ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OH5:A712:A733

Extra

PDB:
ATOM 1 O3' U A 711 40.252 -13.529 9.431 1.00 45.61 O
ATOM 2 P G A 712 39.394 -12.243 9.826 1.00 51.09 P
ATOM 3 OP1 G A 712 40.280 -11.338 10.599 1.00 59.02 O
ATOM 4 OP2 G A 712 38.143 -12.727 10.455 1.00 52.11 O
ATOM 5 O5' G A 712 39.074 -11.606 8.407 1.00 41.09 O
ATOM 6 C5' G A 712 40.115 -11.268 7.504 1.00 32.09 C
ATOM 7 C4' G A 712 39.573 -10.901 6.153 1.00 38.67 C
ATOM 8 O4' G A 712 38.710 -11.977 5.680 1.00 43.42 O
ATOM 9 C3' G A 712 38.719 -9.645 6.129 1.00 42.33 C
ATOM 10 O3' G A 712 38.820 -9.046 4.849 1.00 42.52 O
ATOM 11 C2' G A 712 37.312 -10.209 6.309 1.00 48.11 C
ATOM 12 O2' G A 712 36.262 -9.359 5.876 1.00 42.54 O
ATOM 13 C1' G A 712 37.407 -11.477 5.471 1.00 43.57 C
ATOM 14 N9 G A 712 36.435 -12.501 5.840 1.00 44.22 N
ATOM 15 C8 G A 712 36.017 -12.921 7.077 1.00 48.38 C
ATOM 16 N7 G A 712 35.065 -13.830 7.002 1.00 54.34 N
ATOM 17 C5 G A 712 34.847 -13.983 5.634 1.00 49.87 C
ATOM 18 C6 G A 712 33.953 -14.801 4.907 1.00 51.50 C
ATOM 19 O6 G A 712 33.131 -15.606 5.348 1.00 70.94 O
ATOM 20 N1 G A 712 34.073 -14.626 3.533 1.00 45.61 N
ATOM 21 C2 G A 712 34.947 -13.764 2.927 1.00 44.55 C
ATOM 22 N2 G A 712 34.956 -13.712 1.591 1.00 46.47 N
ATOM 23 N3 G A 712 35.777 -12.999 3.587 1.00 49.64 N
ATOM 24 C4 G A 712 35.673 -13.160 4.917 1.00 50.83 C
ATOM 25 P A A 713 38.814 -7.464 4.724 1.00 51.57 P
ATOM 26 OP1 A A 713 39.621 -6.947 5.857 1.00 46.64 O
ATOM 27 OP2 A A 713 37.402 -7.037 4.597 1.00 44.21 O
ATOM 28 O5' A A 713 39.577 -7.223 3.361 1.00 35.32 O
TER

ATOM 1 O3' U B 732 25.839 -7.281 3.987 1.00 64.29 O
ATOM 2 P G B 733 26.229 -8.762 3.474 1.00 66.51 P
ATOM 3 OP1 G B 733 25.034 -9.315 2.781 1.00 64.50 O
ATOM 4 OP2 G B 733 26.785 -9.510 4.637 1.00 50.34 O
ATOM 5 O5' G B 733 27.374 -8.466 2.418 1.00 42.11 O
ATOM 6 C5' G B 733 27.060 -7.992 1.129 1.00 38.93 C
ATOM 7 C4' G B 733 28.302 -7.604 0.401 1.00 44.60 C
ATOM 8 O4' G B 733 29.087 -6.728 1.242 1.00 49.19 O
ATOM 9 C3' G B 733 29.239 -8.749 0.038 1.00 40.42 C
ATOM 10 O3' G B 733 28.902 -9.332 -1.209 1.00 45.90 O
ATOM 11 C2' G B 733 30.609 -8.087 0.020 1.00 49.19 C
ATOM 12 O2' G B 733 30.843 -7.472 -1.252 1.00 56.38 O
ATOM 13 C1' G B 733 30.458 -6.992 1.084 1.00 48.01 C
ATOM 14 N9 G B 733 31.005 -7.388 2.401 1.00 48.04 N
ATOM 15 C8 G B 733 30.303 -7.962 3.428 1.00 51.46 C
ATOM 16 N7 G B 733 31.011 -8.177 4.504 1.00 43.93 N
ATOM 17 C5 G B 733 32.263 -7.707 4.189 1.00 42.95 C
ATOM 18 C6 G B 733 33.455 -7.683 4.969 1.00 52.50 C
ATOM 19 O6 G B 733 33.656 -8.096 6.135 1.00 58.16 O
ATOM 20 N1 G B 733 34.494 -7.105 4.243 1.00 46.63 N
ATOM 21 C2 G B 733 34.396 -6.636 2.960 1.00 41.86 C
ATOM 22 N2 G B 733 35.490 -6.124 2.418 1.00 38.69 N
ATOM 23 N3 G B 733 33.305 -6.658 2.234 1.00 47.50 N
ATOM 24 C4 G B 733 32.274 -7.204 2.903 1.00 45.35 C
ATOM 25 P G B 734 28.298 -10.818 -1.301 1.00 47.16 P
ATOM 26 OP1 G B 734 27.249 -10.781 -2.332 1.00 59.83 O
ATOM 27 OP2 G B 734 27.942 -11.245 0.064 1.00 50.97 O
ATOM 28 O5' G B 734 29.532 -11.656 -1.830 1.00 47.13 O
TER

Atoms:
OP1: (40.280,-11.338,10.599)
OP2: (38.143,-12.727,10.455)
C3': (38.719,-9.645,6.129)
C1': (37.407,-11.477,5.471)
C5': (40.115,-11.268,7.504)
O6: (33.131,-15.606,5.348)
O4': (38.710,-11.977,5.680)
C8: (36.017,-12.921,7.077)
C2: (34.947,-13.764,2.927)
C6: (33.953,-14.801,4.907)
C5: (34.847,-13.983,5.634)
C4: (35.673,-13.160,4.917)
P: (39.394,-12.243,9.826)
C4': (39.573,-10.901,6.153)
C2': (37.312,-10.209,6.309)
O2': (36.262,-9.359,5.876)
N1: (34.073,-14.626,3.533)
N2: (34.956,-13.712,1.591)
N3: (35.777,-12.999,3.587)
N7: (35.065,-13.830,7.002)
N9: (36.435,-12.501,5.840)
O5': (39.074,-11.606,8.407)
O3': (38.820,-9.046,4.849)
OP1: (25.034,-9.315,2.781)
OP2: (26.785,-9.510,4.637)
C3': (29.239,-8.749,0.038)
C1': (30.458,-6.992,1.084)
C5': (27.060,-7.992,1.129)
O6: (33.656,-8.096,6.135)
O4': (29.087,-6.728,1.242)
C8: (30.303,-7.962,3.428)
C2: (34.396,-6.636,2.960)
C6: (33.455,-7.683,4.969)
C5: (32.263,-7.707,4.189)
C4: (32.274,-7.204,2.903)
P: (26.229,-8.762,3.474)
C4': (28.302,-7.604,0.401)
C2': (30.609,-8.087,0.020)
O2': (30.843,-7.472,-1.252)
N1: (34.494,-7.105,4.243)
N2: (35.490,-6.124,2.418)
N3: (33.305,-6.658,2.234)
N7: (31.011,-8.177,4.504)
N9: (31.005,-7.388,2.401)
O5': (27.374,-8.466,2.418)
O3': (28.902,-9.332,-1.209)
Image (generated by PyMOL):
PyMOL image
show in jmol