ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHZ:A712:A733

Extra

PDB:
ATOM 1 O3' U A 711 40.242 -13.630 9.201 1.00 65.34 O
ATOM 2 P G A 712 39.472 -12.274 9.567 1.00 65.53 P
ATOM 3 OP1 G A 712 40.425 -11.403 10.295 1.00 74.43 O
ATOM 4 OP2 G A 712 38.199 -12.662 10.231 1.00 71.20 O
ATOM 5 O5' G A 712 39.178 -11.657 8.142 1.00 63.64 O
ATOM 6 C5' G A 712 40.236 -11.230 7.298 1.00 50.78 C
ATOM 7 C4' G A 712 39.736 -10.874 5.929 1.00 53.76 C
ATOM 8 O4' G A 712 38.869 -11.946 5.433 1.00 64.21 O
ATOM 9 C3' G A 712 38.905 -9.606 5.869 1.00 56.83 C
ATOM 10 O3' G A 712 39.103 -8.997 4.603 1.00 53.97 O
ATOM 11 C2' G A 712 37.474 -10.154 5.972 1.00 62.67 C
ATOM 12 O2' G A 712 36.456 -9.295 5.502 1.00 67.74 O
ATOM 13 C1' G A 712 37.586 -11.417 5.137 1.00 59.72 C
ATOM 14 N9 G A 712 36.558 -12.424 5.435 1.00 60.76 N
ATOM 15 C8 G A 712 36.075 -12.861 6.644 1.00 63.57 C
ATOM 16 N7 G A 712 35.124 -13.756 6.529 1.00 71.12 N
ATOM 17 C5 G A 712 34.944 -13.906 5.149 1.00 71.67 C
ATOM 18 C6 G A 712 34.052 -14.711 4.370 1.00 68.74 C
ATOM 19 O6 G A 712 33.184 -15.519 4.714 1.00 74.94 O
ATOM 20 N1 G A 712 34.227 -14.527 3.014 1.00 68.25 N
ATOM 21 C2 G A 712 35.145 -13.674 2.461 1.00 71.56 C
ATOM 22 N2 G A 712 35.201 -13.623 1.123 1.00 72.31 N
ATOM 23 N3 G A 712 35.964 -12.917 3.160 1.00 72.89 N
ATOM 24 C4 G A 712 35.817 -13.079 4.483 1.00 68.82 C
ATOM 25 P A A 713 38.917 -7.420 4.436 1.00 55.80 P
ATOM 26 OP1 A A 713 39.609 -6.779 5.561 1.00 52.11 O
ATOM 27 OP2 A A 713 37.444 -7.170 4.244 1.00 55.92 O
ATOM 28 O5' A A 713 39.690 -7.119 3.091 1.00 56.37 O
TER

ATOM 1 O3' U B 732 25.874 -7.359 3.561 1.00 75.03 O
ATOM 2 P G B 733 26.332 -8.814 3.063 1.00 75.88 P
ATOM 3 OP1 G B 733 25.161 -9.448 2.402 1.00 78.02 O
ATOM 4 OP2 G B 733 26.951 -9.499 4.226 1.00 78.29 O
ATOM 5 O5' G B 733 27.448 -8.477 1.987 1.00 64.63 O
ATOM 6 C5' G B 733 27.110 -8.049 0.681 1.00 59.46 C
ATOM 7 C4' G B 733 28.342 -7.650 -0.081 1.00 65.16 C
ATOM 8 O4' G B 733 29.137 -6.764 0.745 1.00 68.82 O
ATOM 9 C3' G B 733 29.280 -8.795 -0.472 1.00 65.72 C
ATOM 10 O3' G B 733 28.948 -9.355 -1.746 1.00 72.44 O
ATOM 11 C2' G B 733 30.671 -8.153 -0.440 1.00 64.52 C
ATOM 12 O2' G B 733 30.978 -7.551 -1.695 1.00 61.61 O
ATOM 13 C1' G B 733 30.507 -7.043 0.609 1.00 68.97 C
ATOM 14 N9 G B 733 31.031 -7.415 1.942 1.00 70.68 N
ATOM 15 C8 G B 733 30.260 -7.956 2.932 1.00 68.28 C
ATOM 16 N7 G B 733 30.911 -8.174 4.037 1.00 65.89 N
ATOM 17 C5 G B 733 32.189 -7.730 3.792 1.00 60.44 C
ATOM 18 C6 G B 733 33.307 -7.730 4.661 1.00 72.76 C
ATOM 19 O6 G B 733 33.381 -8.139 5.841 1.00 73.23 O
ATOM 20 N1 G B 733 34.409 -7.193 4.007 1.00 72.87 N
ATOM 21 C2 G B 733 34.421 -6.731 2.717 1.00 66.54 C
ATOM 22 N2 G B 733 35.591 -6.256 2.292 1.00 70.29 N
ATOM 23 N3 G B 733 33.386 -6.726 1.902 1.00 64.28 N
ATOM 24 C4 G B 733 32.292 -7.238 2.504 1.00 69.31 C
ATOM 25 P G B 734 28.536 -10.906 -1.902 1.00 57.03 P
ATOM 26 OP1 G B 734 27.470 -10.977 -2.915 1.00 62.71 O
ATOM 27 OP2 G B 734 28.274 -11.435 -0.546 1.00 60.77 O
ATOM 28 O5' G B 734 29.851 -11.549 -2.485 1.00 67.35 O
TER

Atoms:
OP1: (40.425,-11.403,10.295)
OP2: (38.199,-12.662,10.231)
C3': (38.905,-9.606,5.869)
C1': (37.586,-11.417,5.137)
C5': (40.236,-11.230,7.298)
O6: (33.184,-15.519,4.714)
O4': (38.869,-11.946,5.433)
C8: (36.075,-12.861,6.644)
C2: (35.145,-13.674,2.461)
C6: (34.052,-14.711,4.370)
C5: (34.944,-13.906,5.149)
C4: (35.817,-13.079,4.483)
P: (39.472,-12.274,9.567)
C4': (39.736,-10.874,5.929)
C2': (37.474,-10.154,5.972)
O2': (36.456,-9.295,5.502)
N1: (34.227,-14.527,3.014)
N2: (35.201,-13.623,1.123)
N3: (35.964,-12.917,3.160)
N7: (35.124,-13.756,6.529)
N9: (36.558,-12.424,5.435)
O5': (39.178,-11.657,8.142)
O3': (39.103,-8.997,4.603)
OP1: (25.161,-9.448,2.402)
OP2: (26.951,-9.499,4.226)
C3': (29.280,-8.795,-0.472)
C1': (30.507,-7.043,0.609)
C5': (27.110,-8.049,0.681)
O6: (33.381,-8.139,5.841)
O4': (29.137,-6.764,0.745)
C8: (30.260,-7.956,2.932)
C2: (34.421,-6.731,2.717)
C6: (33.307,-7.730,4.661)
C5: (32.189,-7.730,3.792)
C4: (32.292,-7.238,2.504)
P: (26.332,-8.814,3.063)
C4': (28.342,-7.650,-0.081)
C2': (30.671,-8.153,-0.440)
O2': (30.978,-7.551,-1.695)
N1: (34.409,-7.193,4.007)
N2: (35.591,-6.256,2.292)
N3: (33.386,-6.726,1.902)
N7: (30.911,-8.174,4.037)
N9: (31.031,-7.415,1.942)
O5': (27.448,-8.477,1.987)
O3': (28.948,-9.355,-1.746)
Image (generated by PyMOL):
PyMOL image
show in jmol