Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:013:0506
Extra
PDB:
ATOM 1 O3' U A 12 34.319 148.496 73.819 1.00 44.59 O
ATOM 2 P G A 13 34.775 148.099 72.335 1.00 44.82 P
ATOM 3 OP1 G A 13 36.158 148.591 72.145 1.00 44.93 O
ATOM 4 OP2 G A 13 33.710 148.536 71.408 1.00 47.97 O
ATOM 5 O5' G A 13 34.791 146.508 72.333 1.00 44.80 O
ATOM 6 C5' G A 13 35.729 145.765 73.129 1.00 44.02 C
ATOM 7 C4' G A 13 35.388 144.298 73.073 1.00 43.53 C
ATOM 8 O4' G A 13 34.083 144.095 73.673 1.00 46.35 O
ATOM 9 C3' G A 13 35.245 143.756 71.666 1.00 41.41 C
ATOM 10 O3' G A 13 36.508 143.375 71.159 1.00 39.04 O
ATOM 11 C2' G A 13 34.285 142.590 71.847 1.00 42.64 C
ATOM 12 O2' G A 13 34.923 141.443 72.357 1.00 39.87 O
ATOM 13 C1' G A 13 33.348 143.145 72.920 1.00 44.96 C
ATOM 14 N9 G A 13 32.154 143.820 72.421 1.00 47.02 N
ATOM 15 C8 G A 13 32.069 145.107 71.951 1.00 46.87 C
ATOM 16 N7 G A 13 30.854 145.458 71.638 1.00 47.44 N
ATOM 17 C5 G A 13 30.092 144.331 71.902 1.00 47.22 C
ATOM 18 C6 G A 13 28.703 144.115 71.764 1.00 47.39 C
ATOM 19 O6 G A 13 27.835 144.907 71.368 1.00 50.68 O
ATOM 20 N1 G A 13 28.348 142.825 72.142 1.00 45.80 N
ATOM 21 C2 G A 13 29.217 141.868 72.594 1.00 44.98 C
ATOM 22 N2 G A 13 28.687 140.688 72.906 1.00 43.66 N
ATOM 23 N3 G A 13 30.514 142.057 72.729 1.00 47.07 N
ATOM 24 C4 G A 13 30.881 143.305 72.369 1.00 47.56 C
ATOM 25 P G A 14 36.809 143.521 69.591 1.00 37.24 P
ATOM 26 OP1 G A 14 38.259 143.309 69.364 1.00 37.49 O
ATOM 27 OP2 G A 14 36.174 144.785 69.142 1.00 38.70 O
ATOM 28 O5' G A 14 36.029 142.300 68.943 1.00 34.98 O
TER
ATOM 1 O3' U B 505 21.110 141.459 64.655 1.00 37.56 O
ATOM 2 P G B 506 20.881 142.186 66.067 1.00 40.64 P
ATOM 3 OP1 G B 506 19.779 141.474 66.749 1.00 38.59 O
ATOM 4 OP2 G B 506 20.783 143.651 65.833 1.00 38.59 O
ATOM 5 O5' G B 506 22.215 141.877 66.872 1.00 41.35 O
ATOM 6 C5' G B 506 22.685 140.527 66.994 1.00 42.61 C
ATOM 7 C4' G B 506 24.067 140.501 67.593 1.00 42.09 C
ATOM 8 O4' G B 506 25.032 141.061 66.649 1.00 40.91 O
ATOM 9 C3' G B 506 24.230 141.292 68.891 1.00 41.16 C
ATOM 10 O3' G B 506 25.090 140.574 69.768 1.00 40.55 O
ATOM 11 C2' G B 506 24.921 142.563 68.409 1.00 40.80 C
ATOM 12 O2' G B 506 25.663 143.260 69.392 1.00 39.86 O
ATOM 13 C1' G B 506 25.837 141.984 67.337 1.00 40.53 C
ATOM 14 N9 G B 506 26.400 142.962 66.416 1.00 40.57 N
ATOM 15 C8 G B 506 25.816 144.117 65.952 1.00 41.28 C
ATOM 16 N7 G B 506 26.642 144.872 65.281 1.00 41.30 N
ATOM 17 C5 G B 506 27.829 144.155 65.273 1.00 41.19 C
ATOM 18 C6 G B 506 29.094 144.483 64.732 1.00 40.13 C
ATOM 19 O6 G B 506 29.439 145.521 64.165 1.00 39.27 O
ATOM 20 N1 G B 506 30.013 143.456 64.923 1.00 41.13 N
ATOM 21 C2 G B 506 29.751 142.269 65.561 1.00 41.86 C
ATOM 22 N2 G B 506 30.758 141.392 65.625 1.00 40.96 N
ATOM 23 N3 G B 506 28.583 141.964 66.095 1.00 42.33 N
ATOM 24 C4 G B 506 27.676 142.948 65.919 1.00 41.85 C
ATOM 25 P A B 507 24.841 140.631 71.349 1.00 40.37 P
ATOM 26 OP1 A B 507 23.405 140.871 71.601 1.00 42.51 O
ATOM 27 OP2 A B 507 25.844 141.550 71.936 1.00 41.33 O
ATOM 28 O5' A B 507 25.160 139.151 71.824 1.00 39.39 O
TER
ATOM 2 P G A 13 34.775 148.099 72.335 1.00 44.82 P
ATOM 3 OP1 G A 13 36.158 148.591 72.145 1.00 44.93 O
ATOM 4 OP2 G A 13 33.710 148.536 71.408 1.00 47.97 O
ATOM 5 O5' G A 13 34.791 146.508 72.333 1.00 44.80 O
ATOM 6 C5' G A 13 35.729 145.765 73.129 1.00 44.02 C
ATOM 7 C4' G A 13 35.388 144.298 73.073 1.00 43.53 C
ATOM 8 O4' G A 13 34.083 144.095 73.673 1.00 46.35 O
ATOM 9 C3' G A 13 35.245 143.756 71.666 1.00 41.41 C
ATOM 10 O3' G A 13 36.508 143.375 71.159 1.00 39.04 O
ATOM 11 C2' G A 13 34.285 142.590 71.847 1.00 42.64 C
ATOM 12 O2' G A 13 34.923 141.443 72.357 1.00 39.87 O
ATOM 13 C1' G A 13 33.348 143.145 72.920 1.00 44.96 C
ATOM 14 N9 G A 13 32.154 143.820 72.421 1.00 47.02 N
ATOM 15 C8 G A 13 32.069 145.107 71.951 1.00 46.87 C
ATOM 16 N7 G A 13 30.854 145.458 71.638 1.00 47.44 N
ATOM 17 C5 G A 13 30.092 144.331 71.902 1.00 47.22 C
ATOM 18 C6 G A 13 28.703 144.115 71.764 1.00 47.39 C
ATOM 19 O6 G A 13 27.835 144.907 71.368 1.00 50.68 O
ATOM 20 N1 G A 13 28.348 142.825 72.142 1.00 45.80 N
ATOM 21 C2 G A 13 29.217 141.868 72.594 1.00 44.98 C
ATOM 22 N2 G A 13 28.687 140.688 72.906 1.00 43.66 N
ATOM 23 N3 G A 13 30.514 142.057 72.729 1.00 47.07 N
ATOM 24 C4 G A 13 30.881 143.305 72.369 1.00 47.56 C
ATOM 25 P G A 14 36.809 143.521 69.591 1.00 37.24 P
ATOM 26 OP1 G A 14 38.259 143.309 69.364 1.00 37.49 O
ATOM 27 OP2 G A 14 36.174 144.785 69.142 1.00 38.70 O
ATOM 28 O5' G A 14 36.029 142.300 68.943 1.00 34.98 O
TER
ATOM 1 O3' U B 505 21.110 141.459 64.655 1.00 37.56 O
ATOM 2 P G B 506 20.881 142.186 66.067 1.00 40.64 P
ATOM 3 OP1 G B 506 19.779 141.474 66.749 1.00 38.59 O
ATOM 4 OP2 G B 506 20.783 143.651 65.833 1.00 38.59 O
ATOM 5 O5' G B 506 22.215 141.877 66.872 1.00 41.35 O
ATOM 6 C5' G B 506 22.685 140.527 66.994 1.00 42.61 C
ATOM 7 C4' G B 506 24.067 140.501 67.593 1.00 42.09 C
ATOM 8 O4' G B 506 25.032 141.061 66.649 1.00 40.91 O
ATOM 9 C3' G B 506 24.230 141.292 68.891 1.00 41.16 C
ATOM 10 O3' G B 506 25.090 140.574 69.768 1.00 40.55 O
ATOM 11 C2' G B 506 24.921 142.563 68.409 1.00 40.80 C
ATOM 12 O2' G B 506 25.663 143.260 69.392 1.00 39.86 O
ATOM 13 C1' G B 506 25.837 141.984 67.337 1.00 40.53 C
ATOM 14 N9 G B 506 26.400 142.962 66.416 1.00 40.57 N
ATOM 15 C8 G B 506 25.816 144.117 65.952 1.00 41.28 C
ATOM 16 N7 G B 506 26.642 144.872 65.281 1.00 41.30 N
ATOM 17 C5 G B 506 27.829 144.155 65.273 1.00 41.19 C
ATOM 18 C6 G B 506 29.094 144.483 64.732 1.00 40.13 C
ATOM 19 O6 G B 506 29.439 145.521 64.165 1.00 39.27 O
ATOM 20 N1 G B 506 30.013 143.456 64.923 1.00 41.13 N
ATOM 21 C2 G B 506 29.751 142.269 65.561 1.00 41.86 C
ATOM 22 N2 G B 506 30.758 141.392 65.625 1.00 40.96 N
ATOM 23 N3 G B 506 28.583 141.964 66.095 1.00 42.33 N
ATOM 24 C4 G B 506 27.676 142.948 65.919 1.00 41.85 C
ATOM 25 P A B 507 24.841 140.631 71.349 1.00 40.37 P
ATOM 26 OP1 A B 507 23.405 140.871 71.601 1.00 42.51 O
ATOM 27 OP2 A B 507 25.844 141.550 71.936 1.00 41.33 O
ATOM 28 O5' A B 507 25.160 139.151 71.824 1.00 39.39 O
TER
Atoms:
OP1: (36.158,148.591,72.145)
OP2: (33.710,148.536,71.408)
C3': (35.245,143.756,71.666)
C1': (33.348,143.145,72.920)
C5': (35.729,145.765,73.129)
O6: (27.835,144.907,71.368)
O4': (34.083,144.095,73.673)
C8: (32.069,145.107,71.951)
C2: (29.217,141.868,72.594)
C6: (28.703,144.115,71.764)
C5: (30.092,144.331,71.902)
C4: (30.881,143.305,72.369)
P: (34.775,148.099,72.335)
C4': (35.388,144.298,73.073)
C2': (34.285,142.590,71.847)
O2': (34.923,141.443,72.357)
N1: (28.348,142.825,72.142)
N2: (28.687,140.688,72.906)
N3: (30.514,142.057,72.729)
N7: (30.854,145.458,71.638)
N9: (32.154,143.820,72.421)
O5': (34.791,146.508,72.333)
O3': (36.508,143.375,71.159)
OP2: (33.710,148.536,71.408)
C3': (35.245,143.756,71.666)
C1': (33.348,143.145,72.920)
C5': (35.729,145.765,73.129)
O6: (27.835,144.907,71.368)
O4': (34.083,144.095,73.673)
C8: (32.069,145.107,71.951)
C2: (29.217,141.868,72.594)
C6: (28.703,144.115,71.764)
C5: (30.092,144.331,71.902)
C4: (30.881,143.305,72.369)
P: (34.775,148.099,72.335)
C4': (35.388,144.298,73.073)
C2': (34.285,142.590,71.847)
O2': (34.923,141.443,72.357)
N1: (28.348,142.825,72.142)
N2: (28.687,140.688,72.906)
N3: (30.514,142.057,72.729)
N7: (30.854,145.458,71.638)
N9: (32.154,143.820,72.421)
O5': (34.791,146.508,72.333)
O3': (36.508,143.375,71.159)
OP1: (19.779,141.474,66.749)
OP2: (20.783,143.651,65.833)
C3': (24.230,141.292,68.891)
C1': (25.837,141.984,67.337)
C5': (22.685,140.527,66.994)
O6: (29.439,145.521,64.165)
O4': (25.032,141.061,66.649)
C8: (25.816,144.117,65.952)
C2: (29.751,142.269,65.561)
C6: (29.094,144.483,64.732)
C5: (27.829,144.155,65.273)
C4: (27.676,142.948,65.919)
P: (20.881,142.186,66.067)
C4': (24.067,140.501,67.593)
C2': (24.921,142.563,68.409)
O2': (25.663,143.260,69.392)
N1: (30.013,143.456,64.923)
N2: (30.758,141.392,65.625)
N3: (28.583,141.964,66.095)
N7: (26.642,144.872,65.281)
N9: (26.400,142.962,66.416)
O5': (22.215,141.877,66.872)
O3': (25.090,140.574,69.768)
OP2: (20.783,143.651,65.833)
C3': (24.230,141.292,68.891)
C1': (25.837,141.984,67.337)
C5': (22.685,140.527,66.994)
O6: (29.439,145.521,64.165)
O4': (25.032,141.061,66.649)
C8: (25.816,144.117,65.952)
C2: (29.751,142.269,65.561)
C6: (29.094,144.483,64.732)
C5: (27.829,144.155,65.273)
C4: (27.676,142.948,65.919)
P: (20.881,142.186,66.067)
C4': (24.067,140.501,67.593)
C2': (24.921,142.563,68.409)
O2': (25.663,143.260,69.392)
N1: (30.013,143.456,64.923)
N2: (30.758,141.392,65.625)
N3: (28.583,141.964,66.095)
N7: (26.642,144.872,65.281)
N9: (26.400,142.962,66.416)
O5': (22.215,141.877,66.872)
O3': (25.090,140.574,69.768)
Image (generated by PyMOL):