Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0520:0521
Extra
PDB:
ATOM 1 O3' G A 519 20.893 139.572 107.157 1.00 44.69 O
ATOM 2 P A A 520 20.706 140.717 108.272 1.00 43.39 P
ATOM 3 OP1 A A 520 20.422 140.020 109.556 1.00 43.30 O
ATOM 4 OP2 A A 520 19.751 141.724 107.761 1.00 42.99 O
ATOM 5 O5' A A 520 22.147 141.390 108.359 1.00 42.44 O
ATOM 6 C5' A A 520 23.337 140.576 108.391 1.00 38.85 C
ATOM 7 C4' A A 520 24.513 141.384 108.874 1.00 38.33 C
ATOM 8 O4' A A 520 24.721 142.502 107.985 1.00 38.24 O
ATOM 9 C3' A A 520 24.348 142.023 110.239 1.00 38.11 C
ATOM 10 O3' A A 520 24.735 141.087 111.227 1.00 38.91 O
ATOM 11 C2' A A 520 25.337 143.182 110.185 1.00 38.50 C
ATOM 12 O2' A A 520 26.663 142.779 110.445 1.00 39.45 O
ATOM 13 C1' A A 520 25.256 143.589 108.714 1.00 38.69 C
ATOM 14 N9 A A 520 24.468 144.778 108.409 1.00 39.93 N
ATOM 15 C8 A A 520 23.139 144.848 108.098 1.00 39.91 C
ATOM 16 N7 A A 520 22.734 146.050 107.777 1.00 42.68 N
ATOM 17 C5 A A 520 23.869 146.830 107.903 1.00 41.96 C
ATOM 18 C6 A A 520 24.106 148.191 107.676 1.00 42.54 C
ATOM 19 N6 A A 520 23.176 149.035 107.228 1.00 44.27 N
ATOM 20 N1 A A 520 25.348 148.660 107.913 1.00 41.89 N
ATOM 21 C2 A A 520 26.287 147.805 108.334 1.00 41.72 C
ATOM 22 N3 A A 520 26.193 146.497 108.562 1.00 43.10 N
ATOM 23 C4 A A 520 24.940 146.066 108.322 1.00 42.33 C
ATOM 24 P U A 521 23.722 140.686 112.396 1.00 38.98 P
ATOM 25 OP1 U A 521 22.400 140.397 111.789 1.00 39.63 O
ATOM 26 OP2 U A 521 23.845 141.731 113.437 1.00 37.76 O
ATOM 27 O5' U A 521 24.331 139.325 112.949 1.00 38.25 O
TER
ATOM 1 O3' A B 520 24.735 141.087 111.227 1.00 38.91 O
ATOM 2 P U B 521 23.722 140.686 112.396 1.00 38.98 P
ATOM 3 OP1 U B 521 22.400 140.397 111.789 1.00 39.63 O
ATOM 4 OP2 U B 521 23.845 141.731 113.437 1.00 37.76 O
ATOM 5 O5' U B 521 24.331 139.325 112.949 1.00 38.25 O
ATOM 6 C5' U B 521 24.667 138.257 112.044 1.00 37.03 C
ATOM 7 C4' U B 521 24.273 136.932 112.639 1.00 38.05 C
ATOM 8 O4' U B 521 25.158 136.650 113.757 1.00 39.32 O
ATOM 9 C3' U B 521 22.851 136.856 113.189 1.00 37.69 C
ATOM 10 O3' U B 521 22.356 135.529 113.068 1.00 39.00 O
ATOM 11 C2' U B 521 23.056 137.176 114.668 1.00 38.39 C
ATOM 12 O2' U B 521 22.055 136.619 115.494 1.00 38.84 O
ATOM 13 C1' U B 521 24.399 136.498 114.940 1.00 37.55 C
ATOM 14 N1 U B 521 25.161 137.083 116.053 1.00 36.40 N
ATOM 15 C2 U B 521 25.166 136.410 117.268 1.00 35.94 C
ATOM 16 O2 U B 521 24.550 135.371 117.461 1.00 37.32 O
ATOM 17 N3 U B 521 25.917 137.001 118.251 1.00 33.62 N
ATOM 18 C4 U B 521 26.644 138.170 118.150 1.00 35.95 C
ATOM 19 O4 U B 521 27.281 138.572 119.122 1.00 37.72 O
ATOM 20 C5 U B 521 26.578 138.808 116.872 1.00 35.45 C
ATOM 21 C6 U B 521 25.858 138.260 115.894 1.00 35.54 C
ATOM 22 P C B 522 21.569 135.087 111.741 1.00 42.46 P
ATOM 23 OP1 C B 522 20.987 136.309 111.125 1.00 43.21 O
ATOM 24 OP2 C B 522 20.690 133.921 112.041 1.00 38.56 O
ATOM 25 O5' C B 522 22.733 134.591 110.784 1.00 40.65 O
TER
ATOM 2 P A A 520 20.706 140.717 108.272 1.00 43.39 P
ATOM 3 OP1 A A 520 20.422 140.020 109.556 1.00 43.30 O
ATOM 4 OP2 A A 520 19.751 141.724 107.761 1.00 42.99 O
ATOM 5 O5' A A 520 22.147 141.390 108.359 1.00 42.44 O
ATOM 6 C5' A A 520 23.337 140.576 108.391 1.00 38.85 C
ATOM 7 C4' A A 520 24.513 141.384 108.874 1.00 38.33 C
ATOM 8 O4' A A 520 24.721 142.502 107.985 1.00 38.24 O
ATOM 9 C3' A A 520 24.348 142.023 110.239 1.00 38.11 C
ATOM 10 O3' A A 520 24.735 141.087 111.227 1.00 38.91 O
ATOM 11 C2' A A 520 25.337 143.182 110.185 1.00 38.50 C
ATOM 12 O2' A A 520 26.663 142.779 110.445 1.00 39.45 O
ATOM 13 C1' A A 520 25.256 143.589 108.714 1.00 38.69 C
ATOM 14 N9 A A 520 24.468 144.778 108.409 1.00 39.93 N
ATOM 15 C8 A A 520 23.139 144.848 108.098 1.00 39.91 C
ATOM 16 N7 A A 520 22.734 146.050 107.777 1.00 42.68 N
ATOM 17 C5 A A 520 23.869 146.830 107.903 1.00 41.96 C
ATOM 18 C6 A A 520 24.106 148.191 107.676 1.00 42.54 C
ATOM 19 N6 A A 520 23.176 149.035 107.228 1.00 44.27 N
ATOM 20 N1 A A 520 25.348 148.660 107.913 1.00 41.89 N
ATOM 21 C2 A A 520 26.287 147.805 108.334 1.00 41.72 C
ATOM 22 N3 A A 520 26.193 146.497 108.562 1.00 43.10 N
ATOM 23 C4 A A 520 24.940 146.066 108.322 1.00 42.33 C
ATOM 24 P U A 521 23.722 140.686 112.396 1.00 38.98 P
ATOM 25 OP1 U A 521 22.400 140.397 111.789 1.00 39.63 O
ATOM 26 OP2 U A 521 23.845 141.731 113.437 1.00 37.76 O
ATOM 27 O5' U A 521 24.331 139.325 112.949 1.00 38.25 O
TER
ATOM 1 O3' A B 520 24.735 141.087 111.227 1.00 38.91 O
ATOM 2 P U B 521 23.722 140.686 112.396 1.00 38.98 P
ATOM 3 OP1 U B 521 22.400 140.397 111.789 1.00 39.63 O
ATOM 4 OP2 U B 521 23.845 141.731 113.437 1.00 37.76 O
ATOM 5 O5' U B 521 24.331 139.325 112.949 1.00 38.25 O
ATOM 6 C5' U B 521 24.667 138.257 112.044 1.00 37.03 C
ATOM 7 C4' U B 521 24.273 136.932 112.639 1.00 38.05 C
ATOM 8 O4' U B 521 25.158 136.650 113.757 1.00 39.32 O
ATOM 9 C3' U B 521 22.851 136.856 113.189 1.00 37.69 C
ATOM 10 O3' U B 521 22.356 135.529 113.068 1.00 39.00 O
ATOM 11 C2' U B 521 23.056 137.176 114.668 1.00 38.39 C
ATOM 12 O2' U B 521 22.055 136.619 115.494 1.00 38.84 O
ATOM 13 C1' U B 521 24.399 136.498 114.940 1.00 37.55 C
ATOM 14 N1 U B 521 25.161 137.083 116.053 1.00 36.40 N
ATOM 15 C2 U B 521 25.166 136.410 117.268 1.00 35.94 C
ATOM 16 O2 U B 521 24.550 135.371 117.461 1.00 37.32 O
ATOM 17 N3 U B 521 25.917 137.001 118.251 1.00 33.62 N
ATOM 18 C4 U B 521 26.644 138.170 118.150 1.00 35.95 C
ATOM 19 O4 U B 521 27.281 138.572 119.122 1.00 37.72 O
ATOM 20 C5 U B 521 26.578 138.808 116.872 1.00 35.45 C
ATOM 21 C6 U B 521 25.858 138.260 115.894 1.00 35.54 C
ATOM 22 P C B 522 21.569 135.087 111.741 1.00 42.46 P
ATOM 23 OP1 C B 522 20.987 136.309 111.125 1.00 43.21 O
ATOM 24 OP2 C B 522 20.690 133.921 112.041 1.00 38.56 O
ATOM 25 O5' C B 522 22.733 134.591 110.784 1.00 40.65 O
TER
Atoms:
OP1: (20.422,140.020,109.556)
OP2: (19.751,141.724,107.761)
C3': (24.348,142.023,110.239)
C1': (25.256,143.589,108.714)
C5': (23.337,140.576,108.391)
O4': (24.721,142.502,107.985)
C8: (23.139,144.848,108.098)
O2': (26.663,142.779,110.445)
C6: (24.106,148.191,107.676)
C5: (23.869,146.830,107.903)
C4: (24.940,146.066,108.322)
P: (20.706,140.717,108.272)
C4': (24.513,141.384,108.874)
C2': (25.337,143.182,110.185)
C2: (26.287,147.805,108.334)
N1: (25.348,148.660,107.913)
N3: (26.193,146.497,108.562)
N6: (23.176,149.035,107.228)
N7: (22.734,146.050,107.777)
N9: (24.468,144.778,108.409)
O5': (22.147,141.390,108.359)
O3': (24.735,141.087,111.227)
OP2: (19.751,141.724,107.761)
C3': (24.348,142.023,110.239)
C1': (25.256,143.589,108.714)
C5': (23.337,140.576,108.391)
O4': (24.721,142.502,107.985)
C8: (23.139,144.848,108.098)
O2': (26.663,142.779,110.445)
C6: (24.106,148.191,107.676)
C5: (23.869,146.830,107.903)
C4: (24.940,146.066,108.322)
P: (20.706,140.717,108.272)
C4': (24.513,141.384,108.874)
C2': (25.337,143.182,110.185)
C2: (26.287,147.805,108.334)
N1: (25.348,148.660,107.913)
N3: (26.193,146.497,108.562)
N6: (23.176,149.035,107.228)
N7: (22.734,146.050,107.777)
N9: (24.468,144.778,108.409)
O5': (22.147,141.390,108.359)
O3': (24.735,141.087,111.227)
C4: (26.644,138.170,118.150)
N3: (25.917,137.001,118.251)
OP1: (22.400,140.397,111.789)
OP2: (23.845,141.731,113.437)
C2: (25.166,136.410,117.268)
C1': (24.399,136.498,114.940)
C3': (22.851,136.856,113.189)
O5': (24.331,139.325,112.949)
O4': (25.158,136.650,113.757)
C5': (24.667,138.257,112.044)
P: (23.722,140.686,112.396)
C4': (24.273,136.932,112.639)
C2': (23.056,137.176,114.668)
O2': (22.055,136.619,115.494)
N1: (25.161,137.083,116.053)
O4: (27.281,138.572,119.122)
O2: (24.550,135.371,117.461)
C6: (25.858,138.260,115.894)
C5: (26.578,138.808,116.872)
O3': (22.356,135.529,113.068)
N3: (25.917,137.001,118.251)
OP1: (22.400,140.397,111.789)
OP2: (23.845,141.731,113.437)
C2: (25.166,136.410,117.268)
C1': (24.399,136.498,114.940)
C3': (22.851,136.856,113.189)
O5': (24.331,139.325,112.949)
O4': (25.158,136.650,113.757)
C5': (24.667,138.257,112.044)
P: (23.722,140.686,112.396)
C4': (24.273,136.932,112.639)
C2': (23.056,137.176,114.668)
O2': (22.055,136.619,115.494)
N1: (25.161,137.083,116.053)
O4: (27.281,138.572,119.122)
O2: (24.550,135.371,117.461)
C6: (25.858,138.260,115.894)
C5: (26.578,138.808,116.872)
O3': (22.356,135.529,113.068)
Image (generated by PyMOL):