ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQP:0520:0521

Extra

PDB:
ATOM 1 O3' G A 519 20.886 138.212 107.228 1.00 44.42 O
ATOM 2 P A A 520 20.647 139.350 108.343 1.00 43.52 P
ATOM 3 OP1 A A 520 20.292 138.620 109.582 1.00 45.99 O
ATOM 4 OP2 A A 520 19.743 140.404 107.840 1.00 44.21 O
ATOM 5 O5' A A 520 22.089 140.000 108.530 1.00 45.35 O
ATOM 6 C5' A A 520 23.270 139.184 108.706 1.00 41.49 C
ATOM 7 C4' A A 520 24.412 140.035 109.218 1.00 42.24 C
ATOM 8 O4' A A 520 24.626 141.126 108.289 1.00 41.38 O
ATOM 9 C3' A A 520 24.166 140.727 110.555 1.00 41.79 C
ATOM 10 O3' A A 520 24.587 139.873 111.614 1.00 42.70 O
ATOM 11 C2' A A 520 25.104 141.931 110.492 1.00 42.25 C
ATOM 12 O2' A A 520 26.424 141.623 110.890 1.00 43.68 O
ATOM 13 C1' A A 520 25.115 142.249 108.994 1.00 41.26 C
ATOM 14 N9 A A 520 24.352 143.423 108.593 1.00 40.41 N
ATOM 15 C8 A A 520 23.032 143.500 108.240 1.00 40.86 C
ATOM 16 N7 A A 520 22.648 144.704 107.895 1.00 40.97 N
ATOM 17 C5 A A 520 23.793 145.471 108.033 1.00 42.17 C
ATOM 18 C6 A A 520 24.053 146.829 107.806 1.00 41.93 C
ATOM 19 N6 A A 520 23.142 147.691 107.355 1.00 43.19 N
ATOM 20 N1 A A 520 25.300 147.278 108.054 1.00 41.30 N
ATOM 21 C2 A A 520 26.218 146.412 108.493 1.00 40.98 C
ATOM 22 N3 A A 520 26.100 145.113 108.733 1.00 41.10 N
ATOM 23 C4 A A 520 24.847 144.697 108.478 1.00 41.84 C
ATOM 24 P U A 521 23.531 139.313 112.686 1.00 40.44 P
ATOM 25 OP1 U A 521 22.310 138.850 112.001 1.00 42.81 O
ATOM 26 OP2 U A 521 23.430 140.316 113.763 1.00 40.90 O
ATOM 27 O5' U A 521 24.263 138.008 113.231 1.00 42.44 O
TER

ATOM 1 O3' A B 520 24.587 139.873 111.614 1.00 42.70 O
ATOM 2 P U B 521 23.531 139.313 112.686 1.00 40.44 P
ATOM 3 OP1 U B 521 22.310 138.850 112.001 1.00 42.81 O
ATOM 4 OP2 U B 521 23.430 140.316 113.763 1.00 40.90 O
ATOM 5 O5' U B 521 24.263 138.008 113.231 1.00 42.44 O
ATOM 6 C5' U B 521 24.637 136.957 112.321 1.00 40.99 C
ATOM 7 C4' U B 521 24.258 135.615 112.893 1.00 44.09 C
ATOM 8 O4' U B 521 25.144 135.320 114.004 1.00 43.98 O
ATOM 9 C3' U B 521 22.836 135.519 113.440 1.00 43.66 C
ATOM 10 O3' U B 521 22.355 134.185 113.309 1.00 43.97 O
ATOM 11 C2' U B 521 23.040 135.845 114.916 1.00 44.31 C
ATOM 12 O2' U B 521 22.054 135.292 115.761 1.00 48.04 O
ATOM 13 C1' U B 521 24.386 135.179 115.185 1.00 43.31 C
ATOM 14 N1 U B 521 25.138 135.786 116.290 1.00 40.86 N
ATOM 15 C2 U B 521 25.133 135.127 117.503 1.00 40.99 C
ATOM 16 O2 U B 521 24.522 134.082 117.688 1.00 41.09 O
ATOM 17 N3 U B 521 25.865 135.736 118.491 1.00 38.53 N
ATOM 18 C4 U B 521 26.575 136.919 118.393 1.00 39.68 C
ATOM 19 O4 U B 521 27.179 137.350 119.375 1.00 38.30 O
ATOM 20 C5 U B 521 26.525 137.539 117.108 1.00 39.39 C
ATOM 21 C6 U B 521 25.827 136.967 116.126 1.00 41.24 C
ATOM 22 P C B 522 21.442 133.778 112.046 1.00 45.37 P
ATOM 23 OP1 C B 522 20.813 135.002 111.487 1.00 46.36 O
ATOM 24 OP2 C B 522 20.589 132.638 112.450 1.00 44.88 O
ATOM 25 O5' C B 522 22.498 133.261 110.975 1.00 45.28 O
TER

Atoms:
OP1: (20.292,138.620,109.582)
OP2: (19.743,140.404,107.840)
C3': (24.166,140.727,110.555)
C1': (25.115,142.249,108.994)
C5': (23.270,139.184,108.706)
O4': (24.626,141.126,108.289)
C8: (23.032,143.500,108.240)
O2': (26.424,141.623,110.890)
C6: (24.053,146.829,107.806)
C5: (23.793,145.471,108.033)
C4: (24.847,144.697,108.478)
P: (20.647,139.350,108.343)
C4': (24.412,140.035,109.218)
C2': (25.104,141.931,110.492)
C2: (26.218,146.412,108.493)
N1: (25.300,147.278,108.054)
N3: (26.100,145.113,108.733)
N6: (23.142,147.691,107.355)
N7: (22.648,144.704,107.895)
N9: (24.352,143.423,108.593)
O5': (22.089,140.000,108.530)
O3': (24.587,139.873,111.614)
C4: (26.575,136.919,118.393)
N3: (25.865,135.736,118.491)
OP1: (22.310,138.850,112.001)
OP2: (23.430,140.316,113.763)
C2: (25.133,135.127,117.503)
C1': (24.386,135.179,115.185)
C3': (22.836,135.519,113.440)
O5': (24.263,138.008,113.231)
O4': (25.144,135.320,114.004)
C5': (24.637,136.957,112.321)
P: (23.531,139.313,112.686)
C4': (24.258,135.615,112.893)
C2': (23.040,135.845,114.916)
O2': (22.054,135.292,115.761)
N1: (25.138,135.786,116.290)
O4: (27.179,137.350,119.375)
O2: (24.522,134.082,117.688)
C6: (25.827,136.967,116.126)
C5: (26.525,137.539,117.108)
O3': (22.355,134.185,113.309)
Image (generated by PyMOL):
PyMOL image
show in jmol