ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ8:0520:0521

Extra

PDB:
ATOM 1 O3' G A 519 20.908 138.324 107.260 1.00 45.27 O
ATOM 2 P A A 520 20.697 139.483 108.360 1.00 44.07 P
ATOM 3 OP1 A A 520 20.331 138.795 109.629 1.00 45.16 O
ATOM 4 OP2 A A 520 19.801 140.533 107.814 1.00 41.72 O
ATOM 5 O5' A A 520 22.144 140.131 108.519 1.00 43.09 O
ATOM 6 C5' A A 520 23.316 139.325 108.763 1.00 40.52 C
ATOM 7 C4' A A 520 24.452 140.204 109.244 1.00 40.56 C
ATOM 8 O4' A A 520 24.646 141.279 108.289 1.00 41.35 O
ATOM 9 C3' A A 520 24.200 140.938 110.556 1.00 40.11 C
ATOM 10 O3' A A 520 24.602 140.118 111.643 1.00 40.56 O
ATOM 11 C2' A A 520 25.152 142.127 110.465 1.00 40.40 C
ATOM 12 O2' A A 520 26.466 141.791 110.863 1.00 41.50 O
ATOM 13 C1' A A 520 25.150 142.419 108.963 1.00 39.85 C
ATOM 14 N9 A A 520 24.374 143.584 108.554 1.00 39.18 N
ATOM 15 C8 A A 520 23.066 143.628 108.141 1.00 39.69 C
ATOM 16 N7 A A 520 22.660 144.829 107.804 1.00 40.18 N
ATOM 17 C5 A A 520 23.775 145.629 108.011 1.00 40.40 C
ATOM 18 C6 A A 520 24.003 147.001 107.820 1.00 40.17 C
ATOM 19 N6 A A 520 23.086 147.845 107.344 1.00 42.01 N
ATOM 20 N1 A A 520 25.225 147.484 108.130 1.00 38.63 N
ATOM 21 C2 A A 520 26.149 146.639 108.593 1.00 37.93 C
ATOM 22 N3 A A 520 26.060 145.331 108.806 1.00 39.73 N
ATOM 23 C4 A A 520 24.833 144.879 108.489 1.00 39.95 C
ATOM 24 P U A 521 23.519 139.565 112.683 1.00 38.07 P
ATOM 25 OP1 U A 521 22.274 139.222 111.968 1.00 41.93 O
ATOM 26 OP2 U A 521 23.477 140.517 113.813 1.00 40.32 O
ATOM 27 O5' U A 521 24.163 138.194 113.171 1.00 40.72 O
TER

ATOM 1 O3' A B 520 24.602 140.118 111.643 1.00 40.56 O
ATOM 2 P U B 521 23.519 139.565 112.683 1.00 38.07 P
ATOM 3 OP1 U B 521 22.274 139.222 111.968 1.00 41.93 O
ATOM 4 OP2 U B 521 23.477 140.517 113.813 1.00 40.32 O
ATOM 5 O5' U B 521 24.163 138.194 113.171 1.00 40.72 O
ATOM 6 C5' U B 521 24.451 137.153 112.223 1.00 39.81 C
ATOM 7 C4' U B 521 24.135 135.810 112.822 1.00 42.45 C
ATOM 8 O4' U B 521 25.079 135.556 113.896 1.00 42.42 O
ATOM 9 C3' U B 521 22.742 135.693 113.443 1.00 42.55 C
ATOM 10 O3' U B 521 22.284 134.346 113.342 1.00 43.22 O
ATOM 11 C2' U B 521 23.019 136.035 114.905 1.00 42.90 C
ATOM 12 O2' U B 521 22.086 135.528 115.840 1.00 45.00 O
ATOM 13 C1' U B 521 24.374 135.365 115.106 1.00 42.47 C
ATOM 14 N1 U B 521 25.152 135.942 116.209 1.00 40.40 N
ATOM 15 C2 U B 521 25.117 135.285 117.419 1.00 40.40 C
ATOM 16 O2 U B 521 24.471 134.260 117.602 1.00 40.88 O
ATOM 17 N3 U B 521 25.859 135.872 118.414 1.00 39.88 N
ATOM 18 C4 U B 521 26.614 137.027 118.317 1.00 40.63 C
ATOM 19 O4 U B 521 27.217 137.442 119.306 1.00 41.38 O
ATOM 20 C5 U B 521 26.599 137.644 117.030 1.00 39.56 C
ATOM 21 C6 U B 521 25.886 137.097 116.045 1.00 40.86 C
ATOM 22 P C B 522 21.431 133.876 112.055 1.00 43.78 P
ATOM 23 OP1 C B 522 20.758 135.040 111.438 1.00 44.21 O
ATOM 24 OP2 C B 522 20.624 132.697 112.472 1.00 45.02 O
ATOM 25 O5' C B 522 22.537 133.390 111.019 1.00 43.78 O
TER

Atoms:
OP1: (20.331,138.795,109.629)
OP2: (19.801,140.533,107.814)
C3': (24.200,140.938,110.556)
C1': (25.150,142.419,108.963)
C5': (23.316,139.325,108.763)
O4': (24.646,141.279,108.289)
C8: (23.066,143.628,108.141)
O2': (26.466,141.791,110.863)
C6: (24.003,147.001,107.820)
C5: (23.775,145.629,108.011)
C4: (24.833,144.879,108.489)
P: (20.697,139.483,108.360)
C4': (24.452,140.204,109.244)
C2': (25.152,142.127,110.465)
C2: (26.149,146.639,108.593)
N1: (25.225,147.484,108.130)
N3: (26.060,145.331,108.806)
N6: (23.086,147.845,107.344)
N7: (22.660,144.829,107.804)
N9: (24.374,143.584,108.554)
O5': (22.144,140.131,108.519)
O3': (24.602,140.118,111.643)
C4: (26.614,137.027,118.317)
N3: (25.859,135.872,118.414)
OP1: (22.274,139.222,111.968)
OP2: (23.477,140.517,113.813)
C2: (25.117,135.285,117.419)
C1': (24.374,135.365,115.106)
C3': (22.742,135.693,113.443)
O5': (24.163,138.194,113.171)
O4': (25.079,135.556,113.896)
C5': (24.451,137.153,112.223)
P: (23.519,139.565,112.683)
C4': (24.135,135.810,112.822)
C2': (23.019,136.035,114.905)
O2': (22.086,135.528,115.840)
N1: (25.152,135.942,116.209)
O4: (27.217,137.442,119.306)
O2: (24.471,134.260,117.602)
C6: (25.886,137.097,116.045)
C5: (26.599,137.644,117.030)
O3': (22.284,134.346,113.342)
Image (generated by PyMOL):
PyMOL image
show in jmol