Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A712:A733
Extra
PDB:
ATOM 1 O3' U A 711 39.150 -13.647 8.958 1.00 55.19 O
ATOM 2 P G A 712 38.415 -12.254 9.258 1.00 54.74 P
ATOM 3 OP1 G A 712 39.433 -11.345 9.848 1.00 50.12 O
ATOM 4 OP2 G A 712 37.192 -12.591 10.035 1.00 47.07 O
ATOM 5 O5' G A 712 37.988 -11.712 7.806 1.00 55.04 O
ATOM 6 C5' G A 712 38.977 -11.493 6.785 1.00 52.93 C
ATOM 7 C4' G A 712 38.343 -11.144 5.449 1.00 50.80 C
ATOM 8 O4' G A 712 37.537 -12.248 4.948 1.00 52.65 O
ATOM 9 C3' G A 712 37.441 -9.925 5.431 1.00 50.69 C
ATOM 10 O3' G A 712 37.649 -9.280 4.166 1.00 47.72 O
ATOM 11 C2' G A 712 36.051 -10.555 5.502 1.00 49.51 C
ATOM 12 O2' G A 712 35.005 -9.750 5.028 1.00 48.98 O
ATOM 13 C1' G A 712 36.244 -11.779 4.613 1.00 52.71 C
ATOM 14 N9 G A 712 35.272 -12.873 4.760 1.00 53.34 N
ATOM 15 C8 G A 712 34.868 -13.471 5.934 1.00 51.19 C
ATOM 16 N7 G A 712 34.014 -14.447 5.749 1.00 51.10 N
ATOM 17 C5 G A 712 33.835 -14.505 4.368 1.00 48.78 C
ATOM 18 C6 G A 712 33.036 -15.399 3.561 1.00 51.03 C
ATOM 19 O6 G A 712 32.331 -16.347 3.913 1.00 60.54 O
ATOM 20 N1 G A 712 33.134 -15.103 2.216 1.00 48.22 N
ATOM 21 C2 G A 712 33.899 -14.101 1.691 1.00 55.07 C
ATOM 22 N2 G A 712 33.838 -13.985 0.353 1.00 54.60 N
ATOM 23 N3 G A 712 34.666 -13.272 2.413 1.00 53.45 N
ATOM 24 C4 G A 712 34.586 -13.531 3.738 1.00 49.61 C
ATOM 25 P A A 713 37.896 -7.690 4.091 1.00 50.06 P
ATOM 26 OP1 A A 713 38.672 -7.313 5.310 1.00 41.59 O
ATOM 27 OP2 A A 713 36.609 -6.998 3.767 1.00 47.37 O
ATOM 28 O5' A A 713 38.777 -7.464 2.786 1.00 44.61 O
TER
ATOM 1 O3' U B 732 25.322 -7.394 3.199 1.00 64.70 O
ATOM 2 P G B 733 25.866 -8.875 2.843 1.00 76.19 P
ATOM 3 OP1 G B 733 24.718 -9.699 2.412 1.00 77.09 O
ATOM 4 OP2 G B 733 26.711 -9.348 3.974 1.00 60.24 O
ATOM 5 O5' G B 733 26.837 -8.662 1.591 1.00 67.44 O
ATOM 6 C5' G B 733 26.419 -8.024 0.375 1.00 58.52 C
ATOM 7 C4' G B 733 27.633 -7.746 -0.494 1.00 57.07 C
ATOM 8 O4' G B 733 28.539 -6.930 0.294 1.00 55.62 O
ATOM 9 C3' G B 733 28.445 -8.977 -0.900 1.00 56.33 C
ATOM 10 O3' G B 733 28.066 -9.452 -2.199 1.00 57.47 O
ATOM 11 C2' G B 733 29.880 -8.453 -0.947 1.00 52.97 C
ATOM 12 O2' G B 733 30.158 -7.841 -2.197 1.00 48.99 O
ATOM 13 C1' G B 733 29.876 -7.383 0.147 1.00 54.75 C
ATOM 14 N9 G B 733 30.369 -7.740 1.484 1.00 56.64 N
ATOM 15 C8 G B 733 29.623 -8.310 2.491 1.00 58.09 C
ATOM 16 N7 G B 733 30.254 -8.368 3.630 1.00 61.30 N
ATOM 17 C5 G B 733 31.508 -7.834 3.363 1.00 57.07 C
ATOM 18 C6 G B 733 32.604 -7.606 4.227 1.00 54.02 C
ATOM 19 O6 G B 733 32.679 -7.797 5.446 1.00 58.38 O
ATOM 20 N1 G B 733 33.689 -7.080 3.549 1.00 50.37 N
ATOM 21 C2 G B 733 33.718 -6.798 2.218 1.00 56.04 C
ATOM 22 N2 G B 733 34.885 -6.335 1.764 1.00 54.63 N
ATOM 23 N3 G B 733 32.689 -6.967 1.396 1.00 57.31 N
ATOM 24 C4 G B 733 31.619 -7.487 2.031 1.00 56.12 C
ATOM 25 P G B 734 27.615 -10.994 -2.417 1.00 61.15 P
ATOM 26 OP1 G B 734 26.323 -10.935 -3.145 1.00 55.27 O
ATOM 27 OP2 G B 734 27.711 -11.732 -1.117 1.00 50.50 O
ATOM 28 O5' G B 734 28.682 -11.628 -3.425 1.00 55.19 O
TER
ATOM 2 P G A 712 38.415 -12.254 9.258 1.00 54.74 P
ATOM 3 OP1 G A 712 39.433 -11.345 9.848 1.00 50.12 O
ATOM 4 OP2 G A 712 37.192 -12.591 10.035 1.00 47.07 O
ATOM 5 O5' G A 712 37.988 -11.712 7.806 1.00 55.04 O
ATOM 6 C5' G A 712 38.977 -11.493 6.785 1.00 52.93 C
ATOM 7 C4' G A 712 38.343 -11.144 5.449 1.00 50.80 C
ATOM 8 O4' G A 712 37.537 -12.248 4.948 1.00 52.65 O
ATOM 9 C3' G A 712 37.441 -9.925 5.431 1.00 50.69 C
ATOM 10 O3' G A 712 37.649 -9.280 4.166 1.00 47.72 O
ATOM 11 C2' G A 712 36.051 -10.555 5.502 1.00 49.51 C
ATOM 12 O2' G A 712 35.005 -9.750 5.028 1.00 48.98 O
ATOM 13 C1' G A 712 36.244 -11.779 4.613 1.00 52.71 C
ATOM 14 N9 G A 712 35.272 -12.873 4.760 1.00 53.34 N
ATOM 15 C8 G A 712 34.868 -13.471 5.934 1.00 51.19 C
ATOM 16 N7 G A 712 34.014 -14.447 5.749 1.00 51.10 N
ATOM 17 C5 G A 712 33.835 -14.505 4.368 1.00 48.78 C
ATOM 18 C6 G A 712 33.036 -15.399 3.561 1.00 51.03 C
ATOM 19 O6 G A 712 32.331 -16.347 3.913 1.00 60.54 O
ATOM 20 N1 G A 712 33.134 -15.103 2.216 1.00 48.22 N
ATOM 21 C2 G A 712 33.899 -14.101 1.691 1.00 55.07 C
ATOM 22 N2 G A 712 33.838 -13.985 0.353 1.00 54.60 N
ATOM 23 N3 G A 712 34.666 -13.272 2.413 1.00 53.45 N
ATOM 24 C4 G A 712 34.586 -13.531 3.738 1.00 49.61 C
ATOM 25 P A A 713 37.896 -7.690 4.091 1.00 50.06 P
ATOM 26 OP1 A A 713 38.672 -7.313 5.310 1.00 41.59 O
ATOM 27 OP2 A A 713 36.609 -6.998 3.767 1.00 47.37 O
ATOM 28 O5' A A 713 38.777 -7.464 2.786 1.00 44.61 O
TER
ATOM 1 O3' U B 732 25.322 -7.394 3.199 1.00 64.70 O
ATOM 2 P G B 733 25.866 -8.875 2.843 1.00 76.19 P
ATOM 3 OP1 G B 733 24.718 -9.699 2.412 1.00 77.09 O
ATOM 4 OP2 G B 733 26.711 -9.348 3.974 1.00 60.24 O
ATOM 5 O5' G B 733 26.837 -8.662 1.591 1.00 67.44 O
ATOM 6 C5' G B 733 26.419 -8.024 0.375 1.00 58.52 C
ATOM 7 C4' G B 733 27.633 -7.746 -0.494 1.00 57.07 C
ATOM 8 O4' G B 733 28.539 -6.930 0.294 1.00 55.62 O
ATOM 9 C3' G B 733 28.445 -8.977 -0.900 1.00 56.33 C
ATOM 10 O3' G B 733 28.066 -9.452 -2.199 1.00 57.47 O
ATOM 11 C2' G B 733 29.880 -8.453 -0.947 1.00 52.97 C
ATOM 12 O2' G B 733 30.158 -7.841 -2.197 1.00 48.99 O
ATOM 13 C1' G B 733 29.876 -7.383 0.147 1.00 54.75 C
ATOM 14 N9 G B 733 30.369 -7.740 1.484 1.00 56.64 N
ATOM 15 C8 G B 733 29.623 -8.310 2.491 1.00 58.09 C
ATOM 16 N7 G B 733 30.254 -8.368 3.630 1.00 61.30 N
ATOM 17 C5 G B 733 31.508 -7.834 3.363 1.00 57.07 C
ATOM 18 C6 G B 733 32.604 -7.606 4.227 1.00 54.02 C
ATOM 19 O6 G B 733 32.679 -7.797 5.446 1.00 58.38 O
ATOM 20 N1 G B 733 33.689 -7.080 3.549 1.00 50.37 N
ATOM 21 C2 G B 733 33.718 -6.798 2.218 1.00 56.04 C
ATOM 22 N2 G B 733 34.885 -6.335 1.764 1.00 54.63 N
ATOM 23 N3 G B 733 32.689 -6.967 1.396 1.00 57.31 N
ATOM 24 C4 G B 733 31.619 -7.487 2.031 1.00 56.12 C
ATOM 25 P G B 734 27.615 -10.994 -2.417 1.00 61.15 P
ATOM 26 OP1 G B 734 26.323 -10.935 -3.145 1.00 55.27 O
ATOM 27 OP2 G B 734 27.711 -11.732 -1.117 1.00 50.50 O
ATOM 28 O5' G B 734 28.682 -11.628 -3.425 1.00 55.19 O
TER
Atoms:
OP1: (39.433,-11.345,9.848)
OP2: (37.192,-12.591,10.035)
C3': (37.441,-9.925,5.431)
C1': (36.244,-11.779,4.613)
C5': (38.977,-11.493,6.785)
O6: (32.331,-16.347,3.913)
O4': (37.537,-12.248,4.948)
C8: (34.868,-13.471,5.934)
C2: (33.899,-14.101,1.691)
C6: (33.036,-15.399,3.561)
C5: (33.835,-14.505,4.368)
C4: (34.586,-13.531,3.738)
P: (38.415,-12.254,9.258)
C4': (38.343,-11.144,5.449)
C2': (36.051,-10.555,5.502)
O2': (35.005,-9.750,5.028)
N1: (33.134,-15.103,2.216)
N2: (33.838,-13.985,0.353)
N3: (34.666,-13.272,2.413)
N7: (34.014,-14.447,5.749)
N9: (35.272,-12.873,4.760)
O5': (37.988,-11.712,7.806)
O3': (37.649,-9.280,4.166)
OP2: (37.192,-12.591,10.035)
C3': (37.441,-9.925,5.431)
C1': (36.244,-11.779,4.613)
C5': (38.977,-11.493,6.785)
O6: (32.331,-16.347,3.913)
O4': (37.537,-12.248,4.948)
C8: (34.868,-13.471,5.934)
C2: (33.899,-14.101,1.691)
C6: (33.036,-15.399,3.561)
C5: (33.835,-14.505,4.368)
C4: (34.586,-13.531,3.738)
P: (38.415,-12.254,9.258)
C4': (38.343,-11.144,5.449)
C2': (36.051,-10.555,5.502)
O2': (35.005,-9.750,5.028)
N1: (33.134,-15.103,2.216)
N2: (33.838,-13.985,0.353)
N3: (34.666,-13.272,2.413)
N7: (34.014,-14.447,5.749)
N9: (35.272,-12.873,4.760)
O5': (37.988,-11.712,7.806)
O3': (37.649,-9.280,4.166)
OP1: (24.718,-9.699,2.412)
OP2: (26.711,-9.348,3.974)
C3': (28.445,-8.977,-0.900)
C1': (29.876,-7.383,0.147)
C5': (26.419,-8.024,0.375)
O6: (32.679,-7.797,5.446)
O4': (28.539,-6.930,0.294)
C8: (29.623,-8.310,2.491)
C2: (33.718,-6.798,2.218)
C6: (32.604,-7.606,4.227)
C5: (31.508,-7.834,3.363)
C4: (31.619,-7.487,2.031)
P: (25.866,-8.875,2.843)
C4': (27.633,-7.746,-0.494)
C2': (29.880,-8.453,-0.947)
O2': (30.158,-7.841,-2.197)
N1: (33.689,-7.080,3.549)
N2: (34.885,-6.335,1.764)
N3: (32.689,-6.967,1.396)
N7: (30.254,-8.368,3.630)
N9: (30.369,-7.740,1.484)
O5': (26.837,-8.662,1.591)
O3': (28.066,-9.452,-2.199)
OP2: (26.711,-9.348,3.974)
C3': (28.445,-8.977,-0.900)
C1': (29.876,-7.383,0.147)
C5': (26.419,-8.024,0.375)
O6: (32.679,-7.797,5.446)
O4': (28.539,-6.930,0.294)
C8: (29.623,-8.310,2.491)
C2: (33.718,-6.798,2.218)
C6: (32.604,-7.606,4.227)
C5: (31.508,-7.834,3.363)
C4: (31.619,-7.487,2.031)
P: (25.866,-8.875,2.843)
C4': (27.633,-7.746,-0.494)
C2': (29.880,-8.453,-0.947)
O2': (30.158,-7.841,-2.197)
N1: (33.689,-7.080,3.549)
N2: (34.885,-6.335,1.764)
N3: (32.689,-6.967,1.396)
N7: (30.254,-8.368,3.630)
N9: (30.369,-7.740,1.484)
O5': (26.837,-8.662,1.591)
O3': (28.066,-9.452,-2.199)
Image (generated by PyMOL):