ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQO:0520:0521

Extra

PDB:
ATOM 1 O3' G A 519 21.087 139.004 107.286 1.00 48.04 O
ATOM 2 P A A 520 20.821 140.139 108.403 1.00 47.98 P
ATOM 3 OP1 A A 520 20.405 139.411 109.622 1.00 48.82 O
ATOM 4 OP2 A A 520 19.962 141.221 107.875 1.00 47.93 O
ATOM 5 O5' A A 520 22.260 140.777 108.646 1.00 48.15 O
ATOM 6 C5' A A 520 23.434 139.960 108.832 1.00 42.67 C
ATOM 7 C4' A A 520 24.578 140.815 109.333 1.00 42.73 C
ATOM 8 O4' A A 520 24.785 141.901 108.398 1.00 40.63 O
ATOM 9 C3' A A 520 24.344 141.523 110.663 1.00 41.30 C
ATOM 10 O3' A A 520 24.742 140.673 111.732 1.00 42.61 O
ATOM 11 C2' A A 520 25.305 142.706 110.588 1.00 41.79 C
ATOM 12 O2' A A 520 26.623 142.360 110.969 1.00 40.61 O
ATOM 13 C1' A A 520 25.296 143.024 109.090 1.00 40.43 C
ATOM 14 N9 A A 520 24.531 144.200 108.694 1.00 38.89 N
ATOM 15 C8 A A 520 23.211 144.269 108.333 1.00 39.40 C
ATOM 16 N7 A A 520 22.823 145.471 107.978 1.00 39.99 N
ATOM 17 C5 A A 520 23.967 146.245 108.120 1.00 40.66 C
ATOM 18 C6 A A 520 24.225 147.606 107.881 1.00 39.79 C
ATOM 19 N6 A A 520 23.322 148.460 107.396 1.00 41.86 N
ATOM 20 N1 A A 520 25.461 148.064 108.147 1.00 37.82 N
ATOM 21 C2 A A 520 26.379 147.204 108.603 1.00 40.09 C
ATOM 22 N3 A A 520 26.265 145.903 108.851 1.00 40.29 N
ATOM 23 C4 A A 520 25.019 145.479 108.583 1.00 39.42 C
ATOM 24 P U A 521 23.664 140.140 112.791 1.00 39.48 P
ATOM 25 OP1 U A 521 22.427 139.775 112.081 1.00 44.43 O
ATOM 26 OP2 U A 521 23.615 141.120 113.894 1.00 42.66 O
ATOM 27 O5' U A 521 24.307 138.777 113.300 1.00 42.45 O
TER

ATOM 1 O3' A B 520 24.742 140.673 111.732 1.00 42.61 O
ATOM 2 P U B 521 23.664 140.140 112.791 1.00 39.48 P
ATOM 3 OP1 U B 521 22.427 139.775 112.081 1.00 44.43 O
ATOM 4 OP2 U B 521 23.615 141.120 113.894 1.00 42.66 O
ATOM 5 O5' U B 521 24.307 138.777 113.300 1.00 42.45 O
ATOM 6 C5' U B 521 24.602 137.725 112.364 1.00 41.50 C
ATOM 7 C4' U B 521 24.237 136.390 112.953 1.00 43.58 C
ATOM 8 O4' U B 521 25.164 136.094 114.028 1.00 43.50 O
ATOM 9 C3' U B 521 22.838 136.298 113.560 1.00 43.59 C
ATOM 10 O3' U B 521 22.359 134.955 113.465 1.00 42.47 O
ATOM 11 C2' U B 521 23.112 136.638 115.020 1.00 43.69 C
ATOM 12 O2' U B 521 22.162 136.153 115.942 1.00 44.27 O
ATOM 13 C1' U B 521 24.446 135.933 115.231 1.00 43.79 C
ATOM 14 N1 U B 521 25.235 136.498 116.330 1.00 42.48 N
ATOM 15 C2 U B 521 25.221 135.818 117.527 1.00 42.90 C
ATOM 16 O2 U B 521 24.589 134.782 117.692 1.00 42.99 O
ATOM 17 N3 U B 521 25.971 136.392 118.522 1.00 41.00 N
ATOM 18 C4 U B 521 26.722 137.548 118.431 1.00 40.95 C
ATOM 19 O4 U B 521 27.348 137.940 119.408 1.00 41.14 O
ATOM 20 C5 U B 521 26.685 138.187 117.155 1.00 41.58 C
ATOM 21 C6 U B 521 25.958 137.657 116.174 1.00 41.33 C
ATOM 22 P C B 522 21.521 134.490 112.172 1.00 42.99 P
ATOM 23 OP1 C B 522 20.844 135.662 111.583 1.00 44.07 O
ATOM 24 OP2 C B 522 20.718 133.297 112.553 1.00 44.78 O
ATOM 25 O5' C B 522 22.640 134.032 111.140 1.00 43.86 O
TER

Atoms:
OP1: (20.405,139.411,109.622)
OP2: (19.962,141.221,107.875)
C3': (24.344,141.523,110.663)
C1': (25.296,143.024,109.090)
C5': (23.434,139.960,108.832)
O4': (24.785,141.901,108.398)
C8: (23.211,144.269,108.333)
O2': (26.623,142.360,110.969)
C6: (24.225,147.606,107.881)
C5: (23.967,146.245,108.120)
C4: (25.019,145.479,108.583)
P: (20.821,140.139,108.403)
C4': (24.578,140.815,109.333)
C2': (25.305,142.706,110.588)
C2: (26.379,147.204,108.603)
N1: (25.461,148.064,108.147)
N3: (26.265,145.903,108.851)
N6: (23.322,148.460,107.396)
N7: (22.823,145.471,107.978)
N9: (24.531,144.200,108.694)
O5': (22.260,140.777,108.646)
O3': (24.742,140.673,111.732)
C4: (26.722,137.548,118.431)
N3: (25.971,136.392,118.522)
OP1: (22.427,139.775,112.081)
OP2: (23.615,141.120,113.894)
C2: (25.221,135.818,117.527)
C1': (24.446,135.933,115.231)
C3': (22.838,136.298,113.560)
O5': (24.307,138.777,113.300)
O4': (25.164,136.094,114.028)
C5': (24.602,137.725,112.364)
P: (23.664,140.140,112.791)
C4': (24.237,136.390,112.953)
C2': (23.112,136.638,115.020)
O2': (22.162,136.153,115.942)
N1: (25.235,136.498,116.330)
O4: (27.348,137.940,119.408)
O2: (24.589,134.782,117.692)
C6: (25.958,137.657,116.174)
C5: (26.685,138.187,117.155)
O3': (22.359,134.955,113.465)
Image (generated by PyMOL):
PyMOL image
show in jmol