Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1416:A1485
Extra
PDB:
ATOM 1 O3' G A1415 -20.882 -7.798 45.726 1.00 11.15 O
ATOM 2 P G A1416 -21.208 -8.201 44.204 1.00 6.48 P
ATOM 3 OP1 G A1416 -22.383 -7.379 43.778 1.00 6.48 O
ATOM 4 OP2 G A1416 -21.322 -9.686 44.177 1.00 6.48 O
ATOM 5 O5' G A1416 -19.891 -7.752 43.401 1.00 6.48 O
ATOM 6 C5' G A1416 -19.509 -6.386 43.299 1.00 6.48 C
ATOM 7 C4' G A1416 -18.268 -6.217 42.460 1.00 6.48 C
ATOM 8 O4' G A1416 -17.114 -6.710 43.192 1.00 6.48 O
ATOM 9 C3' G A1416 -18.230 -7.016 41.172 1.00 6.48 C
ATOM 10 O3' G A1416 -18.964 -6.433 40.118 1.00 6.48 O
ATOM 11 C2' G A1416 -16.733 -7.140 40.900 1.00 6.48 C
ATOM 12 O2' G A1416 -16.182 -5.918 40.436 1.00 6.48 O
ATOM 13 C1' G A1416 -16.225 -7.383 42.304 1.00 6.48 C
ATOM 14 N9 G A1416 -16.212 -8.828 42.630 1.00 6.22 N
ATOM 15 C8 G A1416 -17.075 -9.569 43.395 1.00 6.22 C
ATOM 16 N7 G A1416 -16.749 -10.832 43.445 1.00 6.22 N
ATOM 17 C5 G A1416 -15.612 -10.946 42.664 1.00 6.22 C
ATOM 18 C6 G A1416 -14.798 -12.064 42.328 1.00 6.22 C
ATOM 19 O6 G A1416 -14.881 -13.255 42.649 1.00 6.22 O
ATOM 20 N1 G A1416 -13.772 -11.705 41.496 1.00 6.22 N
ATOM 21 C2 G A1416 -13.556 -10.442 41.065 1.00 6.22 C
ATOM 22 N2 G A1416 -12.503 -10.272 40.266 1.00 6.22 N
ATOM 23 N3 G A1416 -14.284 -9.394 41.373 1.00 6.22 N
ATOM 24 C4 G A1416 -15.293 -9.720 42.163 1.00 6.22 C
ATOM 25 P G A1417 -19.349 -7.320 38.839 1.00 1.39 P
ATOM 26 OP1 G A1417 -20.027 -6.416 37.869 1.00 1.39 O
ATOM 27 OP2 G A1417 -20.071 -8.503 39.351 1.00 1.39 O
ATOM 28 O5' G A1417 -17.929 -7.777 38.276 1.00 1.39 O
TER
ATOM 1 O3' G B1484 -25.022 0.814 48.551 1.00 10.66 O
ATOM 2 P G B1485 -24.558 -0.311 49.577 1.00 17.51 P
ATOM 3 OP1 G B1485 -25.774 -0.969 50.097 1.00 17.51 O
ATOM 4 OP2 G B1485 -23.628 0.338 50.545 1.00 17.51 O
ATOM 5 O5' G B1485 -23.776 -1.317 48.633 1.00 17.51 O
ATOM 6 C5' G B1485 -24.471 -2.040 47.638 1.00 17.51 C
ATOM 7 C4' G B1485 -23.612 -3.107 47.030 1.00 17.51 C
ATOM 8 O4' G B1485 -22.706 -2.521 46.062 1.00 17.51 O
ATOM 9 C3' G B1485 -22.700 -3.860 47.982 1.00 17.51 C
ATOM 10 O3' G B1485 -23.379 -4.861 48.704 1.00 17.51 O
ATOM 11 C2' G B1485 -21.648 -4.404 47.037 1.00 17.51 C
ATOM 12 O2' G B1485 -22.148 -5.515 46.312 1.00 17.51 O
ATOM 13 C1' G B1485 -21.480 -3.220 46.079 1.00 17.51 C
ATOM 14 N9 G B1485 -20.457 -2.301 46.567 1.00 17.36 N
ATOM 15 C8 G B1485 -20.745 -1.226 47.337 1.00 17.36 C
ATOM 16 N7 G B1485 -19.678 -0.594 47.692 1.00 17.36 N
ATOM 17 C5 G B1485 -18.631 -1.302 47.138 1.00 17.36 C
ATOM 18 C6 G B1485 -17.241 -1.045 47.218 1.00 17.36 C
ATOM 19 O6 G B1485 -16.670 -0.118 47.825 1.00 17.36 O
ATOM 20 N1 G B1485 -16.540 -2.002 46.503 1.00 17.36 N
ATOM 21 C2 G B1485 -17.136 -3.043 45.833 1.00 17.36 C
ATOM 22 N2 G B1485 -16.294 -3.856 45.207 1.00 17.36 N
ATOM 23 N3 G B1485 -18.427 -3.305 45.758 1.00 17.36 N
ATOM 24 C4 G B1485 -19.105 -2.378 46.435 1.00 17.36 C
ATOM 25 P C B1486 -22.634 -5.685 49.851 1.00 39.59 P
ATOM 26 OP1 C B1486 -21.259 -5.170 49.929 1.00 39.59 O
ATOM 27 OP2 C B1486 -22.854 -7.125 49.564 1.00 39.59 O
ATOM 28 O5' C B1486 -23.436 -5.262 51.143 1.00 39.59 O
TER
ATOM 2 P G A1416 -21.208 -8.201 44.204 1.00 6.48 P
ATOM 3 OP1 G A1416 -22.383 -7.379 43.778 1.00 6.48 O
ATOM 4 OP2 G A1416 -21.322 -9.686 44.177 1.00 6.48 O
ATOM 5 O5' G A1416 -19.891 -7.752 43.401 1.00 6.48 O
ATOM 6 C5' G A1416 -19.509 -6.386 43.299 1.00 6.48 C
ATOM 7 C4' G A1416 -18.268 -6.217 42.460 1.00 6.48 C
ATOM 8 O4' G A1416 -17.114 -6.710 43.192 1.00 6.48 O
ATOM 9 C3' G A1416 -18.230 -7.016 41.172 1.00 6.48 C
ATOM 10 O3' G A1416 -18.964 -6.433 40.118 1.00 6.48 O
ATOM 11 C2' G A1416 -16.733 -7.140 40.900 1.00 6.48 C
ATOM 12 O2' G A1416 -16.182 -5.918 40.436 1.00 6.48 O
ATOM 13 C1' G A1416 -16.225 -7.383 42.304 1.00 6.48 C
ATOM 14 N9 G A1416 -16.212 -8.828 42.630 1.00 6.22 N
ATOM 15 C8 G A1416 -17.075 -9.569 43.395 1.00 6.22 C
ATOM 16 N7 G A1416 -16.749 -10.832 43.445 1.00 6.22 N
ATOM 17 C5 G A1416 -15.612 -10.946 42.664 1.00 6.22 C
ATOM 18 C6 G A1416 -14.798 -12.064 42.328 1.00 6.22 C
ATOM 19 O6 G A1416 -14.881 -13.255 42.649 1.00 6.22 O
ATOM 20 N1 G A1416 -13.772 -11.705 41.496 1.00 6.22 N
ATOM 21 C2 G A1416 -13.556 -10.442 41.065 1.00 6.22 C
ATOM 22 N2 G A1416 -12.503 -10.272 40.266 1.00 6.22 N
ATOM 23 N3 G A1416 -14.284 -9.394 41.373 1.00 6.22 N
ATOM 24 C4 G A1416 -15.293 -9.720 42.163 1.00 6.22 C
ATOM 25 P G A1417 -19.349 -7.320 38.839 1.00 1.39 P
ATOM 26 OP1 G A1417 -20.027 -6.416 37.869 1.00 1.39 O
ATOM 27 OP2 G A1417 -20.071 -8.503 39.351 1.00 1.39 O
ATOM 28 O5' G A1417 -17.929 -7.777 38.276 1.00 1.39 O
TER
ATOM 1 O3' G B1484 -25.022 0.814 48.551 1.00 10.66 O
ATOM 2 P G B1485 -24.558 -0.311 49.577 1.00 17.51 P
ATOM 3 OP1 G B1485 -25.774 -0.969 50.097 1.00 17.51 O
ATOM 4 OP2 G B1485 -23.628 0.338 50.545 1.00 17.51 O
ATOM 5 O5' G B1485 -23.776 -1.317 48.633 1.00 17.51 O
ATOM 6 C5' G B1485 -24.471 -2.040 47.638 1.00 17.51 C
ATOM 7 C4' G B1485 -23.612 -3.107 47.030 1.00 17.51 C
ATOM 8 O4' G B1485 -22.706 -2.521 46.062 1.00 17.51 O
ATOM 9 C3' G B1485 -22.700 -3.860 47.982 1.00 17.51 C
ATOM 10 O3' G B1485 -23.379 -4.861 48.704 1.00 17.51 O
ATOM 11 C2' G B1485 -21.648 -4.404 47.037 1.00 17.51 C
ATOM 12 O2' G B1485 -22.148 -5.515 46.312 1.00 17.51 O
ATOM 13 C1' G B1485 -21.480 -3.220 46.079 1.00 17.51 C
ATOM 14 N9 G B1485 -20.457 -2.301 46.567 1.00 17.36 N
ATOM 15 C8 G B1485 -20.745 -1.226 47.337 1.00 17.36 C
ATOM 16 N7 G B1485 -19.678 -0.594 47.692 1.00 17.36 N
ATOM 17 C5 G B1485 -18.631 -1.302 47.138 1.00 17.36 C
ATOM 18 C6 G B1485 -17.241 -1.045 47.218 1.00 17.36 C
ATOM 19 O6 G B1485 -16.670 -0.118 47.825 1.00 17.36 O
ATOM 20 N1 G B1485 -16.540 -2.002 46.503 1.00 17.36 N
ATOM 21 C2 G B1485 -17.136 -3.043 45.833 1.00 17.36 C
ATOM 22 N2 G B1485 -16.294 -3.856 45.207 1.00 17.36 N
ATOM 23 N3 G B1485 -18.427 -3.305 45.758 1.00 17.36 N
ATOM 24 C4 G B1485 -19.105 -2.378 46.435 1.00 17.36 C
ATOM 25 P C B1486 -22.634 -5.685 49.851 1.00 39.59 P
ATOM 26 OP1 C B1486 -21.259 -5.170 49.929 1.00 39.59 O
ATOM 27 OP2 C B1486 -22.854 -7.125 49.564 1.00 39.59 O
ATOM 28 O5' C B1486 -23.436 -5.262 51.143 1.00 39.59 O
TER
Atoms:
OP1: (-22.383,-7.379,43.778)
OP2: (-21.322,-9.686,44.177)
C3': (-18.230,-7.016,41.172)
C1': (-16.225,-7.383,42.304)
C5': (-19.509,-6.386,43.299)
O6: (-14.881,-13.255,42.649)
O4': (-17.114,-6.710,43.192)
C8: (-17.075,-9.569,43.395)
C2: (-13.556,-10.442,41.065)
C6: (-14.798,-12.064,42.328)
C5: (-15.612,-10.946,42.664)
C4: (-15.293,-9.720,42.163)
P: (-21.208,-8.201,44.204)
C4': (-18.268,-6.217,42.460)
C2': (-16.733,-7.140,40.900)
O2': (-16.182,-5.918,40.436)
N1: (-13.772,-11.705,41.496)
N2: (-12.503,-10.272,40.266)
N3: (-14.284,-9.394,41.373)
N7: (-16.749,-10.832,43.445)
N9: (-16.212,-8.828,42.630)
O5': (-19.891,-7.752,43.401)
O3': (-18.964,-6.433,40.118)
OP2: (-21.322,-9.686,44.177)
C3': (-18.230,-7.016,41.172)
C1': (-16.225,-7.383,42.304)
C5': (-19.509,-6.386,43.299)
O6: (-14.881,-13.255,42.649)
O4': (-17.114,-6.710,43.192)
C8: (-17.075,-9.569,43.395)
C2: (-13.556,-10.442,41.065)
C6: (-14.798,-12.064,42.328)
C5: (-15.612,-10.946,42.664)
C4: (-15.293,-9.720,42.163)
P: (-21.208,-8.201,44.204)
C4': (-18.268,-6.217,42.460)
C2': (-16.733,-7.140,40.900)
O2': (-16.182,-5.918,40.436)
N1: (-13.772,-11.705,41.496)
N2: (-12.503,-10.272,40.266)
N3: (-14.284,-9.394,41.373)
N7: (-16.749,-10.832,43.445)
N9: (-16.212,-8.828,42.630)
O5': (-19.891,-7.752,43.401)
O3': (-18.964,-6.433,40.118)
OP1: (-25.774,-0.969,50.097)
OP2: (-23.628,0.338,50.545)
C3': (-22.700,-3.860,47.982)
C1': (-21.480,-3.220,46.079)
C5': (-24.471,-2.040,47.638)
O6: (-16.670,-0.118,47.825)
O4': (-22.706,-2.521,46.062)
C8: (-20.745,-1.226,47.337)
C2: (-17.136,-3.043,45.833)
C6: (-17.241,-1.045,47.218)
C5: (-18.631,-1.302,47.138)
C4: (-19.105,-2.378,46.435)
P: (-24.558,-0.311,49.577)
C4': (-23.612,-3.107,47.030)
C2': (-21.648,-4.404,47.037)
O2': (-22.148,-5.515,46.312)
N1: (-16.540,-2.002,46.503)
N2: (-16.294,-3.856,45.207)
N3: (-18.427,-3.305,45.758)
N7: (-19.678,-0.594,47.692)
N9: (-20.457,-2.301,46.567)
O5': (-23.776,-1.317,48.633)
O3': (-23.379,-4.861,48.704)
OP2: (-23.628,0.338,50.545)
C3': (-22.700,-3.860,47.982)
C1': (-21.480,-3.220,46.079)
C5': (-24.471,-2.040,47.638)
O6: (-16.670,-0.118,47.825)
O4': (-22.706,-2.521,46.062)
C8: (-20.745,-1.226,47.337)
C2: (-17.136,-3.043,45.833)
C6: (-17.241,-1.045,47.218)
C5: (-18.631,-1.302,47.138)
C4: (-19.105,-2.378,46.435)
P: (-24.558,-0.311,49.577)
C4': (-23.612,-3.107,47.030)
C2': (-21.648,-4.404,47.037)
O2': (-22.148,-5.515,46.312)
N1: (-16.540,-2.002,46.503)
N2: (-16.294,-3.856,45.207)
N3: (-18.427,-3.305,45.758)
N7: (-19.678,-0.594,47.692)
N9: (-20.457,-2.301,46.567)
O5': (-23.776,-1.317,48.633)
O3': (-23.379,-4.861,48.704)
Image (generated by PyMOL):