Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12719:12716
Extra
PDB:
ATOM 1 O3' G A2718 8.288 -11.754 87.389 1.00 38.68 O
ATOM 2 P A A2719 8.338 -10.305 86.720 1.00 37.54 P
ATOM 3 OP1 A A2719 7.884 -9.348 87.733 1.00 37.73 O
ATOM 4 OP2 A A2719 7.619 -10.360 85.443 1.00 37.51 O
ATOM 5 O5' A A2719 9.902 -10.134 86.457 1.00 37.30 O
ATOM 6 C5' A A2719 10.813 -10.076 87.549 1.00 37.30 C
ATOM 7 C4' A A2719 12.198 -10.382 87.126 1.00 37.08 C
ATOM 8 O4' A A2719 12.288 -11.723 86.625 1.00 37.01 O
ATOM 9 C3' A A2719 12.712 -9.533 86.016 1.00 36.90 C
ATOM 10 O3' A A2719 13.169 -8.302 86.500 1.00 36.92 O
ATOM 11 C2' A A2719 13.800 -10.399 85.379 1.00 36.70 C
ATOM 12 O2' A A2719 15.043 -10.239 86.020 1.00 36.62 O
ATOM 13 C1' A A2719 13.291 -11.804 85.647 1.00 36.78 C
ATOM 14 N9 A A2719 12.690 -12.390 84.456 1.00 36.73 N
ATOM 15 C8 A A2719 11.538 -11.867 83.981 1.00 36.83 C
ATOM 16 N7 A A2719 11.125 -12.537 82.955 1.00 36.79 N
ATOM 17 C5 A A2719 12.061 -13.565 82.739 1.00 36.67 C
ATOM 18 C6 A A2719 12.141 -14.605 81.776 1.00 36.60 C
ATOM 19 N6 A A2719 11.245 -14.818 80.796 1.00 36.64 N
ATOM 20 N1 A A2719 13.195 -15.430 81.860 1.00 36.49 N
ATOM 21 C2 A A2719 14.066 -15.239 82.847 1.00 36.47 C
ATOM 22 N3 A A2719 14.074 -14.299 83.785 1.00 36.53 N
ATOM 23 C4 A A2719 13.037 -13.475 83.679 1.00 36.63 C
ATOM 24 P G A2720 13.180 -7.059 85.578 1.00 38.92 P
ATOM 25 OP1 G A2720 14.083 -6.112 86.171 1.00 38.91 O
ATOM 26 OP2 G A2720 11.784 -6.671 85.379 1.00 39.08 O
ATOM 27 O5' G A2720 13.798 -7.653 84.261 1.00 38.70 O
TER
ATOM 1 O3' C B2715 1.862 -15.739 75.698 1.00 41.36 O
ATOM 2 P G B2716 1.449 -16.461 77.053 1.00 49.07 P
ATOM 3 OP1 G B2716 1.192 -17.863 76.732 1.00 49.15 O
ATOM 4 OP2 G B2716 0.374 -15.641 77.680 1.00 49.27 O
ATOM 5 O5' G B2716 2.743 -16.355 77.924 1.00 48.88 O
ATOM 6 C5' G B2716 3.846 -17.183 77.672 1.00 48.71 C
ATOM 7 C4' G B2716 4.992 -16.808 78.538 1.00 48.55 C
ATOM 8 O4' G B2716 5.315 -15.406 78.370 1.00 48.45 O
ATOM 9 C3' G B2716 4.762 -16.913 80.011 1.00 48.68 C
ATOM 10 O3' G B2716 4.684 -18.251 80.461 1.00 48.77 O
ATOM 11 C2' G B2716 5.947 -16.104 80.544 1.00 48.50 C
ATOM 12 O2' G B2716 7.181 -16.817 80.406 1.00 48.33 O
ATOM 13 C1' G B2716 5.966 -14.945 79.541 1.00 48.41 C
ATOM 14 N9 G B2716 5.242 -13.804 80.068 1.00 48.53 N
ATOM 15 C8 G B2716 3.965 -13.500 79.784 1.00 48.72 C
ATOM 16 N7 G B2716 3.550 -12.484 80.469 1.00 48.82 N
ATOM 17 C5 G B2716 4.618 -12.140 81.257 1.00 48.70 C
ATOM 18 C6 G B2716 4.711 -11.121 82.206 1.00 48.75 C
ATOM 19 O6 G B2716 3.852 -10.308 82.516 1.00 48.92 O
ATOM 20 N1 G B2716 5.966 -11.084 82.804 1.00 48.60 N
ATOM 21 C2 G B2716 7.014 -11.938 82.503 1.00 48.42 C
ATOM 22 N2 G B2716 8.188 -11.732 83.176 1.00 48.30 N
ATOM 23 N3 G B2716 6.883 -12.919 81.584 1.00 48.37 N
ATOM 24 C4 G B2716 5.666 -12.957 81.025 1.00 48.52 C
ATOM 25 P U B2717 3.430 -18.733 81.355 1.00 43.36 P
ATOM 26 OP1 U B2717 3.653 -20.176 81.697 1.00 43.42 O
ATOM 27 OP2 U B2717 2.177 -18.344 80.635 1.00 43.51 O
ATOM 28 O5' U B2717 3.605 -17.836 82.654 1.00 43.39 O
TER
ATOM 2 P A A2719 8.338 -10.305 86.720 1.00 37.54 P
ATOM 3 OP1 A A2719 7.884 -9.348 87.733 1.00 37.73 O
ATOM 4 OP2 A A2719 7.619 -10.360 85.443 1.00 37.51 O
ATOM 5 O5' A A2719 9.902 -10.134 86.457 1.00 37.30 O
ATOM 6 C5' A A2719 10.813 -10.076 87.549 1.00 37.30 C
ATOM 7 C4' A A2719 12.198 -10.382 87.126 1.00 37.08 C
ATOM 8 O4' A A2719 12.288 -11.723 86.625 1.00 37.01 O
ATOM 9 C3' A A2719 12.712 -9.533 86.016 1.00 36.90 C
ATOM 10 O3' A A2719 13.169 -8.302 86.500 1.00 36.92 O
ATOM 11 C2' A A2719 13.800 -10.399 85.379 1.00 36.70 C
ATOM 12 O2' A A2719 15.043 -10.239 86.020 1.00 36.62 O
ATOM 13 C1' A A2719 13.291 -11.804 85.647 1.00 36.78 C
ATOM 14 N9 A A2719 12.690 -12.390 84.456 1.00 36.73 N
ATOM 15 C8 A A2719 11.538 -11.867 83.981 1.00 36.83 C
ATOM 16 N7 A A2719 11.125 -12.537 82.955 1.00 36.79 N
ATOM 17 C5 A A2719 12.061 -13.565 82.739 1.00 36.67 C
ATOM 18 C6 A A2719 12.141 -14.605 81.776 1.00 36.60 C
ATOM 19 N6 A A2719 11.245 -14.818 80.796 1.00 36.64 N
ATOM 20 N1 A A2719 13.195 -15.430 81.860 1.00 36.49 N
ATOM 21 C2 A A2719 14.066 -15.239 82.847 1.00 36.47 C
ATOM 22 N3 A A2719 14.074 -14.299 83.785 1.00 36.53 N
ATOM 23 C4 A A2719 13.037 -13.475 83.679 1.00 36.63 C
ATOM 24 P G A2720 13.180 -7.059 85.578 1.00 38.92 P
ATOM 25 OP1 G A2720 14.083 -6.112 86.171 1.00 38.91 O
ATOM 26 OP2 G A2720 11.784 -6.671 85.379 1.00 39.08 O
ATOM 27 O5' G A2720 13.798 -7.653 84.261 1.00 38.70 O
TER
ATOM 1 O3' C B2715 1.862 -15.739 75.698 1.00 41.36 O
ATOM 2 P G B2716 1.449 -16.461 77.053 1.00 49.07 P
ATOM 3 OP1 G B2716 1.192 -17.863 76.732 1.00 49.15 O
ATOM 4 OP2 G B2716 0.374 -15.641 77.680 1.00 49.27 O
ATOM 5 O5' G B2716 2.743 -16.355 77.924 1.00 48.88 O
ATOM 6 C5' G B2716 3.846 -17.183 77.672 1.00 48.71 C
ATOM 7 C4' G B2716 4.992 -16.808 78.538 1.00 48.55 C
ATOM 8 O4' G B2716 5.315 -15.406 78.370 1.00 48.45 O
ATOM 9 C3' G B2716 4.762 -16.913 80.011 1.00 48.68 C
ATOM 10 O3' G B2716 4.684 -18.251 80.461 1.00 48.77 O
ATOM 11 C2' G B2716 5.947 -16.104 80.544 1.00 48.50 C
ATOM 12 O2' G B2716 7.181 -16.817 80.406 1.00 48.33 O
ATOM 13 C1' G B2716 5.966 -14.945 79.541 1.00 48.41 C
ATOM 14 N9 G B2716 5.242 -13.804 80.068 1.00 48.53 N
ATOM 15 C8 G B2716 3.965 -13.500 79.784 1.00 48.72 C
ATOM 16 N7 G B2716 3.550 -12.484 80.469 1.00 48.82 N
ATOM 17 C5 G B2716 4.618 -12.140 81.257 1.00 48.70 C
ATOM 18 C6 G B2716 4.711 -11.121 82.206 1.00 48.75 C
ATOM 19 O6 G B2716 3.852 -10.308 82.516 1.00 48.92 O
ATOM 20 N1 G B2716 5.966 -11.084 82.804 1.00 48.60 N
ATOM 21 C2 G B2716 7.014 -11.938 82.503 1.00 48.42 C
ATOM 22 N2 G B2716 8.188 -11.732 83.176 1.00 48.30 N
ATOM 23 N3 G B2716 6.883 -12.919 81.584 1.00 48.37 N
ATOM 24 C4 G B2716 5.666 -12.957 81.025 1.00 48.52 C
ATOM 25 P U B2717 3.430 -18.733 81.355 1.00 43.36 P
ATOM 26 OP1 U B2717 3.653 -20.176 81.697 1.00 43.42 O
ATOM 27 OP2 U B2717 2.177 -18.344 80.635 1.00 43.51 O
ATOM 28 O5' U B2717 3.605 -17.836 82.654 1.00 43.39 O
TER
Atoms:
OP1: (7.884,-9.348,87.733)
OP2: (7.619,-10.360,85.443)
C3': (12.712,-9.533,86.016)
C1': (13.291,-11.804,85.647)
C5': (10.813,-10.076,87.549)
O4': (12.288,-11.723,86.625)
C8: (11.538,-11.867,83.981)
O2': (15.043,-10.239,86.020)
C6: (12.141,-14.605,81.776)
C5: (12.061,-13.565,82.739)
C4: (13.037,-13.475,83.679)
P: (8.338,-10.305,86.720)
C4': (12.198,-10.382,87.126)
C2': (13.800,-10.399,85.379)
C2: (14.066,-15.239,82.847)
N1: (13.195,-15.430,81.860)
N3: (14.074,-14.299,83.785)
N6: (11.245,-14.818,80.796)
N7: (11.125,-12.537,82.955)
N9: (12.690,-12.390,84.456)
O5': (9.902,-10.134,86.457)
O3': (13.169,-8.302,86.500)
OP2: (7.619,-10.360,85.443)
C3': (12.712,-9.533,86.016)
C1': (13.291,-11.804,85.647)
C5': (10.813,-10.076,87.549)
O4': (12.288,-11.723,86.625)
C8: (11.538,-11.867,83.981)
O2': (15.043,-10.239,86.020)
C6: (12.141,-14.605,81.776)
C5: (12.061,-13.565,82.739)
C4: (13.037,-13.475,83.679)
P: (8.338,-10.305,86.720)
C4': (12.198,-10.382,87.126)
C2': (13.800,-10.399,85.379)
C2: (14.066,-15.239,82.847)
N1: (13.195,-15.430,81.860)
N3: (14.074,-14.299,83.785)
N6: (11.245,-14.818,80.796)
N7: (11.125,-12.537,82.955)
N9: (12.690,-12.390,84.456)
O5': (9.902,-10.134,86.457)
O3': (13.169,-8.302,86.500)
OP1: (1.192,-17.863,76.732)
OP2: (0.374,-15.641,77.680)
C3': (4.762,-16.913,80.011)
C1': (5.966,-14.945,79.541)
C5': (3.846,-17.183,77.672)
O6: (3.852,-10.308,82.516)
O4': (5.315,-15.406,78.370)
C8: (3.965,-13.500,79.784)
C2: (7.014,-11.938,82.503)
C6: (4.711,-11.121,82.206)
C5: (4.618,-12.140,81.257)
C4: (5.666,-12.957,81.025)
P: (1.449,-16.461,77.053)
C4': (4.992,-16.808,78.538)
C2': (5.947,-16.104,80.544)
O2': (7.181,-16.817,80.406)
N1: (5.966,-11.084,82.804)
N2: (8.188,-11.732,83.176)
N3: (6.883,-12.919,81.584)
N7: (3.550,-12.484,80.469)
N9: (5.242,-13.804,80.068)
O5': (2.743,-16.355,77.924)
O3': (4.684,-18.251,80.461)
OP2: (0.374,-15.641,77.680)
C3': (4.762,-16.913,80.011)
C1': (5.966,-14.945,79.541)
C5': (3.846,-17.183,77.672)
O6: (3.852,-10.308,82.516)
O4': (5.315,-15.406,78.370)
C8: (3.965,-13.500,79.784)
C2: (7.014,-11.938,82.503)
C6: (4.711,-11.121,82.206)
C5: (4.618,-12.140,81.257)
C4: (5.666,-12.957,81.025)
P: (1.449,-16.461,77.053)
C4': (4.992,-16.808,78.538)
C2': (5.947,-16.104,80.544)
O2': (7.181,-16.817,80.406)
N1: (5.966,-11.084,82.804)
N2: (8.188,-11.732,83.176)
N3: (6.883,-12.919,81.584)
N7: (3.550,-12.484,80.469)
N9: (5.242,-13.804,80.068)
O5': (2.743,-16.355,77.924)
O3': (4.684,-18.251,80.461)
Image (generated by PyMOL):