Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:013:0506
Extra
PDB:
ATOM 1 O3' U A 12 34.524 148.814 74.019 1.00 45.42 O
ATOM 2 P G A 13 35.051 148.300 72.595 1.00 46.02 P
ATOM 3 OP1 G A 13 36.469 148.690 72.414 1.00 45.74 O
ATOM 4 OP2 G A 13 34.045 148.733 71.607 1.00 48.68 O
ATOM 5 O5' G A 13 34.977 146.711 72.694 1.00 46.55 O
ATOM 6 C5' G A 13 35.935 145.949 73.452 1.00 43.77 C
ATOM 7 C4' G A 13 35.598 144.481 73.360 1.00 44.94 C
ATOM 8 O4' G A 13 34.287 144.256 73.952 1.00 46.79 O
ATOM 9 C3' G A 13 35.467 143.956 71.940 1.00 43.56 C
ATOM 10 O3' G A 13 36.732 143.577 71.424 1.00 40.53 O
ATOM 11 C2' G A 13 34.510 142.781 72.104 1.00 44.68 C
ATOM 12 O2' G A 13 35.154 141.637 72.614 1.00 46.42 O
ATOM 13 C1' G A 13 33.561 143.314 73.179 1.00 45.51 C
ATOM 14 N9 G A 13 32.390 144.002 72.653 1.00 46.84 N
ATOM 15 C8 G A 13 32.353 145.275 72.144 1.00 47.15 C
ATOM 16 N7 G A 13 31.157 145.653 71.797 1.00 47.80 N
ATOM 17 C5 G A 13 30.357 144.559 72.081 1.00 47.36 C
ATOM 18 C6 G A 13 28.967 144.386 71.928 1.00 47.68 C
ATOM 19 O6 G A 13 28.137 145.196 71.503 1.00 49.89 O
ATOM 20 N1 G A 13 28.559 143.123 72.335 1.00 47.65 N
ATOM 21 C2 G A 13 29.386 142.157 72.837 1.00 48.23 C
ATOM 22 N2 G A 13 28.803 141.006 73.184 1.00 47.57 N
ATOM 23 N3 G A 13 30.690 142.308 72.991 1.00 48.83 N
ATOM 24 C4 G A 13 31.104 143.526 72.596 1.00 47.42 C
ATOM 25 P G A 14 37.042 143.762 69.862 1.00 41.43 P
ATOM 26 OP1 G A 14 38.490 143.606 69.626 1.00 43.90 O
ATOM 27 OP2 G A 14 36.363 145.007 69.425 1.00 44.50 O
ATOM 28 O5' G A 14 36.322 142.530 69.165 1.00 40.54 O
TER
ATOM 1 O3' U B 505 21.316 141.620 65.027 1.00 45.43 O
ATOM 2 P G B 506 21.027 142.313 66.451 1.00 49.17 P
ATOM 3 OP1 G B 506 19.888 141.565 67.049 1.00 48.24 O
ATOM 4 OP2 G B 506 20.935 143.795 66.275 1.00 46.53 O
ATOM 5 O5' G B 506 22.310 141.986 67.329 1.00 47.99 O
ATOM 6 C5' G B 506 22.849 140.661 67.358 1.00 47.66 C
ATOM 7 C4' G B 506 24.270 140.691 67.850 1.00 46.34 C
ATOM 8 O4' G B 506 25.126 141.353 66.868 1.00 45.35 O
ATOM 9 C3' G B 506 24.458 141.469 69.152 1.00 45.61 C
ATOM 10 O3' G B 506 25.325 140.754 70.016 1.00 45.00 O
ATOM 11 C2' G B 506 25.145 142.746 68.686 1.00 44.59 C
ATOM 12 O2' G B 506 25.928 143.347 69.693 1.00 43.84 O
ATOM 13 C1' G B 506 26.008 142.193 67.561 1.00 44.99 C
ATOM 14 N9 G B 506 26.595 143.184 66.662 1.00 45.59 N
ATOM 15 C8 G B 506 26.032 144.354 66.202 1.00 46.19 C
ATOM 16 N7 G B 506 26.879 145.107 65.549 1.00 44.51 N
ATOM 17 C5 G B 506 28.057 144.372 65.546 1.00 45.98 C
ATOM 18 C6 G B 506 29.340 144.683 65.018 1.00 45.48 C
ATOM 19 O6 G B 506 29.712 145.715 64.440 1.00 47.05 O
ATOM 20 N1 G B 506 30.241 143.649 65.232 1.00 44.06 N
ATOM 21 C2 G B 506 29.956 142.471 65.874 1.00 45.31 C
ATOM 22 N2 G B 506 30.967 141.594 65.986 1.00 45.11 N
ATOM 23 N3 G B 506 28.774 142.172 66.376 1.00 44.87 N
ATOM 24 C4 G B 506 27.881 143.161 66.185 1.00 45.56 C
ATOM 25 P A B 507 25.119 140.855 71.601 1.00 45.12 P
ATOM 26 OP1 A B 507 23.698 141.151 71.903 1.00 45.31 O
ATOM 27 OP2 A B 507 26.176 141.768 72.101 1.00 44.51 O
ATOM 28 O5' A B 507 25.412 139.376 72.104 1.00 43.07 O
TER
ATOM 2 P G A 13 35.051 148.300 72.595 1.00 46.02 P
ATOM 3 OP1 G A 13 36.469 148.690 72.414 1.00 45.74 O
ATOM 4 OP2 G A 13 34.045 148.733 71.607 1.00 48.68 O
ATOM 5 O5' G A 13 34.977 146.711 72.694 1.00 46.55 O
ATOM 6 C5' G A 13 35.935 145.949 73.452 1.00 43.77 C
ATOM 7 C4' G A 13 35.598 144.481 73.360 1.00 44.94 C
ATOM 8 O4' G A 13 34.287 144.256 73.952 1.00 46.79 O
ATOM 9 C3' G A 13 35.467 143.956 71.940 1.00 43.56 C
ATOM 10 O3' G A 13 36.732 143.577 71.424 1.00 40.53 O
ATOM 11 C2' G A 13 34.510 142.781 72.104 1.00 44.68 C
ATOM 12 O2' G A 13 35.154 141.637 72.614 1.00 46.42 O
ATOM 13 C1' G A 13 33.561 143.314 73.179 1.00 45.51 C
ATOM 14 N9 G A 13 32.390 144.002 72.653 1.00 46.84 N
ATOM 15 C8 G A 13 32.353 145.275 72.144 1.00 47.15 C
ATOM 16 N7 G A 13 31.157 145.653 71.797 1.00 47.80 N
ATOM 17 C5 G A 13 30.357 144.559 72.081 1.00 47.36 C
ATOM 18 C6 G A 13 28.967 144.386 71.928 1.00 47.68 C
ATOM 19 O6 G A 13 28.137 145.196 71.503 1.00 49.89 O
ATOM 20 N1 G A 13 28.559 143.123 72.335 1.00 47.65 N
ATOM 21 C2 G A 13 29.386 142.157 72.837 1.00 48.23 C
ATOM 22 N2 G A 13 28.803 141.006 73.184 1.00 47.57 N
ATOM 23 N3 G A 13 30.690 142.308 72.991 1.00 48.83 N
ATOM 24 C4 G A 13 31.104 143.526 72.596 1.00 47.42 C
ATOM 25 P G A 14 37.042 143.762 69.862 1.00 41.43 P
ATOM 26 OP1 G A 14 38.490 143.606 69.626 1.00 43.90 O
ATOM 27 OP2 G A 14 36.363 145.007 69.425 1.00 44.50 O
ATOM 28 O5' G A 14 36.322 142.530 69.165 1.00 40.54 O
TER
ATOM 1 O3' U B 505 21.316 141.620 65.027 1.00 45.43 O
ATOM 2 P G B 506 21.027 142.313 66.451 1.00 49.17 P
ATOM 3 OP1 G B 506 19.888 141.565 67.049 1.00 48.24 O
ATOM 4 OP2 G B 506 20.935 143.795 66.275 1.00 46.53 O
ATOM 5 O5' G B 506 22.310 141.986 67.329 1.00 47.99 O
ATOM 6 C5' G B 506 22.849 140.661 67.358 1.00 47.66 C
ATOM 7 C4' G B 506 24.270 140.691 67.850 1.00 46.34 C
ATOM 8 O4' G B 506 25.126 141.353 66.868 1.00 45.35 O
ATOM 9 C3' G B 506 24.458 141.469 69.152 1.00 45.61 C
ATOM 10 O3' G B 506 25.325 140.754 70.016 1.00 45.00 O
ATOM 11 C2' G B 506 25.145 142.746 68.686 1.00 44.59 C
ATOM 12 O2' G B 506 25.928 143.347 69.693 1.00 43.84 O
ATOM 13 C1' G B 506 26.008 142.193 67.561 1.00 44.99 C
ATOM 14 N9 G B 506 26.595 143.184 66.662 1.00 45.59 N
ATOM 15 C8 G B 506 26.032 144.354 66.202 1.00 46.19 C
ATOM 16 N7 G B 506 26.879 145.107 65.549 1.00 44.51 N
ATOM 17 C5 G B 506 28.057 144.372 65.546 1.00 45.98 C
ATOM 18 C6 G B 506 29.340 144.683 65.018 1.00 45.48 C
ATOM 19 O6 G B 506 29.712 145.715 64.440 1.00 47.05 O
ATOM 20 N1 G B 506 30.241 143.649 65.232 1.00 44.06 N
ATOM 21 C2 G B 506 29.956 142.471 65.874 1.00 45.31 C
ATOM 22 N2 G B 506 30.967 141.594 65.986 1.00 45.11 N
ATOM 23 N3 G B 506 28.774 142.172 66.376 1.00 44.87 N
ATOM 24 C4 G B 506 27.881 143.161 66.185 1.00 45.56 C
ATOM 25 P A B 507 25.119 140.855 71.601 1.00 45.12 P
ATOM 26 OP1 A B 507 23.698 141.151 71.903 1.00 45.31 O
ATOM 27 OP2 A B 507 26.176 141.768 72.101 1.00 44.51 O
ATOM 28 O5' A B 507 25.412 139.376 72.104 1.00 43.07 O
TER
Atoms:
OP1: (36.469,148.690,72.414)
OP2: (34.045,148.733,71.607)
C3': (35.467,143.956,71.940)
C1': (33.561,143.314,73.179)
C5': (35.935,145.949,73.452)
O6: (28.137,145.196,71.503)
O4': (34.287,144.256,73.952)
C8: (32.353,145.275,72.144)
C2: (29.386,142.157,72.837)
C6: (28.967,144.386,71.928)
C5: (30.357,144.559,72.081)
C4: (31.104,143.526,72.596)
P: (35.051,148.300,72.595)
C4': (35.598,144.481,73.360)
C2': (34.510,142.781,72.104)
O2': (35.154,141.637,72.614)
N1: (28.559,143.123,72.335)
N2: (28.803,141.006,73.184)
N3: (30.690,142.308,72.991)
N7: (31.157,145.653,71.797)
N9: (32.390,144.002,72.653)
O5': (34.977,146.711,72.694)
O3': (36.732,143.577,71.424)
OP2: (34.045,148.733,71.607)
C3': (35.467,143.956,71.940)
C1': (33.561,143.314,73.179)
C5': (35.935,145.949,73.452)
O6: (28.137,145.196,71.503)
O4': (34.287,144.256,73.952)
C8: (32.353,145.275,72.144)
C2: (29.386,142.157,72.837)
C6: (28.967,144.386,71.928)
C5: (30.357,144.559,72.081)
C4: (31.104,143.526,72.596)
P: (35.051,148.300,72.595)
C4': (35.598,144.481,73.360)
C2': (34.510,142.781,72.104)
O2': (35.154,141.637,72.614)
N1: (28.559,143.123,72.335)
N2: (28.803,141.006,73.184)
N3: (30.690,142.308,72.991)
N7: (31.157,145.653,71.797)
N9: (32.390,144.002,72.653)
O5': (34.977,146.711,72.694)
O3': (36.732,143.577,71.424)
OP1: (19.888,141.565,67.049)
OP2: (20.935,143.795,66.275)
C3': (24.458,141.469,69.152)
C1': (26.008,142.193,67.561)
C5': (22.849,140.661,67.358)
O6: (29.712,145.715,64.440)
O4': (25.126,141.353,66.868)
C8: (26.032,144.354,66.202)
C2: (29.956,142.471,65.874)
C6: (29.340,144.683,65.018)
C5: (28.057,144.372,65.546)
C4: (27.881,143.161,66.185)
P: (21.027,142.313,66.451)
C4': (24.270,140.691,67.850)
C2': (25.145,142.746,68.686)
O2': (25.928,143.347,69.693)
N1: (30.241,143.649,65.232)
N2: (30.967,141.594,65.986)
N3: (28.774,142.172,66.376)
N7: (26.879,145.107,65.549)
N9: (26.595,143.184,66.662)
O5': (22.310,141.986,67.329)
O3': (25.325,140.754,70.016)
OP2: (20.935,143.795,66.275)
C3': (24.458,141.469,69.152)
C1': (26.008,142.193,67.561)
C5': (22.849,140.661,67.358)
O6: (29.712,145.715,64.440)
O4': (25.126,141.353,66.868)
C8: (26.032,144.354,66.202)
C2: (29.956,142.471,65.874)
C6: (29.340,144.683,65.018)
C5: (28.057,144.372,65.546)
C4: (27.881,143.161,66.185)
P: (21.027,142.313,66.451)
C4': (24.270,140.691,67.850)
C2': (25.145,142.746,68.686)
O2': (25.928,143.347,69.693)
N1: (30.241,143.649,65.232)
N2: (30.967,141.594,65.986)
N3: (28.774,142.172,66.376)
N7: (26.879,145.107,65.549)
N9: (26.595,143.184,66.662)
O5': (22.310,141.986,67.329)
O3': (25.325,140.754,70.016)
Image (generated by PyMOL):