Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01275:01298
Extra
PDB:
ATOM 1 O3' G A1274 3.988 136.701 57.059 1.00 50.79 O
ATOM 2 P G A1275 4.960 136.760 58.330 1.00 47.62 P
ATOM 3 OP1 G A1275 4.809 135.459 59.026 1.00 46.33 O
ATOM 4 OP2 G A1275 4.708 138.025 59.064 1.00 45.47 O
ATOM 5 O5' G A1275 6.417 136.830 57.705 1.00 47.93 O
ATOM 6 C5' G A1275 6.978 135.713 56.995 1.00 47.63 C
ATOM 7 C4' G A1275 8.483 135.797 57.034 1.00 46.87 C
ATOM 8 O4' G A1275 8.897 137.056 56.431 1.00 46.66 O
ATOM 9 C3' G A1275 9.080 135.805 58.439 1.00 45.69 C
ATOM 10 O3' G A1275 10.394 135.275 58.356 1.00 45.82 O
ATOM 11 C2' G A1275 9.155 137.290 58.755 1.00 44.54 C
ATOM 12 O2' G A1275 10.101 137.583 59.759 1.00 41.56 O
ATOM 13 C1' G A1275 9.573 137.839 57.392 1.00 45.15 C
ATOM 14 N9 G A1275 9.266 139.245 57.153 1.00 44.67 N
ATOM 15 C8 G A1275 8.108 139.923 57.458 1.00 44.36 C
ATOM 16 N7 G A1275 8.167 141.193 57.162 1.00 44.04 N
ATOM 17 C5 G A1275 9.434 141.359 56.616 1.00 44.84 C
ATOM 18 C6 G A1275 10.078 142.517 56.123 1.00 44.71 C
ATOM 19 O6 G A1275 9.655 143.673 56.083 1.00 46.94 O
ATOM 20 N1 G A1275 11.352 142.232 55.653 1.00 43.44 N
ATOM 21 C2 G A1275 11.939 140.997 55.670 1.00 42.38 C
ATOM 22 N2 G A1275 13.175 140.928 55.178 1.00 43.28 N
ATOM 23 N3 G A1275 11.360 139.912 56.135 1.00 41.90 N
ATOM 24 C4 G A1275 10.116 140.163 56.590 1.00 44.22 C
ATOM 25 P A A1276 10.982 134.396 59.556 1.00 44.12 P
ATOM 26 OP1 A A1276 9.933 133.451 60.020 1.00 43.51 O
ATOM 27 OP2 A A1276 11.590 135.344 60.519 1.00 41.93 O
ATOM 28 O5' A A1276 12.106 133.532 58.829 1.00 41.79 O
TER
ATOM 1 O3' U B1297 15.620 144.508 66.252 1.00 45.01 O
ATOM 2 P G B1298 15.535 144.965 64.716 1.00 46.38 P
ATOM 3 OP1 G B1298 16.374 146.187 64.617 1.00 48.53 O
ATOM 4 OP2 G B1298 14.113 145.021 64.315 1.00 46.75 O
ATOM 5 O5' G B1298 16.249 143.789 63.911 1.00 45.30 O
ATOM 6 C5' G B1298 17.672 143.571 64.031 1.00 44.51 C
ATOM 7 C4' G B1298 18.092 142.369 63.221 1.00 41.12 C
ATOM 8 O4' G B1298 17.384 141.206 63.700 1.00 38.78 O
ATOM 9 C3' G B1298 17.768 142.459 61.743 1.00 41.50 C
ATOM 10 O3' G B1298 18.844 143.099 61.066 1.00 44.41 O
ATOM 11 C2' G B1298 17.615 140.997 61.340 1.00 41.46 C
ATOM 12 O2' G B1298 18.839 140.348 61.062 1.00 39.70 O
ATOM 13 C1' G B1298 17.007 140.395 62.608 1.00 40.74 C
ATOM 14 N9 G B1298 15.553 140.299 62.620 1.00 42.03 N
ATOM 15 C8 G B1298 14.665 141.265 63.032 1.00 43.14 C
ATOM 16 N7 G B1298 13.426 140.861 63.009 1.00 43.13 N
ATOM 17 C5 G B1298 13.501 139.557 62.540 1.00 41.99 C
ATOM 18 C6 G B1298 12.485 138.611 62.323 1.00 42.51 C
ATOM 19 O6 G B1298 11.271 138.726 62.522 1.00 44.76 O
ATOM 20 N1 G B1298 12.996 137.419 61.828 1.00 42.65 N
ATOM 21 C2 G B1298 14.317 137.170 61.585 1.00 41.56 C
ATOM 22 N2 G B1298 14.612 135.953 61.117 1.00 40.78 N
ATOM 23 N3 G B1298 15.278 138.045 61.790 1.00 41.53 N
ATOM 24 C4 G B1298 14.803 139.208 62.268 1.00 41.31 C
ATOM 25 P G B1299 18.557 144.308 60.047 1.00 45.67 P
ATOM 26 OP1 G B1299 19.798 145.104 59.899 1.00 46.16 O
ATOM 27 OP2 G B1299 17.309 144.980 60.476 1.00 47.48 O
ATOM 28 O5' G B1299 18.279 143.586 58.661 1.00 45.34 O
TER
ATOM 2 P G A1275 4.960 136.760 58.330 1.00 47.62 P
ATOM 3 OP1 G A1275 4.809 135.459 59.026 1.00 46.33 O
ATOM 4 OP2 G A1275 4.708 138.025 59.064 1.00 45.47 O
ATOM 5 O5' G A1275 6.417 136.830 57.705 1.00 47.93 O
ATOM 6 C5' G A1275 6.978 135.713 56.995 1.00 47.63 C
ATOM 7 C4' G A1275 8.483 135.797 57.034 1.00 46.87 C
ATOM 8 O4' G A1275 8.897 137.056 56.431 1.00 46.66 O
ATOM 9 C3' G A1275 9.080 135.805 58.439 1.00 45.69 C
ATOM 10 O3' G A1275 10.394 135.275 58.356 1.00 45.82 O
ATOM 11 C2' G A1275 9.155 137.290 58.755 1.00 44.54 C
ATOM 12 O2' G A1275 10.101 137.583 59.759 1.00 41.56 O
ATOM 13 C1' G A1275 9.573 137.839 57.392 1.00 45.15 C
ATOM 14 N9 G A1275 9.266 139.245 57.153 1.00 44.67 N
ATOM 15 C8 G A1275 8.108 139.923 57.458 1.00 44.36 C
ATOM 16 N7 G A1275 8.167 141.193 57.162 1.00 44.04 N
ATOM 17 C5 G A1275 9.434 141.359 56.616 1.00 44.84 C
ATOM 18 C6 G A1275 10.078 142.517 56.123 1.00 44.71 C
ATOM 19 O6 G A1275 9.655 143.673 56.083 1.00 46.94 O
ATOM 20 N1 G A1275 11.352 142.232 55.653 1.00 43.44 N
ATOM 21 C2 G A1275 11.939 140.997 55.670 1.00 42.38 C
ATOM 22 N2 G A1275 13.175 140.928 55.178 1.00 43.28 N
ATOM 23 N3 G A1275 11.360 139.912 56.135 1.00 41.90 N
ATOM 24 C4 G A1275 10.116 140.163 56.590 1.00 44.22 C
ATOM 25 P A A1276 10.982 134.396 59.556 1.00 44.12 P
ATOM 26 OP1 A A1276 9.933 133.451 60.020 1.00 43.51 O
ATOM 27 OP2 A A1276 11.590 135.344 60.519 1.00 41.93 O
ATOM 28 O5' A A1276 12.106 133.532 58.829 1.00 41.79 O
TER
ATOM 1 O3' U B1297 15.620 144.508 66.252 1.00 45.01 O
ATOM 2 P G B1298 15.535 144.965 64.716 1.00 46.38 P
ATOM 3 OP1 G B1298 16.374 146.187 64.617 1.00 48.53 O
ATOM 4 OP2 G B1298 14.113 145.021 64.315 1.00 46.75 O
ATOM 5 O5' G B1298 16.249 143.789 63.911 1.00 45.30 O
ATOM 6 C5' G B1298 17.672 143.571 64.031 1.00 44.51 C
ATOM 7 C4' G B1298 18.092 142.369 63.221 1.00 41.12 C
ATOM 8 O4' G B1298 17.384 141.206 63.700 1.00 38.78 O
ATOM 9 C3' G B1298 17.768 142.459 61.743 1.00 41.50 C
ATOM 10 O3' G B1298 18.844 143.099 61.066 1.00 44.41 O
ATOM 11 C2' G B1298 17.615 140.997 61.340 1.00 41.46 C
ATOM 12 O2' G B1298 18.839 140.348 61.062 1.00 39.70 O
ATOM 13 C1' G B1298 17.007 140.395 62.608 1.00 40.74 C
ATOM 14 N9 G B1298 15.553 140.299 62.620 1.00 42.03 N
ATOM 15 C8 G B1298 14.665 141.265 63.032 1.00 43.14 C
ATOM 16 N7 G B1298 13.426 140.861 63.009 1.00 43.13 N
ATOM 17 C5 G B1298 13.501 139.557 62.540 1.00 41.99 C
ATOM 18 C6 G B1298 12.485 138.611 62.323 1.00 42.51 C
ATOM 19 O6 G B1298 11.271 138.726 62.522 1.00 44.76 O
ATOM 20 N1 G B1298 12.996 137.419 61.828 1.00 42.65 N
ATOM 21 C2 G B1298 14.317 137.170 61.585 1.00 41.56 C
ATOM 22 N2 G B1298 14.612 135.953 61.117 1.00 40.78 N
ATOM 23 N3 G B1298 15.278 138.045 61.790 1.00 41.53 N
ATOM 24 C4 G B1298 14.803 139.208 62.268 1.00 41.31 C
ATOM 25 P G B1299 18.557 144.308 60.047 1.00 45.67 P
ATOM 26 OP1 G B1299 19.798 145.104 59.899 1.00 46.16 O
ATOM 27 OP2 G B1299 17.309 144.980 60.476 1.00 47.48 O
ATOM 28 O5' G B1299 18.279 143.586 58.661 1.00 45.34 O
TER
Atoms:
OP1: (4.809,135.459,59.026)
OP2: (4.708,138.025,59.064)
C3': (9.080,135.805,58.439)
C1': (9.573,137.839,57.392)
C5': (6.978,135.713,56.995)
O6: (9.655,143.673,56.083)
O4': (8.897,137.056,56.431)
C8: (8.108,139.923,57.458)
C2: (11.939,140.997,55.670)
C6: (10.078,142.517,56.123)
C5: (9.434,141.359,56.616)
C4: (10.116,140.163,56.590)
P: (4.960,136.760,58.330)
C4': (8.483,135.797,57.034)
C2': (9.155,137.290,58.755)
O2': (10.101,137.583,59.759)
N1: (11.352,142.232,55.653)
N2: (13.175,140.928,55.178)
N3: (11.360,139.912,56.135)
N7: (8.167,141.193,57.162)
N9: (9.266,139.245,57.153)
O5': (6.417,136.830,57.705)
O3': (10.394,135.275,58.356)
OP2: (4.708,138.025,59.064)
C3': (9.080,135.805,58.439)
C1': (9.573,137.839,57.392)
C5': (6.978,135.713,56.995)
O6: (9.655,143.673,56.083)
O4': (8.897,137.056,56.431)
C8: (8.108,139.923,57.458)
C2: (11.939,140.997,55.670)
C6: (10.078,142.517,56.123)
C5: (9.434,141.359,56.616)
C4: (10.116,140.163,56.590)
P: (4.960,136.760,58.330)
C4': (8.483,135.797,57.034)
C2': (9.155,137.290,58.755)
O2': (10.101,137.583,59.759)
N1: (11.352,142.232,55.653)
N2: (13.175,140.928,55.178)
N3: (11.360,139.912,56.135)
N7: (8.167,141.193,57.162)
N9: (9.266,139.245,57.153)
O5': (6.417,136.830,57.705)
O3': (10.394,135.275,58.356)
OP1: (16.374,146.187,64.617)
OP2: (14.113,145.021,64.315)
C3': (17.768,142.459,61.743)
C1': (17.007,140.395,62.608)
C5': (17.672,143.571,64.031)
O6: (11.271,138.726,62.522)
O4': (17.384,141.206,63.700)
C8: (14.665,141.265,63.032)
C2: (14.317,137.170,61.585)
C6: (12.485,138.611,62.323)
C5: (13.501,139.557,62.540)
C4: (14.803,139.208,62.268)
P: (15.535,144.965,64.716)
C4': (18.092,142.369,63.221)
C2': (17.615,140.997,61.340)
O2': (18.839,140.348,61.062)
N1: (12.996,137.419,61.828)
N2: (14.612,135.953,61.117)
N3: (15.278,138.045,61.790)
N7: (13.426,140.861,63.009)
N9: (15.553,140.299,62.620)
O5': (16.249,143.789,63.911)
O3': (18.844,143.099,61.066)
OP2: (14.113,145.021,64.315)
C3': (17.768,142.459,61.743)
C1': (17.007,140.395,62.608)
C5': (17.672,143.571,64.031)
O6: (11.271,138.726,62.522)
O4': (17.384,141.206,63.700)
C8: (14.665,141.265,63.032)
C2: (14.317,137.170,61.585)
C6: (12.485,138.611,62.323)
C5: (13.501,139.557,62.540)
C4: (14.803,139.208,62.268)
P: (15.535,144.965,64.716)
C4': (18.092,142.369,63.221)
C2': (17.615,140.997,61.340)
O2': (18.839,140.348,61.062)
N1: (12.996,137.419,61.828)
N2: (14.612,135.953,61.117)
N3: (15.278,138.045,61.790)
N7: (13.426,140.861,63.009)
N9: (15.553,140.299,62.620)
O5': (16.249,143.789,63.911)
O3': (18.844,143.099,61.066)
Image (generated by PyMOL):