ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A520:A521

Extra

PDB:
ATOM 1 O3' G A 519 21.020 139.469 107.575 1.00 48.44 O
ATOM 2 P A A 520 20.830 140.600 108.710 1.00 47.01 P
ATOM 3 OP1 A A 520 20.637 139.940 110.024 1.00 45.63 O
ATOM 4 OP2 A A 520 19.794 141.550 108.216 1.00 48.16 O
ATOM 5 O5' A A 520 22.259 141.304 108.753 1.00 45.27 O
ATOM 6 C5' A A 520 23.457 140.503 108.770 1.00 43.68 C
ATOM 7 C4' A A 520 24.649 141.325 109.195 1.00 43.39 C
ATOM 8 O4' A A 520 24.869 142.389 108.246 1.00 42.25 O
ATOM 9 C3' A A 520 24.550 142.016 110.543 1.00 42.60 C
ATOM 10 O3' A A 520 24.952 141.106 111.554 1.00 42.36 O
ATOM 11 C2' A A 520 25.547 143.153 110.403 1.00 41.56 C
ATOM 12 O2' A A 520 26.856 142.697 110.646 1.00 41.55 O
ATOM 13 C1' A A 520 25.394 143.510 108.918 1.00 41.87 C
ATOM 14 N9 A A 520 24.562 144.671 108.591 1.00 42.45 N
ATOM 15 C8 A A 520 23.231 144.736 108.244 1.00 42.60 C
ATOM 16 N7 A A 520 22.819 145.946 107.959 1.00 43.53 N
ATOM 17 C5 A A 520 23.950 146.732 108.130 1.00 43.22 C
ATOM 18 C6 A A 520 24.191 148.110 107.951 1.00 44.08 C
ATOM 19 N6 A A 520 23.284 148.982 107.501 1.00 42.17 N
ATOM 20 N1 A A 520 25.427 148.566 108.238 1.00 44.79 N
ATOM 21 C2 A A 520 26.356 147.695 108.650 1.00 44.05 C
ATOM 22 N3 A A 520 26.261 146.386 108.826 1.00 43.15 N
ATOM 23 C4 A A 520 25.020 145.962 108.545 1.00 43.36 C
ATOM 24 P U A 521 23.895 140.636 112.645 1.00 42.80 P
ATOM 25 OP1 U A 521 22.640 140.332 111.926 1.00 42.72 O
ATOM 26 OP2 U A 521 23.897 141.646 113.706 1.00 43.19 O
ATOM 27 O5' U A 521 24.493 139.279 113.208 1.00 39.93 O
TER

ATOM 1 O3' A B 520 24.952 141.106 111.554 1.00 42.36 O
ATOM 2 P U B 521 23.895 140.636 112.645 1.00 42.80 P
ATOM 3 OP1 U B 521 22.640 140.332 111.926 1.00 42.72 O
ATOM 4 OP2 U B 521 23.897 141.646 113.706 1.00 43.19 O
ATOM 5 O5' U B 521 24.493 139.279 113.208 1.00 39.93 O
ATOM 6 C5' U B 521 24.771 138.193 112.329 1.00 39.51 C
ATOM 7 C4' U B 521 24.395 136.898 112.976 1.00 38.74 C
ATOM 8 O4' U B 521 25.299 136.626 114.064 1.00 39.85 O
ATOM 9 C3' U B 521 22.995 136.851 113.568 1.00 38.26 C
ATOM 10 O3' U B 521 22.512 135.533 113.464 1.00 36.83 O
ATOM 11 C2' U B 521 23.226 137.127 115.036 1.00 39.22 C
ATOM 12 O2' U B 521 22.227 136.497 115.804 1.00 38.38 O
ATOM 13 C1' U B 521 24.557 136.424 115.247 1.00 39.40 C
ATOM 14 N1 U B 521 25.317 137.013 116.340 1.00 38.96 N
ATOM 15 C2 U B 521 25.243 136.425 117.581 1.00 38.62 C
ATOM 16 O2 U B 521 24.511 135.479 117.844 1.00 39.58 O
ATOM 17 N3 U B 521 26.056 136.996 118.515 1.00 39.01 N
ATOM 18 C4 U B 521 26.892 138.076 118.330 1.00 40.53 C
ATOM 19 O4 U B 521 27.621 138.440 119.245 1.00 41.58 O
ATOM 20 C5 U B 521 26.861 138.645 117.027 1.00 40.66 C
ATOM 21 C6 U B 521 26.096 138.108 116.104 1.00 40.25 C
ATOM 22 P C B 522 21.820 135.083 112.114 1.00 36.31 P
ATOM 23 OP1 C B 522 21.314 136.351 111.573 1.00 37.27 O
ATOM 24 OP2 C B 522 20.900 133.941 112.301 1.00 34.77 O
ATOM 25 O5' C B 522 23.042 134.640 111.204 1.00 38.38 O
TER

Atoms:
OP1: (20.637,139.940,110.024)
OP2: (19.794,141.550,108.216)
C3': (24.550,142.016,110.543)
C1': (25.394,143.510,108.918)
C5': (23.457,140.503,108.770)
O4': (24.869,142.389,108.246)
C8: (23.231,144.736,108.244)
O2': (26.856,142.697,110.646)
C6: (24.191,148.110,107.951)
C5: (23.950,146.732,108.130)
C4: (25.020,145.962,108.545)
P: (20.830,140.600,108.710)
C4': (24.649,141.325,109.195)
C2': (25.547,143.153,110.403)
C2: (26.356,147.695,108.650)
N1: (25.427,148.566,108.238)
N3: (26.261,146.386,108.826)
N6: (23.284,148.982,107.501)
N7: (22.819,145.946,107.959)
N9: (24.562,144.671,108.591)
O5': (22.259,141.304,108.753)
O3': (24.952,141.106,111.554)
C4: (26.892,138.076,118.330)
N3: (26.056,136.996,118.515)
OP1: (22.640,140.332,111.926)
OP2: (23.897,141.646,113.706)
C2: (25.243,136.425,117.581)
C1': (24.557,136.424,115.247)
C3': (22.995,136.851,113.568)
O5': (24.493,139.279,113.208)
O4': (25.299,136.626,114.064)
C5': (24.771,138.193,112.329)
P: (23.895,140.636,112.645)
C4': (24.395,136.898,112.976)
C2': (23.226,137.127,115.036)
O2': (22.227,136.497,115.804)
N1: (25.317,137.013,116.340)
O4: (27.621,138.440,119.245)
O2: (24.511,135.479,117.844)
C6: (26.096,138.108,116.104)
C5: (26.861,138.645,117.027)
O3': (22.512,135.533,113.464)
Image (generated by PyMOL):
PyMOL image
show in jmol