Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01275:01298
Extra
PDB:
ATOM 1 O3' G A1274 3.946 136.719 57.109 1.00 45.69 O
ATOM 2 P G A1275 4.886 136.828 58.405 1.00 44.00 P
ATOM 3 OP1 G A1275 4.648 135.593 59.194 1.00 43.14 O
ATOM 4 OP2 G A1275 4.688 138.150 59.039 1.00 42.81 O
ATOM 5 O5' G A1275 6.363 136.800 57.826 1.00 43.26 O
ATOM 6 C5' G A1275 6.898 135.631 57.180 1.00 43.13 C
ATOM 7 C4' G A1275 8.406 135.711 57.182 1.00 43.33 C
ATOM 8 O4' G A1275 8.809 136.964 56.545 1.00 43.97 O
ATOM 9 C3' G A1275 9.016 135.756 58.581 1.00 41.77 C
ATOM 10 O3' G A1275 10.334 135.234 58.506 1.00 40.34 O
ATOM 11 C2' G A1275 9.076 137.249 58.859 1.00 41.80 C
ATOM 12 O2' G A1275 10.002 137.611 59.858 1.00 42.86 O
ATOM 13 C1' G A1275 9.493 137.770 57.485 1.00 42.39 C
ATOM 14 N9 G A1275 9.162 139.170 57.249 1.00 40.68 N
ATOM 15 C8 G A1275 7.995 139.820 57.573 1.00 40.67 C
ATOM 16 N7 G A1275 8.027 141.096 57.297 1.00 40.96 N
ATOM 17 C5 G A1275 9.284 141.296 56.741 1.00 41.47 C
ATOM 18 C6 G A1275 9.899 142.480 56.268 1.00 41.56 C
ATOM 19 O6 G A1275 9.447 143.631 56.258 1.00 41.91 O
ATOM 20 N1 G A1275 11.179 142.232 55.782 1.00 42.08 N
ATOM 21 C2 G A1275 11.794 141.004 55.763 1.00 41.45 C
ATOM 22 N2 G A1275 13.030 140.971 55.249 1.00 40.86 N
ATOM 23 N3 G A1275 11.237 139.894 56.213 1.00 40.02 N
ATOM 24 C4 G A1275 9.990 140.112 56.687 1.00 41.37 C
ATOM 25 P A A1276 10.916 134.342 59.703 1.00 39.73 P
ATOM 26 OP1 A A1276 9.853 133.413 60.181 1.00 38.69 O
ATOM 27 OP2 A A1276 11.576 135.253 60.677 1.00 37.90 O
ATOM 28 O5' A A1276 12.010 133.465 58.953 1.00 35.08 O
TER
ATOM 1 O3' U B1297 15.578 144.543 66.330 1.00 41.61 O
ATOM 2 P G B1298 15.478 144.988 64.794 1.00 42.69 P
ATOM 3 OP1 G B1298 16.282 146.237 64.681 1.00 44.23 O
ATOM 4 OP2 G B1298 14.051 144.994 64.401 1.00 43.10 O
ATOM 5 O5' G B1298 16.203 143.816 63.991 1.00 41.04 O
ATOM 6 C5' G B1298 17.617 143.574 64.140 1.00 37.47 C
ATOM 7 C4' G B1298 18.023 142.371 63.328 1.00 36.57 C
ATOM 8 O4' G B1298 17.279 141.224 63.800 1.00 36.84 O
ATOM 9 C3' G B1298 17.712 142.453 61.842 1.00 36.92 C
ATOM 10 O3' G B1298 18.789 143.078 61.150 1.00 39.22 O
ATOM 11 C2' G B1298 17.576 140.988 61.449 1.00 37.69 C
ATOM 12 O2' G B1298 18.832 140.369 61.255 1.00 37.83 O
ATOM 13 C1' G B1298 16.931 140.396 62.704 1.00 37.62 C
ATOM 14 N9 G B1298 15.477 140.263 62.688 1.00 36.91 N
ATOM 15 C8 G B1298 14.562 141.196 63.109 1.00 37.26 C
ATOM 16 N7 G B1298 13.335 140.760 63.074 1.00 35.65 N
ATOM 17 C5 G B1298 13.442 139.474 62.579 1.00 36.06 C
ATOM 18 C6 G B1298 12.447 138.516 62.337 1.00 38.51 C
ATOM 19 O6 G B1298 11.232 138.616 62.517 1.00 43.81 O
ATOM 20 N1 G B1298 12.982 137.335 61.833 1.00 38.73 N
ATOM 21 C2 G B1298 14.312 137.116 61.590 1.00 37.81 C
ATOM 22 N2 G B1298 14.634 135.910 61.102 1.00 35.94 N
ATOM 23 N3 G B1298 15.257 138.012 61.811 1.00 37.84 N
ATOM 24 C4 G B1298 14.754 139.160 62.308 1.00 36.23 C
ATOM 25 P G B1299 18.506 144.314 60.157 1.00 38.76 P
ATOM 26 OP1 G B1299 19.763 145.090 60.006 1.00 40.21 O
ATOM 27 OP2 G B1299 17.282 145.004 60.631 1.00 40.37 O
ATOM 28 O5' G B1299 18.203 143.616 58.761 1.00 38.67 O
TER
ATOM 2 P G A1275 4.886 136.828 58.405 1.00 44.00 P
ATOM 3 OP1 G A1275 4.648 135.593 59.194 1.00 43.14 O
ATOM 4 OP2 G A1275 4.688 138.150 59.039 1.00 42.81 O
ATOM 5 O5' G A1275 6.363 136.800 57.826 1.00 43.26 O
ATOM 6 C5' G A1275 6.898 135.631 57.180 1.00 43.13 C
ATOM 7 C4' G A1275 8.406 135.711 57.182 1.00 43.33 C
ATOM 8 O4' G A1275 8.809 136.964 56.545 1.00 43.97 O
ATOM 9 C3' G A1275 9.016 135.756 58.581 1.00 41.77 C
ATOM 10 O3' G A1275 10.334 135.234 58.506 1.00 40.34 O
ATOM 11 C2' G A1275 9.076 137.249 58.859 1.00 41.80 C
ATOM 12 O2' G A1275 10.002 137.611 59.858 1.00 42.86 O
ATOM 13 C1' G A1275 9.493 137.770 57.485 1.00 42.39 C
ATOM 14 N9 G A1275 9.162 139.170 57.249 1.00 40.68 N
ATOM 15 C8 G A1275 7.995 139.820 57.573 1.00 40.67 C
ATOM 16 N7 G A1275 8.027 141.096 57.297 1.00 40.96 N
ATOM 17 C5 G A1275 9.284 141.296 56.741 1.00 41.47 C
ATOM 18 C6 G A1275 9.899 142.480 56.268 1.00 41.56 C
ATOM 19 O6 G A1275 9.447 143.631 56.258 1.00 41.91 O
ATOM 20 N1 G A1275 11.179 142.232 55.782 1.00 42.08 N
ATOM 21 C2 G A1275 11.794 141.004 55.763 1.00 41.45 C
ATOM 22 N2 G A1275 13.030 140.971 55.249 1.00 40.86 N
ATOM 23 N3 G A1275 11.237 139.894 56.213 1.00 40.02 N
ATOM 24 C4 G A1275 9.990 140.112 56.687 1.00 41.37 C
ATOM 25 P A A1276 10.916 134.342 59.703 1.00 39.73 P
ATOM 26 OP1 A A1276 9.853 133.413 60.181 1.00 38.69 O
ATOM 27 OP2 A A1276 11.576 135.253 60.677 1.00 37.90 O
ATOM 28 O5' A A1276 12.010 133.465 58.953 1.00 35.08 O
TER
ATOM 1 O3' U B1297 15.578 144.543 66.330 1.00 41.61 O
ATOM 2 P G B1298 15.478 144.988 64.794 1.00 42.69 P
ATOM 3 OP1 G B1298 16.282 146.237 64.681 1.00 44.23 O
ATOM 4 OP2 G B1298 14.051 144.994 64.401 1.00 43.10 O
ATOM 5 O5' G B1298 16.203 143.816 63.991 1.00 41.04 O
ATOM 6 C5' G B1298 17.617 143.574 64.140 1.00 37.47 C
ATOM 7 C4' G B1298 18.023 142.371 63.328 1.00 36.57 C
ATOM 8 O4' G B1298 17.279 141.224 63.800 1.00 36.84 O
ATOM 9 C3' G B1298 17.712 142.453 61.842 1.00 36.92 C
ATOM 10 O3' G B1298 18.789 143.078 61.150 1.00 39.22 O
ATOM 11 C2' G B1298 17.576 140.988 61.449 1.00 37.69 C
ATOM 12 O2' G B1298 18.832 140.369 61.255 1.00 37.83 O
ATOM 13 C1' G B1298 16.931 140.396 62.704 1.00 37.62 C
ATOM 14 N9 G B1298 15.477 140.263 62.688 1.00 36.91 N
ATOM 15 C8 G B1298 14.562 141.196 63.109 1.00 37.26 C
ATOM 16 N7 G B1298 13.335 140.760 63.074 1.00 35.65 N
ATOM 17 C5 G B1298 13.442 139.474 62.579 1.00 36.06 C
ATOM 18 C6 G B1298 12.447 138.516 62.337 1.00 38.51 C
ATOM 19 O6 G B1298 11.232 138.616 62.517 1.00 43.81 O
ATOM 20 N1 G B1298 12.982 137.335 61.833 1.00 38.73 N
ATOM 21 C2 G B1298 14.312 137.116 61.590 1.00 37.81 C
ATOM 22 N2 G B1298 14.634 135.910 61.102 1.00 35.94 N
ATOM 23 N3 G B1298 15.257 138.012 61.811 1.00 37.84 N
ATOM 24 C4 G B1298 14.754 139.160 62.308 1.00 36.23 C
ATOM 25 P G B1299 18.506 144.314 60.157 1.00 38.76 P
ATOM 26 OP1 G B1299 19.763 145.090 60.006 1.00 40.21 O
ATOM 27 OP2 G B1299 17.282 145.004 60.631 1.00 40.37 O
ATOM 28 O5' G B1299 18.203 143.616 58.761 1.00 38.67 O
TER
Atoms:
OP1: (4.648,135.593,59.194)
OP2: (4.688,138.150,59.039)
C3': (9.016,135.756,58.581)
C1': (9.493,137.770,57.485)
C5': (6.898,135.631,57.180)
O6: (9.447,143.631,56.258)
O4': (8.809,136.964,56.545)
C8: (7.995,139.820,57.573)
C2: (11.794,141.004,55.763)
C6: (9.899,142.480,56.268)
C5: (9.284,141.296,56.741)
C4: (9.990,140.112,56.687)
P: (4.886,136.828,58.405)
C4': (8.406,135.711,57.182)
C2': (9.076,137.249,58.859)
O2': (10.002,137.611,59.858)
N1: (11.179,142.232,55.782)
N2: (13.030,140.971,55.249)
N3: (11.237,139.894,56.213)
N7: (8.027,141.096,57.297)
N9: (9.162,139.170,57.249)
O5': (6.363,136.800,57.826)
O3': (10.334,135.234,58.506)
OP2: (4.688,138.150,59.039)
C3': (9.016,135.756,58.581)
C1': (9.493,137.770,57.485)
C5': (6.898,135.631,57.180)
O6: (9.447,143.631,56.258)
O4': (8.809,136.964,56.545)
C8: (7.995,139.820,57.573)
C2: (11.794,141.004,55.763)
C6: (9.899,142.480,56.268)
C5: (9.284,141.296,56.741)
C4: (9.990,140.112,56.687)
P: (4.886,136.828,58.405)
C4': (8.406,135.711,57.182)
C2': (9.076,137.249,58.859)
O2': (10.002,137.611,59.858)
N1: (11.179,142.232,55.782)
N2: (13.030,140.971,55.249)
N3: (11.237,139.894,56.213)
N7: (8.027,141.096,57.297)
N9: (9.162,139.170,57.249)
O5': (6.363,136.800,57.826)
O3': (10.334,135.234,58.506)
OP1: (16.282,146.237,64.681)
OP2: (14.051,144.994,64.401)
C3': (17.712,142.453,61.842)
C1': (16.931,140.396,62.704)
C5': (17.617,143.574,64.140)
O6: (11.232,138.616,62.517)
O4': (17.279,141.224,63.800)
C8: (14.562,141.196,63.109)
C2: (14.312,137.116,61.590)
C6: (12.447,138.516,62.337)
C5: (13.442,139.474,62.579)
C4: (14.754,139.160,62.308)
P: (15.478,144.988,64.794)
C4': (18.023,142.371,63.328)
C2': (17.576,140.988,61.449)
O2': (18.832,140.369,61.255)
N1: (12.982,137.335,61.833)
N2: (14.634,135.910,61.102)
N3: (15.257,138.012,61.811)
N7: (13.335,140.760,63.074)
N9: (15.477,140.263,62.688)
O5': (16.203,143.816,63.991)
O3': (18.789,143.078,61.150)
OP2: (14.051,144.994,64.401)
C3': (17.712,142.453,61.842)
C1': (16.931,140.396,62.704)
C5': (17.617,143.574,64.140)
O6: (11.232,138.616,62.517)
O4': (17.279,141.224,63.800)
C8: (14.562,141.196,63.109)
C2: (14.312,137.116,61.590)
C6: (12.447,138.516,62.337)
C5: (13.442,139.474,62.579)
C4: (14.754,139.160,62.308)
P: (15.478,144.988,64.794)
C4': (18.023,142.371,63.328)
C2': (17.576,140.988,61.449)
O2': (18.832,140.369,61.255)
N1: (12.982,137.335,61.833)
N2: (14.634,135.910,61.102)
N3: (15.257,138.012,61.811)
N7: (13.335,140.760,63.074)
N9: (15.477,140.263,62.688)
O5': (16.203,143.816,63.991)
O3': (18.789,143.078,61.150)
Image (generated by PyMOL):