Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:013:0506
Extra
PDB:
ATOM 1 O3' U A 12 34.311 148.324 73.877 1.00 39.61 O
ATOM 2 P G A 13 34.793 147.929 72.397 1.00 39.91 P
ATOM 3 OP1 G A 13 36.177 148.441 72.238 1.00 38.77 O
ATOM 4 OP2 G A 13 33.736 148.361 71.451 1.00 42.48 O
ATOM 5 O5' G A 13 34.833 146.336 72.389 1.00 39.77 O
ATOM 6 C5' G A 13 35.782 145.591 73.181 1.00 37.14 C
ATOM 7 C4' G A 13 35.461 144.117 73.105 1.00 38.30 C
ATOM 8 O4' G A 13 34.176 143.865 73.739 1.00 40.17 O
ATOM 9 C3' G A 13 35.307 143.586 71.688 1.00 37.36 C
ATOM 10 O3' G A 13 36.575 143.201 71.177 1.00 36.47 O
ATOM 11 C2' G A 13 34.362 142.409 71.871 1.00 37.48 C
ATOM 12 O2' G A 13 35.044 141.287 72.374 1.00 39.41 O
ATOM 13 C1' G A 13 33.432 142.931 72.970 1.00 38.89 C
ATOM 14 N9 G A 13 32.230 143.613 72.493 1.00 40.24 N
ATOM 15 C8 G A 13 32.151 144.899 72.018 1.00 38.16 C
ATOM 16 N7 G A 13 30.938 145.256 71.706 1.00 39.14 N
ATOM 17 C5 G A 13 30.167 144.135 71.978 1.00 39.23 C
ATOM 18 C6 G A 13 28.773 143.927 71.837 1.00 39.59 C
ATOM 19 O6 G A 13 27.916 144.720 71.441 1.00 41.54 O
ATOM 20 N1 G A 13 28.404 142.644 72.220 1.00 39.11 N
ATOM 21 C2 G A 13 29.261 141.687 72.688 1.00 39.99 C
ATOM 22 N2 G A 13 28.710 140.512 73.012 1.00 38.68 N
ATOM 23 N3 G A 13 30.567 141.868 72.829 1.00 41.98 N
ATOM 24 C4 G A 13 30.948 143.108 72.456 1.00 40.33 C
ATOM 25 P G A 14 36.910 143.410 69.621 1.00 35.97 P
ATOM 26 OP1 G A 14 38.370 143.260 69.424 1.00 36.65 O
ATOM 27 OP2 G A 14 36.243 144.665 69.200 1.00 37.21 O
ATOM 28 O5' G A 14 36.196 142.184 68.899 1.00 34.91 O
TER
ATOM 1 O3' U B 505 21.081 141.289 64.776 1.00 34.03 O
ATOM 2 P G B 506 20.821 142.026 66.178 1.00 39.33 P
ATOM 3 OP1 G B 506 19.649 141.348 66.798 1.00 36.60 O
ATOM 4 OP2 G B 506 20.800 143.500 65.981 1.00 37.86 O
ATOM 5 O5' G B 506 22.115 141.701 67.047 1.00 40.34 O
ATOM 6 C5' G B 506 22.624 140.363 67.141 1.00 40.46 C
ATOM 7 C4' G B 506 24.032 140.381 67.680 1.00 40.54 C
ATOM 8 O4' G B 506 24.931 140.982 66.694 1.00 41.99 O
ATOM 9 C3' G B 506 24.217 141.193 68.964 1.00 39.49 C
ATOM 10 O3' G B 506 25.104 140.500 69.833 1.00 39.25 O
ATOM 11 C2' G B 506 24.897 142.459 68.457 1.00 39.06 C
ATOM 12 O2' G B 506 25.680 143.138 69.415 1.00 38.90 O
ATOM 13 C1' G B 506 25.784 141.871 67.369 1.00 40.12 C
ATOM 14 N9 G B 506 26.364 142.844 66.451 1.00 39.18 N
ATOM 15 C8 G B 506 25.809 144.023 66.014 1.00 40.22 C
ATOM 16 N7 G B 506 26.651 144.769 65.351 1.00 39.88 N
ATOM 17 C5 G B 506 27.816 144.016 65.312 1.00 41.66 C
ATOM 18 C6 G B 506 29.090 144.316 64.758 1.00 42.25 C
ATOM 19 O6 G B 506 29.454 145.345 64.187 1.00 44.81 O
ATOM 20 N1 G B 506 29.987 143.267 64.935 1.00 41.92 N
ATOM 21 C2 G B 506 29.699 142.084 65.566 1.00 42.45 C
ATOM 22 N2 G B 506 30.693 141.189 65.627 1.00 41.92 N
ATOM 23 N3 G B 506 28.522 141.796 66.097 1.00 42.70 N
ATOM 24 C4 G B 506 27.636 142.803 65.940 1.00 40.89 C
ATOM 25 P A B 507 24.858 140.538 71.419 1.00 39.55 P
ATOM 26 OP1 A B 507 23.428 140.839 71.678 1.00 39.15 O
ATOM 27 OP2 A B 507 25.902 141.409 72.018 1.00 38.90 O
ATOM 28 O5' A B 507 25.142 139.037 71.864 1.00 39.30 O
TER
ATOM 2 P G A 13 34.793 147.929 72.397 1.00 39.91 P
ATOM 3 OP1 G A 13 36.177 148.441 72.238 1.00 38.77 O
ATOM 4 OP2 G A 13 33.736 148.361 71.451 1.00 42.48 O
ATOM 5 O5' G A 13 34.833 146.336 72.389 1.00 39.77 O
ATOM 6 C5' G A 13 35.782 145.591 73.181 1.00 37.14 C
ATOM 7 C4' G A 13 35.461 144.117 73.105 1.00 38.30 C
ATOM 8 O4' G A 13 34.176 143.865 73.739 1.00 40.17 O
ATOM 9 C3' G A 13 35.307 143.586 71.688 1.00 37.36 C
ATOM 10 O3' G A 13 36.575 143.201 71.177 1.00 36.47 O
ATOM 11 C2' G A 13 34.362 142.409 71.871 1.00 37.48 C
ATOM 12 O2' G A 13 35.044 141.287 72.374 1.00 39.41 O
ATOM 13 C1' G A 13 33.432 142.931 72.970 1.00 38.89 C
ATOM 14 N9 G A 13 32.230 143.613 72.493 1.00 40.24 N
ATOM 15 C8 G A 13 32.151 144.899 72.018 1.00 38.16 C
ATOM 16 N7 G A 13 30.938 145.256 71.706 1.00 39.14 N
ATOM 17 C5 G A 13 30.167 144.135 71.978 1.00 39.23 C
ATOM 18 C6 G A 13 28.773 143.927 71.837 1.00 39.59 C
ATOM 19 O6 G A 13 27.916 144.720 71.441 1.00 41.54 O
ATOM 20 N1 G A 13 28.404 142.644 72.220 1.00 39.11 N
ATOM 21 C2 G A 13 29.261 141.687 72.688 1.00 39.99 C
ATOM 22 N2 G A 13 28.710 140.512 73.012 1.00 38.68 N
ATOM 23 N3 G A 13 30.567 141.868 72.829 1.00 41.98 N
ATOM 24 C4 G A 13 30.948 143.108 72.456 1.00 40.33 C
ATOM 25 P G A 14 36.910 143.410 69.621 1.00 35.97 P
ATOM 26 OP1 G A 14 38.370 143.260 69.424 1.00 36.65 O
ATOM 27 OP2 G A 14 36.243 144.665 69.200 1.00 37.21 O
ATOM 28 O5' G A 14 36.196 142.184 68.899 1.00 34.91 O
TER
ATOM 1 O3' U B 505 21.081 141.289 64.776 1.00 34.03 O
ATOM 2 P G B 506 20.821 142.026 66.178 1.00 39.33 P
ATOM 3 OP1 G B 506 19.649 141.348 66.798 1.00 36.60 O
ATOM 4 OP2 G B 506 20.800 143.500 65.981 1.00 37.86 O
ATOM 5 O5' G B 506 22.115 141.701 67.047 1.00 40.34 O
ATOM 6 C5' G B 506 22.624 140.363 67.141 1.00 40.46 C
ATOM 7 C4' G B 506 24.032 140.381 67.680 1.00 40.54 C
ATOM 8 O4' G B 506 24.931 140.982 66.694 1.00 41.99 O
ATOM 9 C3' G B 506 24.217 141.193 68.964 1.00 39.49 C
ATOM 10 O3' G B 506 25.104 140.500 69.833 1.00 39.25 O
ATOM 11 C2' G B 506 24.897 142.459 68.457 1.00 39.06 C
ATOM 12 O2' G B 506 25.680 143.138 69.415 1.00 38.90 O
ATOM 13 C1' G B 506 25.784 141.871 67.369 1.00 40.12 C
ATOM 14 N9 G B 506 26.364 142.844 66.451 1.00 39.18 N
ATOM 15 C8 G B 506 25.809 144.023 66.014 1.00 40.22 C
ATOM 16 N7 G B 506 26.651 144.769 65.351 1.00 39.88 N
ATOM 17 C5 G B 506 27.816 144.016 65.312 1.00 41.66 C
ATOM 18 C6 G B 506 29.090 144.316 64.758 1.00 42.25 C
ATOM 19 O6 G B 506 29.454 145.345 64.187 1.00 44.81 O
ATOM 20 N1 G B 506 29.987 143.267 64.935 1.00 41.92 N
ATOM 21 C2 G B 506 29.699 142.084 65.566 1.00 42.45 C
ATOM 22 N2 G B 506 30.693 141.189 65.627 1.00 41.92 N
ATOM 23 N3 G B 506 28.522 141.796 66.097 1.00 42.70 N
ATOM 24 C4 G B 506 27.636 142.803 65.940 1.00 40.89 C
ATOM 25 P A B 507 24.858 140.538 71.419 1.00 39.55 P
ATOM 26 OP1 A B 507 23.428 140.839 71.678 1.00 39.15 O
ATOM 27 OP2 A B 507 25.902 141.409 72.018 1.00 38.90 O
ATOM 28 O5' A B 507 25.142 139.037 71.864 1.00 39.30 O
TER
Atoms:
OP1: (36.177,148.441,72.238)
OP2: (33.736,148.361,71.451)
C3': (35.307,143.586,71.688)
C1': (33.432,142.931,72.970)
C5': (35.782,145.591,73.181)
O6: (27.916,144.720,71.441)
O4': (34.176,143.865,73.739)
C8: (32.151,144.899,72.018)
C2: (29.261,141.687,72.688)
C6: (28.773,143.927,71.837)
C5: (30.167,144.135,71.978)
C4: (30.948,143.108,72.456)
P: (34.793,147.929,72.397)
C4': (35.461,144.117,73.105)
C2': (34.362,142.409,71.871)
O2': (35.044,141.287,72.374)
N1: (28.404,142.644,72.220)
N2: (28.710,140.512,73.012)
N3: (30.567,141.868,72.829)
N7: (30.938,145.256,71.706)
N9: (32.230,143.613,72.493)
O5': (34.833,146.336,72.389)
O3': (36.575,143.201,71.177)
OP2: (33.736,148.361,71.451)
C3': (35.307,143.586,71.688)
C1': (33.432,142.931,72.970)
C5': (35.782,145.591,73.181)
O6: (27.916,144.720,71.441)
O4': (34.176,143.865,73.739)
C8: (32.151,144.899,72.018)
C2: (29.261,141.687,72.688)
C6: (28.773,143.927,71.837)
C5: (30.167,144.135,71.978)
C4: (30.948,143.108,72.456)
P: (34.793,147.929,72.397)
C4': (35.461,144.117,73.105)
C2': (34.362,142.409,71.871)
O2': (35.044,141.287,72.374)
N1: (28.404,142.644,72.220)
N2: (28.710,140.512,73.012)
N3: (30.567,141.868,72.829)
N7: (30.938,145.256,71.706)
N9: (32.230,143.613,72.493)
O5': (34.833,146.336,72.389)
O3': (36.575,143.201,71.177)
OP1: (19.649,141.348,66.798)
OP2: (20.800,143.500,65.981)
C3': (24.217,141.193,68.964)
C1': (25.784,141.871,67.369)
C5': (22.624,140.363,67.141)
O6: (29.454,145.345,64.187)
O4': (24.931,140.982,66.694)
C8: (25.809,144.023,66.014)
C2: (29.699,142.084,65.566)
C6: (29.090,144.316,64.758)
C5: (27.816,144.016,65.312)
C4: (27.636,142.803,65.940)
P: (20.821,142.026,66.178)
C4': (24.032,140.381,67.680)
C2': (24.897,142.459,68.457)
O2': (25.680,143.138,69.415)
N1: (29.987,143.267,64.935)
N2: (30.693,141.189,65.627)
N3: (28.522,141.796,66.097)
N7: (26.651,144.769,65.351)
N9: (26.364,142.844,66.451)
O5': (22.115,141.701,67.047)
O3': (25.104,140.500,69.833)
OP2: (20.800,143.500,65.981)
C3': (24.217,141.193,68.964)
C1': (25.784,141.871,67.369)
C5': (22.624,140.363,67.141)
O6: (29.454,145.345,64.187)
O4': (24.931,140.982,66.694)
C8: (25.809,144.023,66.014)
C2: (29.699,142.084,65.566)
C6: (29.090,144.316,64.758)
C5: (27.816,144.016,65.312)
C4: (27.636,142.803,65.940)
P: (20.821,142.026,66.178)
C4': (24.032,140.381,67.680)
C2': (24.897,142.459,68.457)
O2': (25.680,143.138,69.415)
N1: (29.987,143.267,64.935)
N2: (30.693,141.189,65.627)
N3: (28.522,141.796,66.097)
N7: (26.651,144.769,65.351)
N9: (26.364,142.844,66.451)
O5': (22.115,141.701,67.047)
O3': (25.104,140.500,69.833)
Image (generated by PyMOL):