Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:013:0506
Extra
PDB:
ATOM 1 O3' U A 12 34.471 148.288 73.847 1.00 35.76 O
ATOM 2 P G A 13 34.966 147.882 72.377 1.00 36.73 P
ATOM 3 OP1 G A 13 36.363 148.348 72.237 1.00 37.67 O
ATOM 4 OP2 G A 13 33.943 148.336 71.410 1.00 39.88 O
ATOM 5 O5' G A 13 34.967 146.290 72.379 1.00 38.51 O
ATOM 6 C5' G A 13 35.882 145.536 73.199 1.00 36.51 C
ATOM 7 C4' G A 13 35.547 144.070 73.116 1.00 35.49 C
ATOM 8 O4' G A 13 34.249 143.843 73.723 1.00 38.98 O
ATOM 9 C3' G A 13 35.398 143.548 71.699 1.00 34.65 C
ATOM 10 O3' G A 13 36.659 143.183 71.165 1.00 31.89 O
ATOM 11 C2' G A 13 34.460 142.364 71.879 1.00 36.33 C
ATOM 12 O2' G A 13 35.137 141.234 72.383 1.00 35.58 O
ATOM 13 C1' G A 13 33.517 142.895 72.961 1.00 37.46 C
ATOM 14 N9 G A 13 32.319 143.565 72.460 1.00 38.24 N
ATOM 15 C8 G A 13 32.235 144.840 71.960 1.00 37.21 C
ATOM 16 N7 G A 13 31.021 145.185 71.636 1.00 37.59 N
ATOM 17 C5 G A 13 30.258 144.065 71.927 1.00 37.73 C
ATOM 18 C6 G A 13 28.875 143.843 71.784 1.00 37.01 C
ATOM 19 O6 G A 13 28.017 144.617 71.361 1.00 40.71 O
ATOM 20 N1 G A 13 28.514 142.568 72.190 1.00 36.13 N
ATOM 21 C2 G A 13 29.374 141.625 72.673 1.00 37.85 C
ATOM 22 N2 G A 13 28.836 140.451 73.010 1.00 37.68 N
ATOM 23 N3 G A 13 30.673 141.817 72.815 1.00 40.53 N
ATOM 24 C4 G A 13 31.044 143.053 72.425 1.00 39.15 C
ATOM 25 P G A 14 36.962 143.416 69.605 1.00 29.95 P
ATOM 26 OP1 G A 14 38.426 143.338 69.412 1.00 29.80 O
ATOM 27 OP2 G A 14 36.230 144.636 69.180 1.00 31.61 O
ATOM 28 O5' G A 14 36.296 142.165 68.887 1.00 27.24 O
TER
ATOM 1 O3' U B 505 21.189 141.238 64.706 1.00 33.78 O
ATOM 2 P G B 506 20.920 141.922 66.130 1.00 37.91 P
ATOM 3 OP1 G B 506 19.825 141.145 66.764 1.00 36.10 O
ATOM 4 OP2 G B 506 20.778 143.392 65.947 1.00 34.83 O
ATOM 5 O5' G B 506 22.249 141.651 66.956 1.00 37.68 O
ATOM 6 C5' G B 506 22.767 140.324 67.080 1.00 37.36 C
ATOM 7 C4' G B 506 24.167 140.361 67.632 1.00 36.84 C
ATOM 8 O4' G B 506 25.070 140.964 66.652 1.00 37.31 O
ATOM 9 C3' G B 506 24.330 141.183 68.910 1.00 35.35 C
ATOM 10 O3' G B 506 25.205 140.500 69.799 1.00 35.90 O
ATOM 11 C2' G B 506 25.012 142.448 68.403 1.00 33.66 C
ATOM 12 O2' G B 506 25.766 143.125 69.382 1.00 31.96 O
ATOM 13 C1' G B 506 25.914 141.857 67.327 1.00 34.85 C
ATOM 14 N9 G B 506 26.502 142.817 66.399 1.00 34.82 N
ATOM 15 C8 G B 506 25.942 143.979 65.920 1.00 35.60 C
ATOM 16 N7 G B 506 26.789 144.721 65.259 1.00 34.99 N
ATOM 17 C5 G B 506 27.966 143.985 65.269 1.00 36.57 C
ATOM 18 C6 G B 506 29.246 144.292 64.745 1.00 36.83 C
ATOM 19 O6 G B 506 29.614 145.321 64.169 1.00 39.92 O
ATOM 20 N1 G B 506 30.150 143.256 64.961 1.00 36.26 N
ATOM 21 C2 G B 506 29.861 142.078 65.604 1.00 36.56 C
ATOM 22 N2 G B 506 30.861 141.193 65.705 1.00 34.12 N
ATOM 23 N3 G B 506 28.676 141.788 66.113 1.00 36.90 N
ATOM 24 C4 G B 506 27.785 142.782 65.918 1.00 36.07 C
ATOM 25 P A B 507 24.955 140.585 71.382 1.00 35.85 P
ATOM 26 OP1 A B 507 23.523 140.885 71.630 1.00 36.35 O
ATOM 27 OP2 A B 507 25.998 141.467 71.961 1.00 34.22 O
ATOM 28 O5' A B 507 25.209 139.096 71.866 1.00 34.86 O
TER
ATOM 2 P G A 13 34.966 147.882 72.377 1.00 36.73 P
ATOM 3 OP1 G A 13 36.363 148.348 72.237 1.00 37.67 O
ATOM 4 OP2 G A 13 33.943 148.336 71.410 1.00 39.88 O
ATOM 5 O5' G A 13 34.967 146.290 72.379 1.00 38.51 O
ATOM 6 C5' G A 13 35.882 145.536 73.199 1.00 36.51 C
ATOM 7 C4' G A 13 35.547 144.070 73.116 1.00 35.49 C
ATOM 8 O4' G A 13 34.249 143.843 73.723 1.00 38.98 O
ATOM 9 C3' G A 13 35.398 143.548 71.699 1.00 34.65 C
ATOM 10 O3' G A 13 36.659 143.183 71.165 1.00 31.89 O
ATOM 11 C2' G A 13 34.460 142.364 71.879 1.00 36.33 C
ATOM 12 O2' G A 13 35.137 141.234 72.383 1.00 35.58 O
ATOM 13 C1' G A 13 33.517 142.895 72.961 1.00 37.46 C
ATOM 14 N9 G A 13 32.319 143.565 72.460 1.00 38.24 N
ATOM 15 C8 G A 13 32.235 144.840 71.960 1.00 37.21 C
ATOM 16 N7 G A 13 31.021 145.185 71.636 1.00 37.59 N
ATOM 17 C5 G A 13 30.258 144.065 71.927 1.00 37.73 C
ATOM 18 C6 G A 13 28.875 143.843 71.784 1.00 37.01 C
ATOM 19 O6 G A 13 28.017 144.617 71.361 1.00 40.71 O
ATOM 20 N1 G A 13 28.514 142.568 72.190 1.00 36.13 N
ATOM 21 C2 G A 13 29.374 141.625 72.673 1.00 37.85 C
ATOM 22 N2 G A 13 28.836 140.451 73.010 1.00 37.68 N
ATOM 23 N3 G A 13 30.673 141.817 72.815 1.00 40.53 N
ATOM 24 C4 G A 13 31.044 143.053 72.425 1.00 39.15 C
ATOM 25 P G A 14 36.962 143.416 69.605 1.00 29.95 P
ATOM 26 OP1 G A 14 38.426 143.338 69.412 1.00 29.80 O
ATOM 27 OP2 G A 14 36.230 144.636 69.180 1.00 31.61 O
ATOM 28 O5' G A 14 36.296 142.165 68.887 1.00 27.24 O
TER
ATOM 1 O3' U B 505 21.189 141.238 64.706 1.00 33.78 O
ATOM 2 P G B 506 20.920 141.922 66.130 1.00 37.91 P
ATOM 3 OP1 G B 506 19.825 141.145 66.764 1.00 36.10 O
ATOM 4 OP2 G B 506 20.778 143.392 65.947 1.00 34.83 O
ATOM 5 O5' G B 506 22.249 141.651 66.956 1.00 37.68 O
ATOM 6 C5' G B 506 22.767 140.324 67.080 1.00 37.36 C
ATOM 7 C4' G B 506 24.167 140.361 67.632 1.00 36.84 C
ATOM 8 O4' G B 506 25.070 140.964 66.652 1.00 37.31 O
ATOM 9 C3' G B 506 24.330 141.183 68.910 1.00 35.35 C
ATOM 10 O3' G B 506 25.205 140.500 69.799 1.00 35.90 O
ATOM 11 C2' G B 506 25.012 142.448 68.403 1.00 33.66 C
ATOM 12 O2' G B 506 25.766 143.125 69.382 1.00 31.96 O
ATOM 13 C1' G B 506 25.914 141.857 67.327 1.00 34.85 C
ATOM 14 N9 G B 506 26.502 142.817 66.399 1.00 34.82 N
ATOM 15 C8 G B 506 25.942 143.979 65.920 1.00 35.60 C
ATOM 16 N7 G B 506 26.789 144.721 65.259 1.00 34.99 N
ATOM 17 C5 G B 506 27.966 143.985 65.269 1.00 36.57 C
ATOM 18 C6 G B 506 29.246 144.292 64.745 1.00 36.83 C
ATOM 19 O6 G B 506 29.614 145.321 64.169 1.00 39.92 O
ATOM 20 N1 G B 506 30.150 143.256 64.961 1.00 36.26 N
ATOM 21 C2 G B 506 29.861 142.078 65.604 1.00 36.56 C
ATOM 22 N2 G B 506 30.861 141.193 65.705 1.00 34.12 N
ATOM 23 N3 G B 506 28.676 141.788 66.113 1.00 36.90 N
ATOM 24 C4 G B 506 27.785 142.782 65.918 1.00 36.07 C
ATOM 25 P A B 507 24.955 140.585 71.382 1.00 35.85 P
ATOM 26 OP1 A B 507 23.523 140.885 71.630 1.00 36.35 O
ATOM 27 OP2 A B 507 25.998 141.467 71.961 1.00 34.22 O
ATOM 28 O5' A B 507 25.209 139.096 71.866 1.00 34.86 O
TER
Atoms:
OP1: (36.363,148.348,72.237)
OP2: (33.943,148.336,71.410)
C3': (35.398,143.548,71.699)
C1': (33.517,142.895,72.961)
C5': (35.882,145.536,73.199)
O6: (28.017,144.617,71.361)
O4': (34.249,143.843,73.723)
C8: (32.235,144.840,71.960)
C2: (29.374,141.625,72.673)
C6: (28.875,143.843,71.784)
C5: (30.258,144.065,71.927)
C4: (31.044,143.053,72.425)
P: (34.966,147.882,72.377)
C4': (35.547,144.070,73.116)
C2': (34.460,142.364,71.879)
O2': (35.137,141.234,72.383)
N1: (28.514,142.568,72.190)
N2: (28.836,140.451,73.010)
N3: (30.673,141.817,72.815)
N7: (31.021,145.185,71.636)
N9: (32.319,143.565,72.460)
O5': (34.967,146.290,72.379)
O3': (36.659,143.183,71.165)
OP2: (33.943,148.336,71.410)
C3': (35.398,143.548,71.699)
C1': (33.517,142.895,72.961)
C5': (35.882,145.536,73.199)
O6: (28.017,144.617,71.361)
O4': (34.249,143.843,73.723)
C8: (32.235,144.840,71.960)
C2: (29.374,141.625,72.673)
C6: (28.875,143.843,71.784)
C5: (30.258,144.065,71.927)
C4: (31.044,143.053,72.425)
P: (34.966,147.882,72.377)
C4': (35.547,144.070,73.116)
C2': (34.460,142.364,71.879)
O2': (35.137,141.234,72.383)
N1: (28.514,142.568,72.190)
N2: (28.836,140.451,73.010)
N3: (30.673,141.817,72.815)
N7: (31.021,145.185,71.636)
N9: (32.319,143.565,72.460)
O5': (34.967,146.290,72.379)
O3': (36.659,143.183,71.165)
OP1: (19.825,141.145,66.764)
OP2: (20.778,143.392,65.947)
C3': (24.330,141.183,68.910)
C1': (25.914,141.857,67.327)
C5': (22.767,140.324,67.080)
O6: (29.614,145.321,64.169)
O4': (25.070,140.964,66.652)
C8: (25.942,143.979,65.920)
C2: (29.861,142.078,65.604)
C6: (29.246,144.292,64.745)
C5: (27.966,143.985,65.269)
C4: (27.785,142.782,65.918)
P: (20.920,141.922,66.130)
C4': (24.167,140.361,67.632)
C2': (25.012,142.448,68.403)
O2': (25.766,143.125,69.382)
N1: (30.150,143.256,64.961)
N2: (30.861,141.193,65.705)
N3: (28.676,141.788,66.113)
N7: (26.789,144.721,65.259)
N9: (26.502,142.817,66.399)
O5': (22.249,141.651,66.956)
O3': (25.205,140.500,69.799)
OP2: (20.778,143.392,65.947)
C3': (24.330,141.183,68.910)
C1': (25.914,141.857,67.327)
C5': (22.767,140.324,67.080)
O6: (29.614,145.321,64.169)
O4': (25.070,140.964,66.652)
C8: (25.942,143.979,65.920)
C2: (29.861,142.078,65.604)
C6: (29.246,144.292,64.745)
C5: (27.966,143.985,65.269)
C4: (27.785,142.782,65.918)
P: (20.920,141.922,66.130)
C4': (24.167,140.361,67.632)
C2': (25.012,142.448,68.403)
O2': (25.766,143.125,69.382)
N1: (30.150,143.256,64.961)
N2: (30.861,141.193,65.705)
N3: (28.676,141.788,66.113)
N7: (26.789,144.721,65.259)
N9: (26.502,142.817,66.399)
O5': (22.249,141.651,66.956)
O3': (25.205,140.500,69.799)
Image (generated by PyMOL):