ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:02474:02471

Extra

PDB:
ATOM 1 O3' G A2473 95.979 114.084 82.253 1.00 32.56 O
ATOM 2 P A A2474 95.309 115.092 83.304 1.00 34.78 P
ATOM 3 OP1 A A2474 95.939 116.424 83.138 1.00 36.85 O
ATOM 4 OP2 A A2474 95.327 114.445 84.634 1.00 36.68 O
ATOM 5 O5' A A2474 93.791 115.213 82.835 1.00 35.96 O
ATOM 6 C5' A A2474 93.426 115.945 81.647 1.00 34.42 C
ATOM 7 C4' A A2474 92.018 115.586 81.227 1.00 34.22 C
ATOM 8 O4' A A2474 91.952 114.153 81.022 1.00 35.20 O
ATOM 9 C3' A A2474 90.915 115.876 82.237 1.00 32.90 C
ATOM 10 O3' A A2474 90.395 117.178 82.031 1.00 31.99 O
ATOM 11 C2' A A2474 89.839 114.877 81.841 1.00 31.63 C
ATOM 12 O2' A A2474 89.089 115.320 80.729 1.00 32.43 O
ATOM 13 C1' A A2474 90.678 113.678 81.406 1.00 33.14 C
ATOM 14 N9 A A2474 90.851 112.664 82.441 1.00 33.09 N
ATOM 15 C8 A A2474 91.600 112.724 83.587 1.00 32.91 C
ATOM 16 N7 A A2474 91.537 111.635 84.314 1.00 33.09 N
ATOM 17 C5 A A2474 90.693 110.803 83.596 1.00 32.83 C
ATOM 18 C6 A A2474 90.216 109.505 83.832 1.00 32.83 C
ATOM 19 N6 A A2474 90.538 108.777 84.900 1.00 32.94 N
ATOM 20 N1 A A2474 89.382 108.970 82.918 1.00 32.63 N
ATOM 21 C2 A A2474 89.054 109.695 81.846 1.00 31.08 C
ATOM 22 N3 A A2474 89.436 110.918 81.513 1.00 31.74 N
ATOM 23 C4 A A2474 90.264 111.424 82.440 1.00 32.67 C
ATOM 24 P G A2475 90.405 118.252 83.211 1.00 33.04 P
ATOM 25 OP1 G A2475 89.465 119.323 82.802 1.00 31.78 O
ATOM 26 OP2 G A2475 91.818 118.583 83.483 1.00 37.72 O
ATOM 27 O5' G A2475 89.877 117.509 84.520 1.00 35.26 O
TER

ATOM 1 O3' C B2470 97.208 105.405 93.127 1.00 38.74 O
ATOM 2 P G B2471 98.191 105.172 91.877 1.00 41.36 P
ATOM 3 OP1 G B2471 98.336 103.709 91.690 1.00 41.60 O
ATOM 4 OP2 G B2471 99.398 106.017 92.021 1.00 40.29 O
ATOM 5 O5' G B2471 97.366 105.730 90.636 1.00 42.38 O
ATOM 6 C5' G B2471 96.204 105.038 90.165 1.00 40.34 C
ATOM 7 C4' G B2471 95.587 105.768 89.001 1.00 40.33 C
ATOM 8 O4' G B2471 95.086 107.058 89.429 1.00 41.62 O
ATOM 9 C3' G B2471 96.502 106.133 87.851 1.00 40.49 C
ATOM 10 O3' G B2471 96.769 105.024 87.015 1.00 40.98 O
ATOM 11 C2' G B2471 95.664 107.180 87.131 1.00 41.46 C
ATOM 12 O2' G B2471 94.640 106.610 86.344 1.00 42.30 O
ATOM 13 C1' G B2471 95.047 107.935 88.314 1.00 42.28 C
ATOM 14 N9 G B2471 95.836 109.126 88.609 1.00 44.14 N
ATOM 15 C8 G B2471 96.875 109.255 89.499 1.00 43.20 C
ATOM 16 N7 G B2471 97.470 110.414 89.423 1.00 44.26 N
ATOM 17 C5 G B2471 96.762 111.097 88.443 1.00 46.17 C
ATOM 18 C6 G B2471 96.964 112.384 87.892 1.00 47.24 C
ATOM 19 O6 G B2471 97.861 113.191 88.135 1.00 49.83 O
ATOM 20 N1 G B2471 95.993 112.694 86.946 1.00 46.60 N
ATOM 21 C2 G B2471 94.973 111.869 86.564 1.00 45.95 C
ATOM 22 N2 G B2471 94.120 112.364 85.667 1.00 46.18 N
ATOM 23 N3 G B2471 94.797 110.650 87.037 1.00 46.12 N
ATOM 24 C4 G B2471 95.722 110.333 87.968 1.00 45.68 C
ATOM 25 P U B2472 98.251 104.797 86.447 1.00 42.83 P
ATOM 26 OP1 U B2472 98.175 103.725 85.422 1.00 44.94 O
ATOM 27 OP2 U B2472 99.170 104.644 87.602 1.00 42.76 O
ATOM 28 O5' U B2472 98.589 106.146 85.671 1.00 41.36 O
TER

Atoms:
OP1: (95.939,116.424,83.138)
OP2: (95.327,114.445,84.634)
C3': (90.915,115.876,82.237)
C1': (90.678,113.678,81.406)
C5': (93.426,115.945,81.647)
O4': (91.952,114.153,81.022)
C8: (91.600,112.724,83.587)
O2': (89.089,115.320,80.729)
C6: (90.216,109.505,83.832)
C5: (90.693,110.803,83.596)
C4: (90.264,111.424,82.440)
P: (95.309,115.092,83.304)
C4': (92.018,115.586,81.227)
C2': (89.839,114.877,81.841)
C2: (89.054,109.695,81.846)
N1: (89.382,108.970,82.918)
N3: (89.436,110.918,81.513)
N6: (90.538,108.777,84.900)
N7: (91.537,111.635,84.314)
N9: (90.851,112.664,82.441)
O5': (93.791,115.213,82.835)
O3': (90.395,117.178,82.031)
OP1: (98.336,103.709,91.690)
OP2: (99.398,106.017,92.021)
C3': (96.502,106.133,87.851)
C1': (95.047,107.935,88.314)
C5': (96.204,105.038,90.165)
O6: (97.861,113.191,88.135)
O4': (95.086,107.058,89.429)
C8: (96.875,109.255,89.499)
C2: (94.973,111.869,86.564)
C6: (96.964,112.384,87.892)
C5: (96.762,111.097,88.443)
C4: (95.722,110.333,87.968)
P: (98.191,105.172,91.877)
C4': (95.587,105.768,89.001)
C2': (95.664,107.180,87.131)
O2': (94.640,106.610,86.344)
N1: (95.993,112.694,86.946)
N2: (94.120,112.364,85.667)
N3: (94.797,110.650,87.037)
N7: (97.470,110.414,89.423)
N9: (95.836,109.126,88.609)
O5': (97.366,105.730,90.636)
O3': (96.769,105.024,87.015)
Image (generated by PyMOL):
PyMOL image
show in jmol