ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:0520:0521

Extra

PDB:
ATOM 1 O3' G A 519 21.038 139.337 107.067 1.00 42.87 O
ATOM 2 P A A 520 20.777 140.451 108.202 1.00 41.74 P
ATOM 3 OP1 A A 520 20.443 139.741 109.464 1.00 39.76 O
ATOM 4 OP2 A A 520 19.819 141.432 107.642 1.00 42.19 O
ATOM 5 O5' A A 520 22.197 141.156 108.377 1.00 39.39 O
ATOM 6 C5' A A 520 23.403 140.364 108.393 1.00 37.21 C
ATOM 7 C4' A A 520 24.573 141.177 108.888 1.00 35.30 C
ATOM 8 O4' A A 520 24.840 142.257 107.971 1.00 35.51 O
ATOM 9 C3' A A 520 24.396 141.841 110.238 1.00 34.94 C
ATOM 10 O3' A A 520 24.779 140.926 111.249 1.00 35.60 O
ATOM 11 C2' A A 520 25.385 142.996 110.169 1.00 35.39 C
ATOM 12 O2' A A 520 26.698 142.573 110.443 1.00 35.53 O
ATOM 13 C1' A A 520 25.316 143.375 108.690 1.00 36.04 C
ATOM 14 N9 A A 520 24.466 144.511 108.356 1.00 39.10 N
ATOM 15 C8 A A 520 23.137 144.499 108.010 1.00 40.46 C
ATOM 16 N7 A A 520 22.672 145.673 107.665 1.00 41.68 N
ATOM 17 C5 A A 520 23.762 146.518 107.811 1.00 41.72 C
ATOM 18 C6 A A 520 23.931 147.887 107.571 1.00 41.78 C
ATOM 19 N6 A A 520 22.970 148.674 107.080 1.00 43.04 N
ATOM 20 N1 A A 520 25.140 148.426 107.837 1.00 41.74 N
ATOM 21 C2 A A 520 26.112 147.628 108.292 1.00 41.97 C
ATOM 22 N3 A A 520 26.084 146.321 108.533 1.00 42.72 N
ATOM 23 C4 A A 520 24.865 145.819 108.268 1.00 41.80 C
ATOM 24 P U A 521 23.694 140.383 112.289 1.00 36.91 P
ATOM 25 OP1 U A 521 22.479 140.004 111.541 1.00 37.60 O
ATOM 26 OP2 U A 521 23.605 141.395 113.368 1.00 38.29 O
ATOM 27 O5' U A 521 24.359 139.062 112.876 1.00 35.04 O
TER

ATOM 1 O3' A B 520 24.779 140.926 111.249 1.00 35.60 O
ATOM 2 P U B 521 23.694 140.383 112.289 1.00 36.91 P
ATOM 3 OP1 U B 521 22.479 140.004 111.541 1.00 37.60 O
ATOM 4 OP2 U B 521 23.605 141.395 113.368 1.00 38.29 O
ATOM 5 O5' U B 521 24.359 139.062 112.876 1.00 35.04 O
ATOM 6 C5' U B 521 24.658 137.961 112.015 1.00 36.18 C
ATOM 7 C4' U B 521 24.216 136.666 112.648 1.00 39.08 C
ATOM 8 O4' U B 521 25.080 136.382 113.776 1.00 41.12 O
ATOM 9 C3' U B 521 22.784 136.622 113.184 1.00 38.98 C
ATOM 10 O3' U B 521 22.271 135.295 113.078 1.00 38.58 O
ATOM 11 C2' U B 521 22.977 136.955 114.659 1.00 39.74 C
ATOM 12 O2' U B 521 21.946 136.420 115.462 1.00 39.04 O
ATOM 13 C1' U B 521 24.302 136.252 114.950 1.00 40.75 C
ATOM 14 N1 U B 521 25.078 136.805 116.069 1.00 40.84 N
ATOM 15 C2 U B 521 25.038 136.137 117.278 1.00 41.95 C
ATOM 16 O2 U B 521 24.350 135.147 117.472 1.00 43.43 O
ATOM 17 N3 U B 521 25.834 136.673 118.259 1.00 42.67 N
ATOM 18 C4 U B 521 26.641 137.786 118.159 1.00 43.26 C
ATOM 19 O4 U B 521 27.363 138.098 119.105 1.00 45.36 O
ATOM 20 C5 U B 521 26.601 138.435 116.890 1.00 43.15 C
ATOM 21 C6 U B 521 25.839 137.937 115.914 1.00 41.67 C
ATOM 22 P C B 522 21.499 134.839 111.744 1.00 40.55 P
ATOM 23 OP1 C B 522 20.939 136.061 111.105 1.00 41.95 O
ATOM 24 OP2 C B 522 20.604 133.679 112.024 1.00 39.28 O
ATOM 25 O5' C B 522 22.670 134.331 110.802 1.00 39.42 O
TER

Atoms:
OP1: (20.443,139.741,109.464)
OP2: (19.819,141.432,107.642)
C3': (24.396,141.841,110.238)
C1': (25.316,143.375,108.690)
C5': (23.403,140.364,108.393)
O4': (24.840,142.257,107.971)
C8: (23.137,144.499,108.010)
O2': (26.698,142.573,110.443)
C6: (23.931,147.887,107.571)
C5: (23.762,146.518,107.811)
C4: (24.865,145.819,108.268)
P: (20.777,140.451,108.202)
C4': (24.573,141.177,108.888)
C2': (25.385,142.996,110.169)
C2: (26.112,147.628,108.292)
N1: (25.140,148.426,107.837)
N3: (26.084,146.321,108.533)
N6: (22.970,148.674,107.080)
N7: (22.672,145.673,107.665)
N9: (24.466,144.511,108.356)
O5': (22.197,141.156,108.377)
O3': (24.779,140.926,111.249)
C4: (26.641,137.786,118.159)
N3: (25.834,136.673,118.259)
OP1: (22.479,140.004,111.541)
OP2: (23.605,141.395,113.368)
C2: (25.038,136.137,117.278)
C1': (24.302,136.252,114.950)
C3': (22.784,136.622,113.184)
O5': (24.359,139.062,112.876)
O4': (25.080,136.382,113.776)
C5': (24.658,137.961,112.015)
P: (23.694,140.383,112.289)
C4': (24.216,136.666,112.648)
C2': (22.977,136.955,114.659)
O2': (21.946,136.420,115.462)
N1: (25.078,136.805,116.069)
O4: (27.363,138.098,119.105)
O2: (24.350,135.147,117.472)
C6: (25.839,137.937,115.914)
C5: (26.601,138.435,116.890)
O3': (22.271,135.295,113.078)
Image (generated by PyMOL):
PyMOL image
show in jmol