ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQK:0520:0521

Extra

PDB:
ATOM 1 O3' G A 519 20.959 138.482 107.311 1.00 45.98 O
ATOM 2 P A A 520 20.718 139.615 108.428 1.00 45.96 P
ATOM 3 OP1 A A 520 20.349 138.869 109.658 1.00 48.13 O
ATOM 4 OP2 A A 520 19.818 140.674 107.922 1.00 47.11 O
ATOM 5 O5' A A 520 22.159 140.273 108.623 1.00 46.58 O
ATOM 6 C5' A A 520 23.340 139.467 108.823 1.00 42.42 C
ATOM 7 C4' A A 520 24.474 140.327 109.334 1.00 42.82 C
ATOM 8 O4' A A 520 24.695 141.410 108.395 1.00 41.50 O
ATOM 9 C3' A A 520 24.223 141.031 110.664 1.00 42.09 C
ATOM 10 O3' A A 520 24.642 140.192 111.736 1.00 41.21 O
ATOM 11 C2' A A 520 25.163 142.232 110.594 1.00 41.49 C
ATOM 12 O2' A A 520 26.482 141.918 110.993 1.00 42.80 O
ATOM 13 C1' A A 520 25.173 142.543 109.094 1.00 40.50 C
ATOM 14 N9 A A 520 24.396 143.704 108.687 1.00 39.43 N
ATOM 15 C8 A A 520 23.078 143.755 108.318 1.00 39.09 C
ATOM 16 N7 A A 520 22.679 144.947 107.955 1.00 39.69 N
ATOM 17 C5 A A 520 23.806 145.736 108.103 1.00 41.08 C
ATOM 18 C6 A A 520 24.045 147.098 107.862 1.00 40.53 C
ATOM 19 N6 A A 520 23.123 147.938 107.391 1.00 42.45 N
ATOM 20 N1 A A 520 25.280 147.571 108.117 1.00 37.81 N
ATOM 21 C2 A A 520 26.206 146.728 108.580 1.00 38.59 C
ATOM 22 N3 A A 520 26.106 145.428 108.840 1.00 40.32 N
ATOM 23 C4 A A 520 24.867 144.987 108.573 1.00 40.39 C
ATOM 24 P U A 521 23.578 139.608 112.779 1.00 39.61 P
ATOM 25 OP1 U A 521 22.356 139.202 112.065 1.00 41.97 O
ATOM 26 OP2 U A 521 23.489 140.558 113.903 1.00 40.06 O
ATOM 27 O5' U A 521 24.277 138.271 113.285 1.00 42.67 O
TER

ATOM 1 O3' A B 520 24.642 140.192 111.736 1.00 41.21 O
ATOM 2 P U B 521 23.578 139.608 112.779 1.00 39.61 P
ATOM 3 OP1 U B 521 22.356 139.202 112.065 1.00 41.97 O
ATOM 4 OP2 U B 521 23.489 140.558 113.903 1.00 40.06 O
ATOM 5 O5' U B 521 24.277 138.271 113.285 1.00 42.67 O
ATOM 6 C5' U B 521 24.576 137.212 112.354 1.00 40.93 C
ATOM 7 C4' U B 521 24.221 135.879 112.956 1.00 42.59 C
ATOM 8 O4' U B 521 25.142 135.604 114.043 1.00 42.49 O
ATOM 9 C3' U B 521 22.817 135.795 113.553 1.00 42.88 C
ATOM 10 O3' U B 521 22.333 134.457 113.451 1.00 41.04 O
ATOM 11 C2' U B 521 23.080 136.146 115.017 1.00 43.28 C
ATOM 12 O2' U B 521 22.124 135.669 115.942 1.00 43.98 O
ATOM 13 C1' U B 521 24.416 135.448 115.243 1.00 43.31 C
ATOM 14 N1 U B 521 25.193 136.018 116.349 1.00 42.42 N
ATOM 15 C2 U B 521 25.170 135.343 117.552 1.00 42.40 C
ATOM 16 O2 U B 521 24.540 134.307 117.720 1.00 41.29 O
ATOM 17 N3 U B 521 25.911 135.925 118.550 1.00 41.11 N
ATOM 18 C4 U B 521 26.654 137.090 118.462 1.00 41.86 C
ATOM 19 O4 U B 521 27.268 137.498 119.447 1.00 40.45 O
ATOM 20 C5 U B 521 26.626 137.720 117.183 1.00 41.48 C
ATOM 21 C6 U B 521 25.913 137.179 116.196 1.00 42.19 C
ATOM 22 P C B 522 21.472 134.001 112.164 1.00 42.17 P
ATOM 23 OP1 C B 522 20.819 135.174 111.553 1.00 41.50 O
ATOM 24 OP2 C B 522 20.648 132.833 112.573 1.00 42.05 O
ATOM 25 O5' C B 522 22.568 133.507 111.126 1.00 42.07 O
TER

Atoms:
OP1: (20.349,138.869,109.658)
OP2: (19.818,140.674,107.922)
C3': (24.223,141.031,110.664)
C1': (25.173,142.543,109.094)
C5': (23.340,139.467,108.823)
O4': (24.695,141.410,108.395)
C8: (23.078,143.755,108.318)
O2': (26.482,141.918,110.993)
C6: (24.045,147.098,107.862)
C5: (23.806,145.736,108.103)
C4: (24.867,144.987,108.573)
P: (20.718,139.615,108.428)
C4': (24.474,140.327,109.334)
C2': (25.163,142.232,110.594)
C2: (26.206,146.728,108.580)
N1: (25.280,147.571,108.117)
N3: (26.106,145.428,108.840)
N6: (23.123,147.938,107.391)
N7: (22.679,144.947,107.955)
N9: (24.396,143.704,108.687)
O5': (22.159,140.273,108.623)
O3': (24.642,140.192,111.736)
C4: (26.654,137.090,118.462)
N3: (25.911,135.925,118.550)
OP1: (22.356,139.202,112.065)
OP2: (23.489,140.558,113.903)
C2: (25.170,135.343,117.552)
C1': (24.416,135.448,115.243)
C3': (22.817,135.795,113.553)
O5': (24.277,138.271,113.285)
O4': (25.142,135.604,114.043)
C5': (24.576,137.212,112.354)
P: (23.578,139.608,112.779)
C4': (24.221,135.879,112.956)
C2': (23.080,136.146,115.017)
O2': (22.124,135.669,115.942)
N1: (25.193,136.018,116.349)
O4: (27.268,137.498,119.447)
O2: (24.540,134.307,117.720)
C6: (25.913,137.179,116.196)
C5: (26.626,137.720,117.183)
O3': (22.333,134.457,113.451)
Image (generated by PyMOL):
PyMOL image
show in jmol