ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:0520:0521

Extra

PDB:
ATOM 1 O3' G A 519 21.138 139.367 107.017 1.00 42.25 O
ATOM 2 P A A 520 20.945 140.449 108.190 1.00 41.36 P
ATOM 3 OP1 A A 520 20.806 139.692 109.459 1.00 40.81 O
ATOM 4 OP2 A A 520 19.889 141.409 107.794 1.00 42.10 O
ATOM 5 O5' A A 520 22.343 141.201 108.217 1.00 39.06 O
ATOM 6 C5' A A 520 23.558 140.450 108.111 1.00 37.56 C
ATOM 7 C4' A A 520 24.708 141.243 108.650 1.00 36.76 C
ATOM 8 O4' A A 520 24.951 142.380 107.803 1.00 37.01 O
ATOM 9 C3' A A 520 24.493 141.831 110.028 1.00 36.53 C
ATOM 10 O3' A A 520 24.842 140.837 110.973 1.00 38.45 O
ATOM 11 C2' A A 520 25.490 142.982 110.044 1.00 36.88 C
ATOM 12 O2' A A 520 26.802 142.539 110.306 1.00 36.00 O
ATOM 13 C1' A A 520 25.456 143.440 108.584 1.00 38.41 C
ATOM 14 N9 A A 520 24.678 144.635 108.280 1.00 41.83 N
ATOM 15 C8 A A 520 23.353 144.720 107.939 1.00 42.51 C
ATOM 16 N7 A A 520 22.964 145.932 107.632 1.00 43.55 N
ATOM 17 C5 A A 520 24.103 146.699 107.801 1.00 43.28 C
ATOM 18 C6 A A 520 24.353 148.057 107.612 1.00 44.07 C
ATOM 19 N6 A A 520 23.438 148.917 107.166 1.00 45.98 N
ATOM 20 N1 A A 520 25.594 148.511 107.885 1.00 44.66 N
ATOM 21 C2 A A 520 26.519 147.641 108.302 1.00 44.27 C
ATOM 22 N3 A A 520 26.410 146.332 108.499 1.00 44.56 N
ATOM 23 C4 A A 520 25.161 145.918 108.226 1.00 43.80 C
ATOM 24 P U A 521 23.905 140.559 112.236 1.00 37.15 P
ATOM 25 OP1 U A 521 22.524 140.360 111.751 1.00 36.98 O
ATOM 26 OP2 U A 521 24.198 141.634 113.209 1.00 36.95 O
ATOM 27 O5' U A 521 24.452 139.178 112.810 1.00 34.84 O
TER

ATOM 1 O3' A B 520 24.842 140.837 110.973 1.00 38.45 O
ATOM 2 P U B 521 23.905 140.559 112.236 1.00 37.15 P
ATOM 3 OP1 U B 521 22.524 140.360 111.751 1.00 36.98 O
ATOM 4 OP2 U B 521 24.198 141.634 113.209 1.00 36.95 O
ATOM 5 O5' U B 521 24.452 139.178 112.810 1.00 34.84 O
ATOM 6 C5' U B 521 24.752 138.089 111.923 1.00 35.49 C
ATOM 7 C4' U B 521 24.363 136.776 112.555 1.00 37.50 C
ATOM 8 O4' U B 521 25.273 136.491 113.648 1.00 39.77 O
ATOM 9 C3' U B 521 22.955 136.702 113.140 1.00 38.09 C
ATOM 10 O3' U B 521 22.442 135.380 113.021 1.00 38.49 O
ATOM 11 C2' U B 521 23.194 137.013 114.613 1.00 37.83 C
ATOM 12 O2' U B 521 22.202 136.440 115.438 1.00 36.90 O
ATOM 13 C1' U B 521 24.546 136.340 114.851 1.00 37.38 C
ATOM 14 N1 U B 521 25.337 136.949 115.929 1.00 37.05 N
ATOM 15 C2 U B 521 25.372 136.313 117.159 1.00 36.35 C
ATOM 16 O2 U B 521 24.756 135.286 117.400 1.00 37.76 O
ATOM 17 N3 U B 521 26.155 136.929 118.102 1.00 35.67 N
ATOM 18 C4 U B 521 26.883 138.090 117.946 1.00 37.11 C
ATOM 19 O4 U B 521 27.533 138.529 118.893 1.00 39.01 O
ATOM 20 C5 U B 521 26.785 138.688 116.656 1.00 36.57 C
ATOM 21 C6 U B 521 26.035 138.115 115.717 1.00 36.45 C
ATOM 22 P C B 522 21.778 134.909 111.641 1.00 41.67 P
ATOM 23 OP1 C B 522 21.220 136.110 110.956 1.00 40.48 O
ATOM 24 OP2 C B 522 20.915 133.714 111.865 1.00 39.20 O
ATOM 25 O5' C B 522 23.027 134.452 110.781 1.00 40.58 O
TER

Atoms:
OP1: (20.806,139.692,109.459)
OP2: (19.889,141.409,107.794)
C3': (24.493,141.831,110.028)
C1': (25.456,143.440,108.584)
C5': (23.558,140.450,108.111)
O4': (24.951,142.380,107.803)
C8: (23.353,144.720,107.939)
O2': (26.802,142.539,110.306)
C6: (24.353,148.057,107.612)
C5: (24.103,146.699,107.801)
C4: (25.161,145.918,108.226)
P: (20.945,140.449,108.190)
C4': (24.708,141.243,108.650)
C2': (25.490,142.982,110.044)
C2: (26.519,147.641,108.302)
N1: (25.594,148.511,107.885)
N3: (26.410,146.332,108.499)
N6: (23.438,148.917,107.166)
N7: (22.964,145.932,107.632)
N9: (24.678,144.635,108.280)
O5': (22.343,141.201,108.217)
O3': (24.842,140.837,110.973)
C4: (26.883,138.090,117.946)
N3: (26.155,136.929,118.102)
OP1: (22.524,140.360,111.751)
OP2: (24.198,141.634,113.209)
C2: (25.372,136.313,117.159)
C1': (24.546,136.340,114.851)
C3': (22.955,136.702,113.140)
O5': (24.452,139.178,112.810)
O4': (25.273,136.491,113.648)
C5': (24.752,138.089,111.923)
P: (23.905,140.559,112.236)
C4': (24.363,136.776,112.555)
C2': (23.194,137.013,114.613)
O2': (22.202,136.440,115.438)
N1: (25.337,136.949,115.929)
O4: (27.533,138.529,118.893)
O2: (24.756,135.286,117.400)
C6: (26.035,138.115,115.717)
C5: (26.785,138.688,116.656)
O3': (22.442,135.380,113.021)
Image (generated by PyMOL):
PyMOL image
show in jmol