Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0520:0521
Extra
PDB:
ATOM 1 O3' G A 519 21.103 139.514 107.067 1.00 48.29 O
ATOM 2 P A A 520 20.837 140.590 108.231 1.00 48.08 P
ATOM 3 OP1 A A 520 20.566 139.828 109.476 1.00 47.60 O
ATOM 4 OP2 A A 520 19.836 141.556 107.740 1.00 48.86 O
ATOM 5 O5' A A 520 22.238 141.330 108.385 1.00 45.70 O
ATOM 6 C5' A A 520 23.460 140.572 108.341 1.00 45.03 C
ATOM 7 C4' A A 520 24.618 141.400 108.825 1.00 44.16 C
ATOM 8 O4' A A 520 24.820 142.515 107.938 1.00 45.07 O
ATOM 9 C3' A A 520 24.455 142.034 110.192 1.00 43.21 C
ATOM 10 O3' A A 520 24.843 141.096 111.177 1.00 42.97 O
ATOM 11 C2' A A 520 25.447 143.185 110.136 1.00 43.65 C
ATOM 12 O2' A A 520 26.767 142.752 110.372 1.00 43.87 O
ATOM 13 C1' A A 520 25.356 143.598 108.668 1.00 44.73 C
ATOM 14 N9 A A 520 24.569 144.789 108.368 1.00 45.86 N
ATOM 15 C8 A A 520 23.236 144.880 108.069 1.00 46.47 C
ATOM 16 N7 A A 520 22.846 146.091 107.761 1.00 46.37 N
ATOM 17 C5 A A 520 23.997 146.849 107.880 1.00 46.29 C
ATOM 18 C6 A A 520 24.255 148.205 107.666 1.00 47.05 C
ATOM 19 N6 A A 520 23.339 149.071 107.236 1.00 47.68 N
ATOM 20 N1 A A 520 25.507 148.650 107.899 1.00 47.39 N
ATOM 21 C2 A A 520 26.435 147.773 108.300 1.00 47.15 C
ATOM 22 N3 A A 520 26.320 146.468 108.514 1.00 46.60 N
ATOM 23 C4 A A 520 25.060 146.064 108.282 1.00 46.67 C
ATOM 24 P U A 521 23.808 140.655 112.307 1.00 42.57 P
ATOM 25 OP1 U A 521 22.504 140.380 111.667 1.00 43.08 O
ATOM 26 OP2 U A 521 23.901 141.681 113.362 1.00 44.29 O
ATOM 27 O5' U A 521 24.410 139.290 112.855 1.00 39.86 O
TER
ATOM 1 O3' A B 520 24.843 141.096 111.177 1.00 42.97 O
ATOM 2 P U B 521 23.808 140.655 112.307 1.00 42.57 P
ATOM 3 OP1 U B 521 22.504 140.380 111.667 1.00 43.08 O
ATOM 4 OP2 U B 521 23.901 141.681 113.362 1.00 44.29 O
ATOM 5 O5' U B 521 24.410 139.290 112.855 1.00 39.86 O
ATOM 6 C5' U B 521 24.676 138.209 111.959 1.00 39.76 C
ATOM 7 C4' U B 521 24.282 136.903 112.592 1.00 41.01 C
ATOM 8 O4' U B 521 25.186 136.626 113.689 1.00 43.85 O
ATOM 9 C3' U B 521 22.875 136.842 113.174 1.00 40.65 C
ATOM 10 O3' U B 521 22.385 135.515 113.069 1.00 41.32 O
ATOM 11 C2' U B 521 23.114 137.158 114.645 1.00 41.71 C
ATOM 12 O2' U B 521 22.125 136.612 115.487 1.00 39.84 O
ATOM 13 C1' U B 521 24.446 136.455 114.882 1.00 43.14 C
ATOM 14 N1 U B 521 25.232 137.003 115.997 1.00 43.99 N
ATOM 15 C2 U B 521 25.211 136.321 117.201 1.00 44.89 C
ATOM 16 O2 U B 521 24.568 135.293 117.377 1.00 46.21 O
ATOM 17 N3 U B 521 25.974 136.883 118.193 1.00 44.58 N
ATOM 18 C4 U B 521 26.739 138.026 118.102 1.00 45.56 C
ATOM 19 O4 U B 521 27.387 138.403 119.078 1.00 47.18 O
ATOM 20 C5 U B 521 26.704 138.668 116.830 1.00 45.57 C
ATOM 21 C6 U B 521 25.970 138.152 115.847 1.00 44.54 C
ATOM 22 P C B 522 21.679 135.038 111.716 1.00 44.15 P
ATOM 23 OP1 C B 522 21.108 136.246 111.067 1.00 46.25 O
ATOM 24 OP2 C B 522 20.811 133.856 111.975 1.00 42.56 O
ATOM 25 O5' C B 522 22.900 134.577 110.816 1.00 44.53 O
TER
ATOM 2 P A A 520 20.837 140.590 108.231 1.00 48.08 P
ATOM 3 OP1 A A 520 20.566 139.828 109.476 1.00 47.60 O
ATOM 4 OP2 A A 520 19.836 141.556 107.740 1.00 48.86 O
ATOM 5 O5' A A 520 22.238 141.330 108.385 1.00 45.70 O
ATOM 6 C5' A A 520 23.460 140.572 108.341 1.00 45.03 C
ATOM 7 C4' A A 520 24.618 141.400 108.825 1.00 44.16 C
ATOM 8 O4' A A 520 24.820 142.515 107.938 1.00 45.07 O
ATOM 9 C3' A A 520 24.455 142.034 110.192 1.00 43.21 C
ATOM 10 O3' A A 520 24.843 141.096 111.177 1.00 42.97 O
ATOM 11 C2' A A 520 25.447 143.185 110.136 1.00 43.65 C
ATOM 12 O2' A A 520 26.767 142.752 110.372 1.00 43.87 O
ATOM 13 C1' A A 520 25.356 143.598 108.668 1.00 44.73 C
ATOM 14 N9 A A 520 24.569 144.789 108.368 1.00 45.86 N
ATOM 15 C8 A A 520 23.236 144.880 108.069 1.00 46.47 C
ATOM 16 N7 A A 520 22.846 146.091 107.761 1.00 46.37 N
ATOM 17 C5 A A 520 23.997 146.849 107.880 1.00 46.29 C
ATOM 18 C6 A A 520 24.255 148.205 107.666 1.00 47.05 C
ATOM 19 N6 A A 520 23.339 149.071 107.236 1.00 47.68 N
ATOM 20 N1 A A 520 25.507 148.650 107.899 1.00 47.39 N
ATOM 21 C2 A A 520 26.435 147.773 108.300 1.00 47.15 C
ATOM 22 N3 A A 520 26.320 146.468 108.514 1.00 46.60 N
ATOM 23 C4 A A 520 25.060 146.064 108.282 1.00 46.67 C
ATOM 24 P U A 521 23.808 140.655 112.307 1.00 42.57 P
ATOM 25 OP1 U A 521 22.504 140.380 111.667 1.00 43.08 O
ATOM 26 OP2 U A 521 23.901 141.681 113.362 1.00 44.29 O
ATOM 27 O5' U A 521 24.410 139.290 112.855 1.00 39.86 O
TER
ATOM 1 O3' A B 520 24.843 141.096 111.177 1.00 42.97 O
ATOM 2 P U B 521 23.808 140.655 112.307 1.00 42.57 P
ATOM 3 OP1 U B 521 22.504 140.380 111.667 1.00 43.08 O
ATOM 4 OP2 U B 521 23.901 141.681 113.362 1.00 44.29 O
ATOM 5 O5' U B 521 24.410 139.290 112.855 1.00 39.86 O
ATOM 6 C5' U B 521 24.676 138.209 111.959 1.00 39.76 C
ATOM 7 C4' U B 521 24.282 136.903 112.592 1.00 41.01 C
ATOM 8 O4' U B 521 25.186 136.626 113.689 1.00 43.85 O
ATOM 9 C3' U B 521 22.875 136.842 113.174 1.00 40.65 C
ATOM 10 O3' U B 521 22.385 135.515 113.069 1.00 41.32 O
ATOM 11 C2' U B 521 23.114 137.158 114.645 1.00 41.71 C
ATOM 12 O2' U B 521 22.125 136.612 115.487 1.00 39.84 O
ATOM 13 C1' U B 521 24.446 136.455 114.882 1.00 43.14 C
ATOM 14 N1 U B 521 25.232 137.003 115.997 1.00 43.99 N
ATOM 15 C2 U B 521 25.211 136.321 117.201 1.00 44.89 C
ATOM 16 O2 U B 521 24.568 135.293 117.377 1.00 46.21 O
ATOM 17 N3 U B 521 25.974 136.883 118.193 1.00 44.58 N
ATOM 18 C4 U B 521 26.739 138.026 118.102 1.00 45.56 C
ATOM 19 O4 U B 521 27.387 138.403 119.078 1.00 47.18 O
ATOM 20 C5 U B 521 26.704 138.668 116.830 1.00 45.57 C
ATOM 21 C6 U B 521 25.970 138.152 115.847 1.00 44.54 C
ATOM 22 P C B 522 21.679 135.038 111.716 1.00 44.15 P
ATOM 23 OP1 C B 522 21.108 136.246 111.067 1.00 46.25 O
ATOM 24 OP2 C B 522 20.811 133.856 111.975 1.00 42.56 O
ATOM 25 O5' C B 522 22.900 134.577 110.816 1.00 44.53 O
TER
Atoms:
OP1: (20.566,139.828,109.476)
OP2: (19.836,141.556,107.740)
C3': (24.455,142.034,110.192)
C1': (25.356,143.598,108.668)
C5': (23.460,140.572,108.341)
O4': (24.820,142.515,107.938)
C8: (23.236,144.880,108.069)
O2': (26.767,142.752,110.372)
C6: (24.255,148.205,107.666)
C5: (23.997,146.849,107.880)
C4: (25.060,146.064,108.282)
P: (20.837,140.590,108.231)
C4': (24.618,141.400,108.825)
C2': (25.447,143.185,110.136)
C2: (26.435,147.773,108.300)
N1: (25.507,148.650,107.899)
N3: (26.320,146.468,108.514)
N6: (23.339,149.071,107.236)
N7: (22.846,146.091,107.761)
N9: (24.569,144.789,108.368)
O5': (22.238,141.330,108.385)
O3': (24.843,141.096,111.177)
OP2: (19.836,141.556,107.740)
C3': (24.455,142.034,110.192)
C1': (25.356,143.598,108.668)
C5': (23.460,140.572,108.341)
O4': (24.820,142.515,107.938)
C8: (23.236,144.880,108.069)
O2': (26.767,142.752,110.372)
C6: (24.255,148.205,107.666)
C5: (23.997,146.849,107.880)
C4: (25.060,146.064,108.282)
P: (20.837,140.590,108.231)
C4': (24.618,141.400,108.825)
C2': (25.447,143.185,110.136)
C2: (26.435,147.773,108.300)
N1: (25.507,148.650,107.899)
N3: (26.320,146.468,108.514)
N6: (23.339,149.071,107.236)
N7: (22.846,146.091,107.761)
N9: (24.569,144.789,108.368)
O5': (22.238,141.330,108.385)
O3': (24.843,141.096,111.177)
C4: (26.739,138.026,118.102)
N3: (25.974,136.883,118.193)
OP1: (22.504,140.380,111.667)
OP2: (23.901,141.681,113.362)
C2: (25.211,136.321,117.201)
C1': (24.446,136.455,114.882)
C3': (22.875,136.842,113.174)
O5': (24.410,139.290,112.855)
O4': (25.186,136.626,113.689)
C5': (24.676,138.209,111.959)
P: (23.808,140.655,112.307)
C4': (24.282,136.903,112.592)
C2': (23.114,137.158,114.645)
O2': (22.125,136.612,115.487)
N1: (25.232,137.003,115.997)
O4: (27.387,138.403,119.078)
O2: (24.568,135.293,117.377)
C6: (25.970,138.152,115.847)
C5: (26.704,138.668,116.830)
O3': (22.385,135.515,113.069)
N3: (25.974,136.883,118.193)
OP1: (22.504,140.380,111.667)
OP2: (23.901,141.681,113.362)
C2: (25.211,136.321,117.201)
C1': (24.446,136.455,114.882)
C3': (22.875,136.842,113.174)
O5': (24.410,139.290,112.855)
O4': (25.186,136.626,113.689)
C5': (24.676,138.209,111.959)
P: (23.808,140.655,112.307)
C4': (24.282,136.903,112.592)
C2': (23.114,137.158,114.645)
O2': (22.125,136.612,115.487)
N1: (25.232,137.003,115.997)
O4: (27.387,138.403,119.078)
O2: (24.568,135.293,117.377)
C6: (25.970,138.152,115.847)
C5: (26.704,138.668,116.830)
O3': (22.385,135.515,113.069)
Image (generated by PyMOL):