ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CD6:0520:0521

Extra

PDB:
ATOM 1 O3' G A 519 20.977 139.546 107.487 1.00 44.06 O
ATOM 2 P A A 520 20.893 140.650 108.657 1.00 42.03 P
ATOM 3 OP1 A A 520 20.816 139.892 109.931 1.00 45.06 O
ATOM 4 OP2 A A 520 19.859 141.661 108.361 1.00 41.63 O
ATOM 5 O5' A A 520 22.322 141.343 108.597 1.00 42.60 O
ATOM 6 C5' A A 520 23.526 140.550 108.637 1.00 39.95 C
ATOM 7 C4' A A 520 24.679 141.387 109.121 1.00 39.61 C
ATOM 8 O4' A A 520 24.831 142.509 108.231 1.00 41.31 O
ATOM 9 C3' A A 520 24.485 142.029 110.482 1.00 40.11 C
ATOM 10 O3' A A 520 24.916 141.111 111.477 1.00 41.58 O
ATOM 11 C2' A A 520 25.432 143.222 110.426 1.00 40.84 C
ATOM 12 O2' A A 520 26.762 142.865 110.731 1.00 42.43 O
ATOM 13 C1' A A 520 25.383 143.593 108.943 1.00 41.90 C
ATOM 14 N9 A A 520 24.646 144.800 108.590 1.00 43.71 N
ATOM 15 C8 A A 520 23.340 144.898 108.211 1.00 44.62 C
ATOM 16 N7 A A 520 22.970 146.114 107.900 1.00 46.32 N
ATOM 17 C5 A A 520 24.110 146.869 108.101 1.00 44.60 C
ATOM 18 C6 A A 520 24.372 148.227 107.938 1.00 44.25 C
ATOM 19 N6 A A 520 23.471 149.103 107.494 1.00 46.45 N
ATOM 20 N1 A A 520 25.608 148.666 108.239 1.00 44.13 N
ATOM 21 C2 A A 520 26.515 147.784 108.660 1.00 44.46 C
ATOM 22 N3 A A 520 26.393 146.478 108.840 1.00 45.13 N
ATOM 23 C4 A A 520 25.147 146.077 108.540 1.00 45.00 C
ATOM 24 P U A 521 23.950 140.719 112.694 1.00 41.11 P
ATOM 25 OP1 U A 521 22.640 140.364 112.126 1.00 40.51 O
ATOM 26 OP2 U A 521 24.052 141.777 113.727 1.00 40.77 O
ATOM 27 O5' U A 521 24.583 139.369 113.247 1.00 39.39 O
TER

ATOM 1 O3' A B 520 24.916 141.111 111.477 1.00 41.58 O
ATOM 2 P U B 521 23.950 140.719 112.694 1.00 41.11 P
ATOM 3 OP1 U B 521 22.640 140.364 112.126 1.00 40.51 O
ATOM 4 OP2 U B 521 24.052 141.777 113.727 1.00 40.77 O
ATOM 5 O5' U B 521 24.583 139.369 113.247 1.00 39.39 O
ATOM 6 C5' U B 521 24.820 138.266 112.356 1.00 38.96 C
ATOM 7 C4' U B 521 24.390 136.973 112.995 1.00 39.63 C
ATOM 8 O4' U B 521 25.286 136.674 114.096 1.00 41.33 O
ATOM 9 C3' U B 521 22.979 136.955 113.575 1.00 40.04 C
ATOM 10 O3' U B 521 22.428 135.646 113.445 1.00 39.26 O
ATOM 11 C2' U B 521 23.228 137.280 115.044 1.00 39.76 C
ATOM 12 O2' U B 521 22.231 136.797 115.915 1.00 39.23 O
ATOM 13 C1' U B 521 24.545 136.551 115.291 1.00 40.12 C
ATOM 14 N1 U B 521 25.341 137.119 116.387 1.00 40.98 N
ATOM 15 C2 U B 521 25.328 136.459 117.595 1.00 41.24 C
ATOM 16 O2 U B 521 24.689 135.437 117.785 1.00 42.17 O
ATOM 17 N3 U B 521 26.095 137.038 118.576 1.00 40.50 N
ATOM 18 C4 U B 521 26.852 138.182 118.468 1.00 40.58 C
ATOM 19 O4 U B 521 27.454 138.605 119.453 1.00 42.69 O
ATOM 20 C5 U B 521 26.814 138.802 117.188 1.00 41.34 C
ATOM 21 C6 U B 521 26.077 138.267 116.216 1.00 41.57 C
ATOM 22 P C B 522 21.781 135.194 112.046 1.00 40.11 P
ATOM 23 OP1 C B 522 21.254 136.409 111.367 1.00 39.22 O
ATOM 24 OP2 C B 522 20.883 134.030 112.270 1.00 41.16 O
ATOM 25 O5' C B 522 23.026 134.697 111.196 1.00 36.93 O
TER

Atoms:
OP1: (20.816,139.892,109.931)
OP2: (19.859,141.661,108.361)
C3': (24.485,142.029,110.482)
C1': (25.383,143.593,108.943)
C5': (23.526,140.550,108.637)
O4': (24.831,142.509,108.231)
C8: (23.340,144.898,108.211)
O2': (26.762,142.865,110.731)
C6: (24.372,148.227,107.938)
C5: (24.110,146.869,108.101)
C4: (25.147,146.077,108.540)
P: (20.893,140.650,108.657)
C4': (24.679,141.387,109.121)
C2': (25.432,143.222,110.426)
C2: (26.515,147.784,108.660)
N1: (25.608,148.666,108.239)
N3: (26.393,146.478,108.840)
N6: (23.471,149.103,107.494)
N7: (22.970,146.114,107.900)
N9: (24.646,144.800,108.590)
O5': (22.322,141.343,108.597)
O3': (24.916,141.111,111.477)
C4: (26.852,138.182,118.468)
N3: (26.095,137.038,118.576)
OP1: (22.640,140.364,112.126)
OP2: (24.052,141.777,113.727)
C2: (25.328,136.459,117.595)
C1': (24.545,136.551,115.291)
C3': (22.979,136.955,113.575)
O5': (24.583,139.369,113.247)
O4': (25.286,136.674,114.096)
C5': (24.820,138.266,112.356)
P: (23.950,140.719,112.694)
C4': (24.390,136.973,112.995)
C2': (23.228,137.280,115.044)
O2': (22.231,136.797,115.915)
N1: (25.341,137.119,116.387)
O4: (27.454,138.605,119.453)
O2: (24.689,135.437,117.785)
C6: (26.077,138.267,116.216)
C5: (26.814,138.802,117.188)
O3': (22.428,135.646,113.445)
Image (generated by PyMOL):
PyMOL image
show in jmol