Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:013:0506
Extra
PDB:
ATOM 1 O3' U A 12 34.214 148.251 73.944 1.00 38.08 O
ATOM 2 P G A 13 34.674 147.849 72.466 1.00 38.00 P
ATOM 3 OP1 G A 13 36.092 148.278 72.352 1.00 39.94 O
ATOM 4 OP2 G A 13 33.667 148.376 71.513 1.00 37.99 O
ATOM 5 O5' G A 13 34.630 146.254 72.458 1.00 37.69 O
ATOM 6 C5' G A 13 35.574 145.468 73.231 1.00 36.41 C
ATOM 7 C4' G A 13 35.241 143.997 73.116 1.00 35.59 C
ATOM 8 O4' G A 13 33.935 143.753 73.703 1.00 37.93 O
ATOM 9 C3' G A 13 35.130 143.492 71.689 1.00 34.39 C
ATOM 10 O3' G A 13 36.419 143.107 71.214 1.00 31.92 O
ATOM 11 C2' G A 13 34.151 142.331 71.818 1.00 33.94 C
ATOM 12 O2' G A 13 34.770 141.186 72.342 1.00 32.66 O
ATOM 13 C1' G A 13 33.198 142.852 72.894 1.00 35.65 C
ATOM 14 N9 G A 13 32.003 143.553 72.429 1.00 37.78 N
ATOM 15 C8 G A 13 31.931 144.849 71.979 1.00 38.67 C
ATOM 16 N7 G A 13 30.715 145.228 71.702 1.00 38.93 N
ATOM 17 C5 G A 13 29.936 144.111 71.965 1.00 38.80 C
ATOM 18 C6 G A 13 28.534 143.921 71.854 1.00 38.76 C
ATOM 19 O6 G A 13 27.675 144.731 71.499 1.00 42.07 O
ATOM 20 N1 G A 13 28.161 142.637 72.215 1.00 37.91 N
ATOM 21 C2 G A 13 29.022 141.660 72.636 1.00 39.57 C
ATOM 22 N2 G A 13 28.471 140.484 72.948 1.00 40.55 N
ATOM 23 N3 G A 13 30.330 141.820 72.746 1.00 40.53 N
ATOM 24 C4 G A 13 30.716 143.063 72.398 1.00 38.90 C
ATOM 25 P G A 14 36.818 143.350 69.671 1.00 30.78 P
ATOM 26 OP1 G A 14 38.287 143.191 69.572 1.00 29.09 O
ATOM 27 OP2 G A 14 36.179 144.611 69.201 1.00 30.18 O
ATOM 28 O5' G A 14 36.142 142.136 68.895 1.00 29.30 O
TER
ATOM 1 O3' U B 505 20.852 141.296 64.718 1.00 32.24 O
ATOM 2 P G B 506 20.649 141.948 66.164 1.00 33.76 P
ATOM 3 OP1 G B 506 19.590 141.163 66.844 1.00 31.28 O
ATOM 4 OP2 G B 506 20.494 143.420 66.001 1.00 33.84 O
ATOM 5 O5' G B 506 22.028 141.675 66.901 1.00 34.04 O
ATOM 6 C5' G B 506 22.538 140.343 67.010 1.00 34.00 C
ATOM 7 C4' G B 506 23.920 140.360 67.603 1.00 33.55 C
ATOM 8 O4' G B 506 24.842 140.970 66.653 1.00 32.89 O
ATOM 9 C3' G B 506 24.071 141.154 68.904 1.00 33.02 C
ATOM 10 O3' G B 506 24.957 140.445 69.760 1.00 35.11 O
ATOM 11 C2' G B 506 24.763 142.429 68.430 1.00 32.08 C
ATOM 12 O2' G B 506 25.522 143.078 69.427 1.00 30.58 O
ATOM 13 C1' G B 506 25.676 141.852 67.357 1.00 32.31 C
ATOM 14 N9 G B 506 26.283 142.811 66.442 1.00 33.02 N
ATOM 15 C8 G B 506 25.737 143.973 65.951 1.00 34.32 C
ATOM 16 N7 G B 506 26.582 144.675 65.246 1.00 34.29 N
ATOM 17 C5 G B 506 27.747 143.919 65.255 1.00 35.21 C
ATOM 18 C6 G B 506 29.017 144.178 64.684 1.00 36.18 C
ATOM 19 O6 G B 506 29.390 145.175 64.055 1.00 39.09 O
ATOM 20 N1 G B 506 29.905 143.134 64.919 1.00 34.69 N
ATOM 21 C2 G B 506 29.616 141.998 65.619 1.00 34.44 C
ATOM 22 N2 G B 506 30.602 141.106 65.730 1.00 33.72 N
ATOM 23 N3 G B 506 28.445 141.751 66.172 1.00 35.38 N
ATOM 24 C4 G B 506 27.564 142.749 65.956 1.00 34.56 C
ATOM 25 P A B 507 24.714 140.443 71.347 1.00 37.37 P
ATOM 26 OP1 A B 507 23.271 140.675 71.629 1.00 36.65 O
ATOM 27 OP2 A B 507 25.736 141.333 71.964 1.00 35.89 O
ATOM 28 O5' A B 507 25.053 138.943 71.752 1.00 36.87 O
TER
ATOM 2 P G A 13 34.674 147.849 72.466 1.00 38.00 P
ATOM 3 OP1 G A 13 36.092 148.278 72.352 1.00 39.94 O
ATOM 4 OP2 G A 13 33.667 148.376 71.513 1.00 37.99 O
ATOM 5 O5' G A 13 34.630 146.254 72.458 1.00 37.69 O
ATOM 6 C5' G A 13 35.574 145.468 73.231 1.00 36.41 C
ATOM 7 C4' G A 13 35.241 143.997 73.116 1.00 35.59 C
ATOM 8 O4' G A 13 33.935 143.753 73.703 1.00 37.93 O
ATOM 9 C3' G A 13 35.130 143.492 71.689 1.00 34.39 C
ATOM 10 O3' G A 13 36.419 143.107 71.214 1.00 31.92 O
ATOM 11 C2' G A 13 34.151 142.331 71.818 1.00 33.94 C
ATOM 12 O2' G A 13 34.770 141.186 72.342 1.00 32.66 O
ATOM 13 C1' G A 13 33.198 142.852 72.894 1.00 35.65 C
ATOM 14 N9 G A 13 32.003 143.553 72.429 1.00 37.78 N
ATOM 15 C8 G A 13 31.931 144.849 71.979 1.00 38.67 C
ATOM 16 N7 G A 13 30.715 145.228 71.702 1.00 38.93 N
ATOM 17 C5 G A 13 29.936 144.111 71.965 1.00 38.80 C
ATOM 18 C6 G A 13 28.534 143.921 71.854 1.00 38.76 C
ATOM 19 O6 G A 13 27.675 144.731 71.499 1.00 42.07 O
ATOM 20 N1 G A 13 28.161 142.637 72.215 1.00 37.91 N
ATOM 21 C2 G A 13 29.022 141.660 72.636 1.00 39.57 C
ATOM 22 N2 G A 13 28.471 140.484 72.948 1.00 40.55 N
ATOM 23 N3 G A 13 30.330 141.820 72.746 1.00 40.53 N
ATOM 24 C4 G A 13 30.716 143.063 72.398 1.00 38.90 C
ATOM 25 P G A 14 36.818 143.350 69.671 1.00 30.78 P
ATOM 26 OP1 G A 14 38.287 143.191 69.572 1.00 29.09 O
ATOM 27 OP2 G A 14 36.179 144.611 69.201 1.00 30.18 O
ATOM 28 O5' G A 14 36.142 142.136 68.895 1.00 29.30 O
TER
ATOM 1 O3' U B 505 20.852 141.296 64.718 1.00 32.24 O
ATOM 2 P G B 506 20.649 141.948 66.164 1.00 33.76 P
ATOM 3 OP1 G B 506 19.590 141.163 66.844 1.00 31.28 O
ATOM 4 OP2 G B 506 20.494 143.420 66.001 1.00 33.84 O
ATOM 5 O5' G B 506 22.028 141.675 66.901 1.00 34.04 O
ATOM 6 C5' G B 506 22.538 140.343 67.010 1.00 34.00 C
ATOM 7 C4' G B 506 23.920 140.360 67.603 1.00 33.55 C
ATOM 8 O4' G B 506 24.842 140.970 66.653 1.00 32.89 O
ATOM 9 C3' G B 506 24.071 141.154 68.904 1.00 33.02 C
ATOM 10 O3' G B 506 24.957 140.445 69.760 1.00 35.11 O
ATOM 11 C2' G B 506 24.763 142.429 68.430 1.00 32.08 C
ATOM 12 O2' G B 506 25.522 143.078 69.427 1.00 30.58 O
ATOM 13 C1' G B 506 25.676 141.852 67.357 1.00 32.31 C
ATOM 14 N9 G B 506 26.283 142.811 66.442 1.00 33.02 N
ATOM 15 C8 G B 506 25.737 143.973 65.951 1.00 34.32 C
ATOM 16 N7 G B 506 26.582 144.675 65.246 1.00 34.29 N
ATOM 17 C5 G B 506 27.747 143.919 65.255 1.00 35.21 C
ATOM 18 C6 G B 506 29.017 144.178 64.684 1.00 36.18 C
ATOM 19 O6 G B 506 29.390 145.175 64.055 1.00 39.09 O
ATOM 20 N1 G B 506 29.905 143.134 64.919 1.00 34.69 N
ATOM 21 C2 G B 506 29.616 141.998 65.619 1.00 34.44 C
ATOM 22 N2 G B 506 30.602 141.106 65.730 1.00 33.72 N
ATOM 23 N3 G B 506 28.445 141.751 66.172 1.00 35.38 N
ATOM 24 C4 G B 506 27.564 142.749 65.956 1.00 34.56 C
ATOM 25 P A B 507 24.714 140.443 71.347 1.00 37.37 P
ATOM 26 OP1 A B 507 23.271 140.675 71.629 1.00 36.65 O
ATOM 27 OP2 A B 507 25.736 141.333 71.964 1.00 35.89 O
ATOM 28 O5' A B 507 25.053 138.943 71.752 1.00 36.87 O
TER
Atoms:
OP1: (36.092,148.278,72.352)
OP2: (33.667,148.376,71.513)
C3': (35.130,143.492,71.689)
C1': (33.198,142.852,72.894)
C5': (35.574,145.468,73.231)
O6: (27.675,144.731,71.499)
O4': (33.935,143.753,73.703)
C8: (31.931,144.849,71.979)
C2: (29.022,141.660,72.636)
C6: (28.534,143.921,71.854)
C5: (29.936,144.111,71.965)
C4: (30.716,143.063,72.398)
P: (34.674,147.849,72.466)
C4': (35.241,143.997,73.116)
C2': (34.151,142.331,71.818)
O2': (34.770,141.186,72.342)
N1: (28.161,142.637,72.215)
N2: (28.471,140.484,72.948)
N3: (30.330,141.820,72.746)
N7: (30.715,145.228,71.702)
N9: (32.003,143.553,72.429)
O5': (34.630,146.254,72.458)
O3': (36.419,143.107,71.214)
OP2: (33.667,148.376,71.513)
C3': (35.130,143.492,71.689)
C1': (33.198,142.852,72.894)
C5': (35.574,145.468,73.231)
O6: (27.675,144.731,71.499)
O4': (33.935,143.753,73.703)
C8: (31.931,144.849,71.979)
C2: (29.022,141.660,72.636)
C6: (28.534,143.921,71.854)
C5: (29.936,144.111,71.965)
C4: (30.716,143.063,72.398)
P: (34.674,147.849,72.466)
C4': (35.241,143.997,73.116)
C2': (34.151,142.331,71.818)
O2': (34.770,141.186,72.342)
N1: (28.161,142.637,72.215)
N2: (28.471,140.484,72.948)
N3: (30.330,141.820,72.746)
N7: (30.715,145.228,71.702)
N9: (32.003,143.553,72.429)
O5': (34.630,146.254,72.458)
O3': (36.419,143.107,71.214)
OP1: (19.590,141.163,66.844)
OP2: (20.494,143.420,66.001)
C3': (24.071,141.154,68.904)
C1': (25.676,141.852,67.357)
C5': (22.538,140.343,67.010)
O6: (29.390,145.175,64.055)
O4': (24.842,140.970,66.653)
C8: (25.737,143.973,65.951)
C2: (29.616,141.998,65.619)
C6: (29.017,144.178,64.684)
C5: (27.747,143.919,65.255)
C4: (27.564,142.749,65.956)
P: (20.649,141.948,66.164)
C4': (23.920,140.360,67.603)
C2': (24.763,142.429,68.430)
O2': (25.522,143.078,69.427)
N1: (29.905,143.134,64.919)
N2: (30.602,141.106,65.730)
N3: (28.445,141.751,66.172)
N7: (26.582,144.675,65.246)
N9: (26.283,142.811,66.442)
O5': (22.028,141.675,66.901)
O3': (24.957,140.445,69.760)
OP2: (20.494,143.420,66.001)
C3': (24.071,141.154,68.904)
C1': (25.676,141.852,67.357)
C5': (22.538,140.343,67.010)
O6: (29.390,145.175,64.055)
O4': (24.842,140.970,66.653)
C8: (25.737,143.973,65.951)
C2: (29.616,141.998,65.619)
C6: (29.017,144.178,64.684)
C5: (27.747,143.919,65.255)
C4: (27.564,142.749,65.956)
P: (20.649,141.948,66.164)
C4': (23.920,140.360,67.603)
C2': (24.763,142.429,68.430)
O2': (25.522,143.078,69.427)
N1: (29.905,143.134,64.919)
N2: (30.602,141.106,65.730)
N3: (28.445,141.751,66.172)
N7: (26.582,144.675,65.246)
N9: (26.283,142.811,66.442)
O5': (22.028,141.675,66.901)
O3': (24.957,140.445,69.760)
Image (generated by PyMOL):