ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNI:A769:A770

Extra

PDB:
ATOM 1 O3' G A 768 46.317 -26.784 -3.411 1.00 45.92 O
ATOM 2 P A A 769 45.110 -26.210 -2.531 1.00 42.50 P
ATOM 3 OP1 A A 769 45.082 -24.735 -2.655 1.00 42.42 O
ATOM 4 OP2 A A 769 45.231 -26.835 -1.179 1.00 47.44 O
ATOM 5 O5' A A 769 43.799 -26.787 -3.228 1.00 40.08 O
ATOM 6 C5' A A 769 43.597 -26.693 -4.631 1.00 44.75 C
ATOM 7 C4' A A 769 42.576 -27.724 -5.069 1.00 47.84 C
ATOM 8 O4' A A 769 43.061 -29.009 -4.620 1.00 50.65 O
ATOM 9 C3' A A 769 41.174 -27.601 -4.473 1.00 44.21 C
ATOM 10 O3' A A 769 40.310 -26.755 -5.245 1.00 48.01 O
ATOM 11 C2' A A 769 40.693 -29.039 -4.461 1.00 46.55 C
ATOM 12 O2' A A 769 40.196 -29.417 -5.717 1.00 50.04 O
ATOM 13 C1' A A 769 41.990 -29.797 -4.164 1.00 46.96 C
ATOM 14 N9 A A 769 42.177 -29.995 -2.732 1.00 51.09 N
ATOM 15 C8 A A 769 42.695 -29.098 -1.822 1.00 55.42 C
ATOM 16 N7 A A 769 42.645 -29.513 -0.584 1.00 52.70 N
ATOM 17 C5 A A 769 42.084 -30.776 -0.680 1.00 53.30 C
ATOM 18 C6 A A 769 41.752 -31.726 0.281 1.00 50.91 C
ATOM 19 N6 A A 769 41.938 -31.530 1.594 1.00 50.04 N
ATOM 20 N1 A A 769 41.214 -32.893 -0.141 1.00 49.03 N
ATOM 21 C2 A A 769 41.022 -33.068 -1.456 1.00 45.89 C
ATOM 22 N3 A A 769 41.287 -32.245 -2.461 1.00 52.73 N
ATOM 23 C4 A A 769 41.820 -31.100 -2.001 1.00 52.83 C
ATOM 24 P U A 770 39.524 -25.539 -4.521 1.00 59.79 P
ATOM 25 OP1 U A 770 40.341 -25.026 -3.379 1.00 51.01 O
ATOM 26 OP2 U A 770 38.118 -25.966 -4.284 1.00 54.40 O
ATOM 27 O5' U A 770 39.468 -24.385 -5.616 1.00 53.82 O
TER

ATOM 1 O3' A B 769 40.310 -26.755 -5.245 1.00 48.01 O
ATOM 2 P U B 770 39.524 -25.539 -4.521 1.00 59.79 P
ATOM 3 OP1 U B 770 40.341 -25.026 -3.379 1.00 51.01 O
ATOM 4 OP2 U B 770 38.118 -25.966 -4.284 1.00 54.40 O
ATOM 5 O5' U B 770 39.468 -24.385 -5.616 1.00 53.82 O
ATOM 6 C5' U B 770 40.655 -23.884 -6.213 1.00 55.17 C
ATOM 7 C4' U B 770 40.316 -22.874 -7.269 1.00 58.00 C
ATOM 8 O4' U B 770 39.412 -23.513 -8.201 1.00 55.67 O
ATOM 9 C3' U B 770 39.670 -21.563 -6.789 1.00 56.02 C
ATOM 10 O3' U B 770 40.424 -20.407 -7.159 1.00 51.90 O
ATOM 11 C2' U B 770 38.297 -21.520 -7.467 1.00 57.24 C
ATOM 12 O2' U B 770 38.117 -20.273 -8.129 1.00 71.35 O
ATOM 13 C1' U B 770 38.370 -22.630 -8.526 1.00 57.48 C
ATOM 14 N1 U B 770 37.115 -23.400 -8.619 1.00 56.90 N
ATOM 15 C2 U B 770 36.443 -23.374 -9.828 1.00 57.94 C
ATOM 16 O2 U B 770 36.863 -22.784 -10.813 1.00 56.92 O
ATOM 17 N3 U B 770 35.254 -24.063 -9.849 1.00 55.66 N
ATOM 18 C4 U B 770 34.669 -24.753 -8.813 1.00 54.63 C
ATOM 19 O4 U B 770 33.513 -25.168 -8.945 1.00 59.59 O
ATOM 20 C5 U B 770 35.435 -24.761 -7.601 1.00 55.09 C
ATOM 21 C6 U B 770 36.605 -24.103 -7.546 1.00 58.48 C
ATOM 22 P G B 771 41.963 -20.271 -6.723 1.00 51.62 P
ATOM 23 OP1 G B 771 42.186 -20.667 -5.307 1.00 47.99 O
ATOM 24 OP2 G B 771 42.398 -18.923 -7.176 1.00 43.13 O
ATOM 25 O5' G B 771 42.661 -21.349 -7.662 1.00 54.26 O
TER

Atoms:
OP1: (45.082,-24.735,-2.655)
OP2: (45.231,-26.835,-1.179)
C3': (41.174,-27.601,-4.473)
C1': (41.990,-29.797,-4.164)
C5': (43.597,-26.693,-4.631)
O4': (43.061,-29.009,-4.620)
C8: (42.695,-29.098,-1.822)
O2': (40.196,-29.417,-5.717)
C6: (41.752,-31.726,0.281)
C5: (42.084,-30.776,-0.680)
C4: (41.820,-31.100,-2.001)
P: (45.110,-26.210,-2.531)
C4': (42.576,-27.724,-5.069)
C2': (40.693,-29.039,-4.461)
C2: (41.022,-33.068,-1.456)
N1: (41.214,-32.893,-0.141)
N3: (41.287,-32.245,-2.461)
N6: (41.938,-31.530,1.594)
N7: (42.645,-29.513,-0.584)
N9: (42.177,-29.995,-2.732)
O5': (43.799,-26.787,-3.228)
O3': (40.310,-26.755,-5.245)
C4: (34.669,-24.753,-8.813)
N3: (35.254,-24.063,-9.849)
OP1: (40.341,-25.026,-3.379)
OP2: (38.118,-25.966,-4.284)
C2: (36.443,-23.374,-9.828)
C1': (38.370,-22.630,-8.526)
C3': (39.670,-21.563,-6.789)
O5': (39.468,-24.385,-5.616)
O4': (39.412,-23.513,-8.201)
C5': (40.655,-23.884,-6.213)
P: (39.524,-25.539,-4.521)
C4': (40.316,-22.874,-7.269)
C2': (38.297,-21.520,-7.467)
O2': (38.117,-20.273,-8.129)
N1: (37.115,-23.400,-8.619)
O4: (33.513,-25.168,-8.945)
O2: (36.863,-22.784,-10.813)
C6: (36.605,-24.103,-7.546)
C5: (35.435,-24.761,-7.601)
O3': (40.424,-20.407,-7.159)
Image (generated by PyMOL):
PyMOL image
show in jmol