ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1K9M:A423:A178

Extra

PDB:
ATOM 1 O3' U A 422 66.968 115.539 16.535 1.00 40.89 O
ATOM 2 P A A 423 65.960 115.217 17.742 1.00 40.82 P
ATOM 3 OP1 A A 423 66.212 116.278 18.711 1.00 42.18 O
ATOM 4 OP2 A A 423 66.046 113.801 18.172 1.00 39.78 O
ATOM 5 O5' A A 423 64.522 115.456 17.099 1.00 42.76 O
ATOM 6 C5' A A 423 64.208 116.679 16.398 1.00 43.69 C
ATOM 7 C4' A A 423 62.918 116.520 15.624 1.00 46.38 C
ATOM 8 O4' A A 423 63.059 115.486 14.615 1.00 46.53 O
ATOM 9 C3' A A 423 61.748 116.087 16.485 1.00 47.96 C
ATOM 10 O3' A A 423 61.074 117.206 17.034 1.00 50.01 O
ATOM 11 C2' A A 423 60.879 115.268 15.540 1.00 47.75 C
ATOM 12 O2' A A 423 59.971 116.027 14.763 1.00 49.76 O
ATOM 13 C1' A A 423 61.938 114.628 14.645 1.00 46.34 C
ATOM 14 N9 A A 423 62.403 113.320 15.092 1.00 46.28 N
ATOM 15 C8 A A 423 63.605 112.992 15.681 1.00 45.52 C
ATOM 16 N7 A A 423 63.764 111.704 15.885 1.00 45.11 N
ATOM 17 C5 A A 423 62.584 111.149 15.417 1.00 46.16 C
ATOM 18 C6 A A 423 62.135 109.820 15.324 1.00 46.83 C
ATOM 19 N6 A A 423 62.862 108.766 15.699 1.00 46.41 N
ATOM 20 N1 A A 423 60.899 109.610 14.817 1.00 47.51 N
ATOM 21 C2 A A 423 60.176 110.668 14.421 1.00 48.52 C
ATOM 22 N3 A A 423 60.492 111.958 14.440 1.00 47.78 N
ATOM 23 C4 A A 423 61.724 112.137 14.953 1.00 46.60 C
ATOM 24 P A A 424 60.277 117.043 18.413 1.00 50.94 P
ATOM 25 OP1 A A 424 59.399 118.227 18.623 1.00 50.85 O
ATOM 26 OP2 A A 424 61.256 116.651 19.461 1.00 51.57 O
ATOM 27 O5' A A 424 59.347 115.797 18.114 1.00 49.57 O
TER

ATOM 1 O3' A B 177 71.948 107.615 25.066 1.00 47.25 O
ATOM 2 P G B 178 73.069 107.326 23.946 1.00 48.02 P
ATOM 3 OP1 G B 178 73.790 106.075 24.366 1.00 45.74 O
ATOM 4 OP2 G B 178 73.848 108.569 23.689 1.00 46.23 O
ATOM 5 O5' G B 178 72.199 106.964 22.660 1.00 46.14 O
ATOM 6 C5' G B 178 71.425 105.752 22.630 1.00 45.38 C
ATOM 7 C4' G B 178 70.496 105.748 21.440 1.00 46.05 C
ATOM 8 O4' G B 178 69.478 106.767 21.572 1.00 45.81 O
ATOM 9 C3' G B 178 71.151 106.005 20.100 1.00 47.47 C
ATOM 10 O3' G B 178 71.706 104.766 19.647 1.00 50.73 O
ATOM 11 C2' G B 178 69.979 106.499 19.256 1.00 46.87 C
ATOM 12 O2' G B 178 69.183 105.435 18.770 1.00 47.04 O
ATOM 13 C1' G B 178 69.148 107.277 20.293 1.00 45.71 C
ATOM 14 N9 G B 178 69.353 108.727 20.318 1.00 45.40 N
ATOM 15 C8 G B 178 70.416 109.390 20.880 1.00 44.89 C
ATOM 16 N7 G B 178 70.350 110.683 20.738 1.00 45.20 N
ATOM 17 C5 G B 178 69.172 110.896 20.048 1.00 46.16 C
ATOM 18 C6 G B 178 68.592 112.104 19.587 1.00 48.18 C
ATOM 19 O6 G B 178 69.013 113.260 19.714 1.00 50.19 O
ATOM 20 N1 G B 178 67.403 111.875 18.902 1.00 48.05 N
ATOM 21 C2 G B 178 66.840 110.643 18.682 1.00 46.50 C
ATOM 22 N2 G B 178 65.696 110.637 17.976 1.00 44.71 N
ATOM 23 N3 G B 178 67.371 109.498 19.118 1.00 45.47 N
ATOM 24 C4 G B 178 68.535 109.700 19.782 1.00 45.41 C
ATOM 25 P A B 179 73.148 104.737 18.937 1.00 53.48 P
ATOM 26 OP1 A B 179 73.668 103.343 19.047 1.00 51.47 O
ATOM 27 OP2 A B 179 73.960 105.862 19.494 1.00 54.85 O
ATOM 28 O5' A B 179 72.763 105.086 17.425 1.00 53.85 O
TER

Atoms:
OP1: (66.212,116.278,18.711)
OP2: (66.046,113.801,18.172)
C3': (61.748,116.087,16.485)
C1': (61.938,114.628,14.645)
C5': (64.208,116.679,16.398)
O4': (63.059,115.486,14.615)
C8: (63.605,112.992,15.681)
O2': (59.971,116.027,14.763)
C6: (62.135,109.820,15.324)
C5: (62.584,111.149,15.417)
C4: (61.724,112.137,14.953)
P: (65.960,115.217,17.742)
C4': (62.918,116.520,15.624)
C2': (60.879,115.268,15.540)
C2: (60.176,110.668,14.421)
N1: (60.899,109.610,14.817)
N3: (60.492,111.958,14.440)
N6: (62.862,108.766,15.699)
N7: (63.764,111.704,15.885)
N9: (62.403,113.320,15.092)
O5': (64.522,115.456,17.099)
O3': (61.074,117.206,17.034)
OP1: (73.790,106.075,24.366)
OP2: (73.848,108.569,23.689)
C3': (71.151,106.005,20.100)
C1': (69.148,107.277,20.293)
C5': (71.425,105.752,22.630)
O6: (69.013,113.260,19.714)
O4': (69.478,106.767,21.572)
C8: (70.416,109.390,20.880)
C2: (66.840,110.643,18.682)
C6: (68.592,112.104,19.587)
C5: (69.172,110.896,20.048)
C4: (68.535,109.700,19.782)
P: (73.069,107.326,23.946)
C4': (70.496,105.748,21.440)
C2': (69.979,106.499,19.256)
O2': (69.183,105.435,18.770)
N1: (67.403,111.875,18.902)
N2: (65.696,110.637,17.976)
N3: (67.371,109.498,19.118)
N7: (70.350,110.683,20.738)
N9: (69.353,108.727,20.318)
O5': (72.199,106.964,22.660)
O3': (71.706,104.766,19.647)
Image (generated by PyMOL):
PyMOL image
show in jmol