ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:0520:0521

Extra

PDB:
ATOM 1 O3' G A 519 21.091 139.689 107.514 1.00 51.77 O
ATOM 2 P A A 520 20.898 140.767 108.685 1.00 47.46 P
ATOM 3 OP1 A A 520 20.691 140.017 109.947 1.00 47.02 O
ATOM 4 OP2 A A 520 19.880 141.733 108.234 1.00 48.40 O
ATOM 5 O5' A A 520 22.310 141.492 108.756 1.00 46.37 O
ATOM 6 C5' A A 520 23.520 140.720 108.732 1.00 45.80 C
ATOM 7 C4' A A 520 24.684 141.550 109.198 1.00 45.33 C
ATOM 8 O4' A A 520 24.892 142.657 108.291 1.00 46.45 O
ATOM 9 C3' A A 520 24.504 142.205 110.551 1.00 44.91 C
ATOM 10 O3' A A 520 24.867 141.270 111.552 1.00 45.11 O
ATOM 11 C2' A A 520 25.492 143.367 110.487 1.00 46.15 C
ATOM 12 O2' A A 520 26.822 142.974 110.745 1.00 46.35 O
ATOM 13 C1' A A 520 25.419 143.754 109.010 1.00 47.05 C
ATOM 14 N9 A A 520 24.641 144.946 108.685 1.00 49.39 N
ATOM 15 C8 A A 520 23.331 145.025 108.287 1.00 50.28 C
ATOM 16 N7 A A 520 22.944 146.240 107.987 1.00 51.25 N
ATOM 17 C5 A A 520 24.068 147.015 108.216 1.00 50.77 C
ATOM 18 C6 A A 520 24.316 148.382 108.055 1.00 51.64 C
ATOM 19 N6 A A 520 23.414 149.243 107.584 1.00 51.34 N
ATOM 20 N1 A A 520 25.544 148.843 108.389 1.00 52.29 N
ATOM 21 C2 A A 520 26.455 147.974 108.840 1.00 51.38 C
ATOM 22 N3 A A 520 26.346 146.659 109.015 1.00 51.76 N
ATOM 23 C4 A A 520 25.113 146.237 108.677 1.00 51.14 C
ATOM 24 P U A 521 23.846 140.921 112.733 1.00 43.33 P
ATOM 25 OP1 U A 521 22.500 140.785 112.133 1.00 43.18 O
ATOM 26 OP2 U A 521 24.076 141.919 113.799 1.00 42.83 O
ATOM 27 O5' U A 521 24.344 139.497 113.242 1.00 40.91 O
TER

ATOM 1 O3' A B 520 24.867 141.270 111.552 1.00 45.11 O
ATOM 2 P U B 521 23.846 140.921 112.733 1.00 43.33 P
ATOM 3 OP1 U B 521 22.500 140.785 112.133 1.00 43.18 O
ATOM 4 OP2 U B 521 24.076 141.919 113.799 1.00 42.83 O
ATOM 5 O5' U B 521 24.344 139.497 113.242 1.00 40.91 O
ATOM 6 C5' U B 521 24.648 138.459 112.295 1.00 42.31 C
ATOM 7 C4' U B 521 24.335 137.109 112.882 1.00 44.58 C
ATOM 8 O4' U B 521 25.292 136.844 113.934 1.00 46.25 O
ATOM 9 C3' U B 521 22.951 136.965 113.513 1.00 46.33 C
ATOM 10 O3' U B 521 22.476 135.633 113.373 1.00 47.06 O
ATOM 11 C2' U B 521 23.227 137.249 114.982 1.00 46.42 C
ATOM 12 O2' U B 521 22.299 136.618 115.836 1.00 45.89 O
ATOM 13 C1' U B 521 24.609 136.628 115.151 1.00 46.01 C
ATOM 14 N1 U B 521 25.391 137.243 116.228 1.00 45.38 N
ATOM 15 C2 U B 521 25.435 136.587 117.437 1.00 45.63 C
ATOM 16 O2 U B 521 24.847 135.537 117.640 1.00 47.97 O
ATOM 17 N3 U B 521 26.190 137.201 118.402 1.00 44.47 N
ATOM 18 C4 U B 521 26.890 138.381 118.276 1.00 46.24 C
ATOM 19 O4 U B 521 27.577 138.786 119.217 1.00 48.21 O
ATOM 20 C5 U B 521 26.781 139.002 116.994 1.00 46.69 C
ATOM 21 C6 U B 521 26.055 138.426 116.039 1.00 45.43 C
ATOM 22 P C B 522 21.760 135.192 112.010 1.00 50.94 P
ATOM 23 OP1 C B 522 21.218 136.425 111.390 1.00 53.18 O
ATOM 24 OP2 C B 522 20.871 134.009 112.220 1.00 48.52 O
ATOM 25 O5' C B 522 22.971 134.755 111.085 1.00 52.56 O
TER

Atoms:
OP1: (20.691,140.017,109.947)
OP2: (19.880,141.733,108.234)
C3': (24.504,142.205,110.551)
C1': (25.419,143.754,109.010)
C5': (23.520,140.720,108.732)
O4': (24.892,142.657,108.291)
C8: (23.331,145.025,108.287)
O2': (26.822,142.974,110.745)
C6: (24.316,148.382,108.055)
C5: (24.068,147.015,108.216)
C4: (25.113,146.237,108.677)
P: (20.898,140.767,108.685)
C4': (24.684,141.550,109.198)
C2': (25.492,143.367,110.487)
C2: (26.455,147.974,108.840)
N1: (25.544,148.843,108.389)
N3: (26.346,146.659,109.015)
N6: (23.414,149.243,107.584)
N7: (22.944,146.240,107.987)
N9: (24.641,144.946,108.685)
O5': (22.310,141.492,108.756)
O3': (24.867,141.270,111.552)
C4: (26.890,138.381,118.276)
N3: (26.190,137.201,118.402)
OP1: (22.500,140.785,112.133)
OP2: (24.076,141.919,113.799)
C2: (25.435,136.587,117.437)
C1': (24.609,136.628,115.151)
C3': (22.951,136.965,113.513)
O5': (24.344,139.497,113.242)
O4': (25.292,136.844,113.934)
C5': (24.648,138.459,112.295)
P: (23.846,140.921,112.733)
C4': (24.335,137.109,112.882)
C2': (23.227,137.249,114.982)
O2': (22.299,136.618,115.836)
N1: (25.391,137.243,116.228)
O4: (27.577,138.786,119.217)
O2: (24.847,135.537,117.640)
C6: (26.055,138.426,116.039)
C5: (26.781,139.002,116.994)
O3': (22.476,135.633,113.373)
Image (generated by PyMOL):
PyMOL image
show in jmol