Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQO:013:0506
Extra
PDB:
ATOM 1 O3' U A 12 34.224 148.018 73.934 1.00 36.72 O
ATOM 2 P G A 13 34.651 147.639 72.428 1.00 35.69 P
ATOM 3 OP1 G A 13 36.038 148.090 72.224 1.00 38.32 O
ATOM 4 OP2 G A 13 33.588 148.096 71.495 1.00 39.41 O
ATOM 5 O5' G A 13 34.665 146.049 72.394 1.00 37.60 O
ATOM 6 C5' G A 13 35.614 145.288 73.153 1.00 34.99 C
ATOM 7 C4' G A 13 35.244 143.829 73.103 1.00 37.62 C
ATOM 8 O4' G A 13 33.960 143.628 73.759 1.00 39.53 O
ATOM 9 C3' G A 13 35.039 143.287 71.702 1.00 36.17 C
ATOM 10 O3' G A 13 36.284 142.892 71.140 1.00 36.19 O
ATOM 11 C2' G A 13 34.098 142.115 71.939 1.00 36.75 C
ATOM 12 O2' G A 13 34.793 141.002 72.457 1.00 34.33 O
ATOM 13 C1' G A 13 33.198 142.674 73.044 1.00 37.59 C
ATOM 14 N9 G A 13 31.984 143.341 72.582 1.00 39.56 N
ATOM 15 C8 G A 13 31.889 144.614 72.065 1.00 37.47 C
ATOM 16 N7 G A 13 30.666 144.962 71.783 1.00 36.15 N
ATOM 17 C5 G A 13 29.902 143.852 72.121 1.00 37.58 C
ATOM 18 C6 G A 13 28.500 143.645 72.040 1.00 36.01 C
ATOM 19 O6 G A 13 27.631 144.436 71.664 1.00 32.24 O
ATOM 20 N1 G A 13 28.144 142.368 72.465 1.00 35.48 N
ATOM 21 C2 G A 13 29.025 141.414 72.923 1.00 37.35 C
ATOM 22 N2 G A 13 28.493 140.228 73.269 1.00 35.08 N
ATOM 23 N3 G A 13 30.334 141.604 73.027 1.00 36.91 N
ATOM 24 C4 G A 13 30.700 142.836 72.605 1.00 38.02 C
ATOM 25 P G A 14 36.574 143.138 69.578 1.00 33.98 P
ATOM 26 OP1 G A 14 38.036 143.059 69.378 1.00 37.08 O
ATOM 27 OP2 G A 14 35.839 144.361 69.172 1.00 36.78 O
ATOM 28 O5' G A 14 35.901 141.897 68.848 1.00 33.65 O
TER
ATOM 1 O3' U B 505 20.855 141.080 64.996 1.00 40.00 O
ATOM 2 P G B 506 20.534 141.847 66.372 1.00 38.99 P
ATOM 3 OP1 G B 506 19.329 141.193 66.941 1.00 38.51 O
ATOM 4 OP2 G B 506 20.531 143.305 66.143 1.00 42.18 O
ATOM 5 O5' G B 506 21.784 141.505 67.294 1.00 42.30 O
ATOM 6 C5' G B 506 22.188 140.141 67.495 1.00 38.82 C
ATOM 7 C4' G B 506 23.594 140.087 68.024 1.00 37.92 C
ATOM 8 O4' G B 506 24.500 140.636 67.018 1.00 37.94 O
ATOM 9 C3' G B 506 23.854 140.892 69.303 1.00 37.59 C
ATOM 10 O3' G B 506 24.750 140.143 70.117 1.00 37.77 O
ATOM 11 C2' G B 506 24.595 142.111 68.764 1.00 38.66 C
ATOM 12 O2' G B 506 25.435 142.765 69.690 1.00 36.29 O
ATOM 13 C1' G B 506 25.432 141.454 67.674 1.00 37.07 C
ATOM 14 N9 G B 506 26.052 142.398 66.750 1.00 37.96 N
ATOM 15 C8 G B 506 25.546 143.606 66.327 1.00 34.36 C
ATOM 16 N7 G B 506 26.420 144.324 65.679 1.00 37.15 N
ATOM 17 C5 G B 506 27.557 143.528 65.632 1.00 36.42 C
ATOM 18 C6 G B 506 28.855 143.801 65.113 1.00 37.42 C
ATOM 19 O6 G B 506 29.275 144.841 64.593 1.00 37.56 O
ATOM 20 N1 G B 506 29.708 142.710 65.266 1.00 35.49 N
ATOM 21 C2 G B 506 29.360 141.514 65.843 1.00 35.31 C
ATOM 22 N2 G B 506 30.307 140.573 65.866 1.00 36.32 N
ATOM 23 N3 G B 506 28.166 141.259 66.357 1.00 37.50 N
ATOM 24 C4 G B 506 27.323 142.307 66.226 1.00 36.97 C
ATOM 25 P A B 507 24.622 140.185 71.725 1.00 36.93 P
ATOM 26 OP1 A B 507 23.226 140.485 72.109 1.00 35.70 O
ATOM 27 OP2 A B 507 25.725 141.036 72.247 1.00 36.51 O
ATOM 28 O5' A B 507 24.940 138.677 72.127 1.00 35.93 O
TER
ATOM 2 P G A 13 34.651 147.639 72.428 1.00 35.69 P
ATOM 3 OP1 G A 13 36.038 148.090 72.224 1.00 38.32 O
ATOM 4 OP2 G A 13 33.588 148.096 71.495 1.00 39.41 O
ATOM 5 O5' G A 13 34.665 146.049 72.394 1.00 37.60 O
ATOM 6 C5' G A 13 35.614 145.288 73.153 1.00 34.99 C
ATOM 7 C4' G A 13 35.244 143.829 73.103 1.00 37.62 C
ATOM 8 O4' G A 13 33.960 143.628 73.759 1.00 39.53 O
ATOM 9 C3' G A 13 35.039 143.287 71.702 1.00 36.17 C
ATOM 10 O3' G A 13 36.284 142.892 71.140 1.00 36.19 O
ATOM 11 C2' G A 13 34.098 142.115 71.939 1.00 36.75 C
ATOM 12 O2' G A 13 34.793 141.002 72.457 1.00 34.33 O
ATOM 13 C1' G A 13 33.198 142.674 73.044 1.00 37.59 C
ATOM 14 N9 G A 13 31.984 143.341 72.582 1.00 39.56 N
ATOM 15 C8 G A 13 31.889 144.614 72.065 1.00 37.47 C
ATOM 16 N7 G A 13 30.666 144.962 71.783 1.00 36.15 N
ATOM 17 C5 G A 13 29.902 143.852 72.121 1.00 37.58 C
ATOM 18 C6 G A 13 28.500 143.645 72.040 1.00 36.01 C
ATOM 19 O6 G A 13 27.631 144.436 71.664 1.00 32.24 O
ATOM 20 N1 G A 13 28.144 142.368 72.465 1.00 35.48 N
ATOM 21 C2 G A 13 29.025 141.414 72.923 1.00 37.35 C
ATOM 22 N2 G A 13 28.493 140.228 73.269 1.00 35.08 N
ATOM 23 N3 G A 13 30.334 141.604 73.027 1.00 36.91 N
ATOM 24 C4 G A 13 30.700 142.836 72.605 1.00 38.02 C
ATOM 25 P G A 14 36.574 143.138 69.578 1.00 33.98 P
ATOM 26 OP1 G A 14 38.036 143.059 69.378 1.00 37.08 O
ATOM 27 OP2 G A 14 35.839 144.361 69.172 1.00 36.78 O
ATOM 28 O5' G A 14 35.901 141.897 68.848 1.00 33.65 O
TER
ATOM 1 O3' U B 505 20.855 141.080 64.996 1.00 40.00 O
ATOM 2 P G B 506 20.534 141.847 66.372 1.00 38.99 P
ATOM 3 OP1 G B 506 19.329 141.193 66.941 1.00 38.51 O
ATOM 4 OP2 G B 506 20.531 143.305 66.143 1.00 42.18 O
ATOM 5 O5' G B 506 21.784 141.505 67.294 1.00 42.30 O
ATOM 6 C5' G B 506 22.188 140.141 67.495 1.00 38.82 C
ATOM 7 C4' G B 506 23.594 140.087 68.024 1.00 37.92 C
ATOM 8 O4' G B 506 24.500 140.636 67.018 1.00 37.94 O
ATOM 9 C3' G B 506 23.854 140.892 69.303 1.00 37.59 C
ATOM 10 O3' G B 506 24.750 140.143 70.117 1.00 37.77 O
ATOM 11 C2' G B 506 24.595 142.111 68.764 1.00 38.66 C
ATOM 12 O2' G B 506 25.435 142.765 69.690 1.00 36.29 O
ATOM 13 C1' G B 506 25.432 141.454 67.674 1.00 37.07 C
ATOM 14 N9 G B 506 26.052 142.398 66.750 1.00 37.96 N
ATOM 15 C8 G B 506 25.546 143.606 66.327 1.00 34.36 C
ATOM 16 N7 G B 506 26.420 144.324 65.679 1.00 37.15 N
ATOM 17 C5 G B 506 27.557 143.528 65.632 1.00 36.42 C
ATOM 18 C6 G B 506 28.855 143.801 65.113 1.00 37.42 C
ATOM 19 O6 G B 506 29.275 144.841 64.593 1.00 37.56 O
ATOM 20 N1 G B 506 29.708 142.710 65.266 1.00 35.49 N
ATOM 21 C2 G B 506 29.360 141.514 65.843 1.00 35.31 C
ATOM 22 N2 G B 506 30.307 140.573 65.866 1.00 36.32 N
ATOM 23 N3 G B 506 28.166 141.259 66.357 1.00 37.50 N
ATOM 24 C4 G B 506 27.323 142.307 66.226 1.00 36.97 C
ATOM 25 P A B 507 24.622 140.185 71.725 1.00 36.93 P
ATOM 26 OP1 A B 507 23.226 140.485 72.109 1.00 35.70 O
ATOM 27 OP2 A B 507 25.725 141.036 72.247 1.00 36.51 O
ATOM 28 O5' A B 507 24.940 138.677 72.127 1.00 35.93 O
TER
Atoms:
OP1: (36.038,148.090,72.224)
OP2: (33.588,148.096,71.495)
C3': (35.039,143.287,71.702)
C1': (33.198,142.674,73.044)
C5': (35.614,145.288,73.153)
O6: (27.631,144.436,71.664)
O4': (33.960,143.628,73.759)
C8: (31.889,144.614,72.065)
C2: (29.025,141.414,72.923)
C6: (28.500,143.645,72.040)
C5: (29.902,143.852,72.121)
C4: (30.700,142.836,72.605)
P: (34.651,147.639,72.428)
C4': (35.244,143.829,73.103)
C2': (34.098,142.115,71.939)
O2': (34.793,141.002,72.457)
N1: (28.144,142.368,72.465)
N2: (28.493,140.228,73.269)
N3: (30.334,141.604,73.027)
N7: (30.666,144.962,71.783)
N9: (31.984,143.341,72.582)
O5': (34.665,146.049,72.394)
O3': (36.284,142.892,71.140)
OP2: (33.588,148.096,71.495)
C3': (35.039,143.287,71.702)
C1': (33.198,142.674,73.044)
C5': (35.614,145.288,73.153)
O6: (27.631,144.436,71.664)
O4': (33.960,143.628,73.759)
C8: (31.889,144.614,72.065)
C2: (29.025,141.414,72.923)
C6: (28.500,143.645,72.040)
C5: (29.902,143.852,72.121)
C4: (30.700,142.836,72.605)
P: (34.651,147.639,72.428)
C4': (35.244,143.829,73.103)
C2': (34.098,142.115,71.939)
O2': (34.793,141.002,72.457)
N1: (28.144,142.368,72.465)
N2: (28.493,140.228,73.269)
N3: (30.334,141.604,73.027)
N7: (30.666,144.962,71.783)
N9: (31.984,143.341,72.582)
O5': (34.665,146.049,72.394)
O3': (36.284,142.892,71.140)
OP1: (19.329,141.193,66.941)
OP2: (20.531,143.305,66.143)
C3': (23.854,140.892,69.303)
C1': (25.432,141.454,67.674)
C5': (22.188,140.141,67.495)
O6: (29.275,144.841,64.593)
O4': (24.500,140.636,67.018)
C8: (25.546,143.606,66.327)
C2: (29.360,141.514,65.843)
C6: (28.855,143.801,65.113)
C5: (27.557,143.528,65.632)
C4: (27.323,142.307,66.226)
P: (20.534,141.847,66.372)
C4': (23.594,140.087,68.024)
C2': (24.595,142.111,68.764)
O2': (25.435,142.765,69.690)
N1: (29.708,142.710,65.266)
N2: (30.307,140.573,65.866)
N3: (28.166,141.259,66.357)
N7: (26.420,144.324,65.679)
N9: (26.052,142.398,66.750)
O5': (21.784,141.505,67.294)
O3': (24.750,140.143,70.117)
OP2: (20.531,143.305,66.143)
C3': (23.854,140.892,69.303)
C1': (25.432,141.454,67.674)
C5': (22.188,140.141,67.495)
O6: (29.275,144.841,64.593)
O4': (24.500,140.636,67.018)
C8: (25.546,143.606,66.327)
C2: (29.360,141.514,65.843)
C6: (28.855,143.801,65.113)
C5: (27.557,143.528,65.632)
C4: (27.323,142.307,66.226)
P: (20.534,141.847,66.372)
C4': (23.594,140.087,68.024)
C2': (24.595,142.111,68.764)
O2': (25.435,142.765,69.690)
N1: (29.708,142.710,65.266)
N2: (30.307,140.573,65.866)
N3: (28.166,141.259,66.357)
N7: (26.420,144.324,65.679)
N9: (26.052,142.398,66.750)
O5': (21.784,141.505,67.294)
O3': (24.750,140.143,70.117)
Image (generated by PyMOL):