830,-2.034,74.417)
N1: (14.478,-3.625,76.905)
N2: (13.965,-1.394,76.895)
N3: (12.321,-2.878,76.247)
N7: (12.337,-6.454,75.967)
N9: (10.907,-4.765,75.654)
O5': (7.341,-7.161,73.806)
O3': (8.670,-3.246,71.957)
Image (generated by PyMOL):
PyMOL image
show in jmol