Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A25:A511
Extra
PDB:
ATOM 1 O3' U A 24 -44.028 -90.597 16.802 1.00 0.01 O
ATOM 2 P G A 25 -43.516 -90.129 18.239 1.00 0.01 P
ATOM 3 OP1 G A 25 -42.963 -88.807 18.084 1.00 0.01 O
ATOM 4 OP2 G A 25 -42.668 -91.183 18.770 1.00 0.01 O
ATOM 5 O5' G A 25 -44.841 -90.049 19.063 1.00 0.01 O
ATOM 6 C5' G A 25 -45.743 -88.989 18.865 1.00 0.01 C
ATOM 7 C4' G A 25 -47.091 -89.349 19.375 1.00 0.01 C
ATOM 8 O4' G A 25 -47.483 -90.603 18.804 1.00 0.01 O
ATOM 9 C3' G A 25 -47.178 -89.584 20.856 1.00 0.01 C
ATOM 10 O3' G A 25 -47.348 -88.394 21.565 1.00 0.01 O
ATOM 11 C2' G A 25 -48.371 -90.489 20.964 1.00 0.01 C
ATOM 12 O2' G A 25 -49.551 -89.732 20.807 1.00 0.01 O
ATOM 13 C1' G A 25 -48.203 -91.351 19.737 1.00 0.01 C
ATOM 14 N9 G A 25 -47.458 -92.575 20.010 1.00 0.01 N
ATOM 15 C8 G A 25 -46.118 -92.689 19.976 1.00 0.01 C
ATOM 16 N7 G A 25 -45.718 -93.889 20.208 1.00 0.01 N
ATOM 17 C5 G A 25 -46.877 -94.602 20.374 1.00 0.01 C
ATOM 18 C6 G A 25 -47.080 -95.961 20.657 1.00 0.01 C
ATOM 19 O6 G A 25 -46.260 -96.859 20.811 1.00 0.01 O
ATOM 20 N1 G A 25 -48.398 -96.297 20.777 1.00 0.01 N
ATOM 21 C2 G A 25 -49.410 -95.443 20.600 1.00 0.01 C
ATOM 22 N2 G A 25 -50.608 -95.997 20.745 1.00 0.01 N
ATOM 23 N3 G A 25 -49.248 -94.165 20.330 1.00 0.01 N
ATOM 24 C4 G A 25 -47.962 -93.812 20.237 1.00 0.01 C
ATOM 25 P G A 26 -46.586 -88.161 22.926 1.00 0.01 P
ATOM 26 OP1 G A 26 -46.499 -86.707 23.125 1.00 0.01 O
ATOM 27 OP2 G A 26 -45.353 -88.917 22.870 1.00 0.01 O
ATOM 28 O5' G A 26 -47.549 -88.821 23.981 1.00 0.01 O
TER
ATOM 1 O3' U B 510 -48.340-103.428 28.529 1.00 0.01 O
ATOM 2 P G B 511 -48.016-103.900 27.020 1.00 0.01 P
ATOM 3 OP1 G B 511 -48.954-104.970 26.688 1.00 0.01 O
ATOM 4 OP2 G B 511 -46.605-104.195 26.945 1.00 0.01 O
ATOM 5 O5' G B 511 -48.330-102.603 26.158 1.00 0.01 O
ATOM 6 C5' G B 511 -49.544-101.904 26.324 1.00 0.01 C
ATOM 7 C4' G B 511 -49.471-100.512 25.768 1.00 0.01 C
ATOM 8 O4' G B 511 -48.556 -99.712 26.564 1.00 0.01 O
ATOM 9 C3' G B 511 -48.971-100.391 24.325 1.00 0.01 C
ATOM 10 O3' G B 511 -49.770 -99.446 23.620 1.00 0.01 O
ATOM 11 C2' G B 511 -47.590 -99.802 24.515 1.00 0.01 C
ATOM 12 O2' G B 511 -47.103 -99.075 23.426 1.00 0.01 O
ATOM 13 C1' G B 511 -47.844 -98.908 25.684 1.00 0.01 C
ATOM 14 N9 G B 511 -46.631 -98.373 26.288 1.00 0.01 N
ATOM 15 C8 G B 511 -45.435 -99.010 26.394 1.00 0.01 C
ATOM 16 N7 G B 511 -44.471 -98.259 26.839 1.00 0.01 N
ATOM 17 C5 G B 511 -45.049 -97.012 26.968 1.00 0.01 C
ATOM 18 C6 G B 511 -44.477 -95.773 27.394 1.00 0.01 C
ATOM 19 O6 G B 511 -43.315 -95.525 27.758 1.00 0.01 O
ATOM 20 N1 G B 511 -45.393 -94.737 27.395 1.00 0.01 N
ATOM 21 C2 G B 511 -46.680 -94.897 27.013 1.00 0.01 C
ATOM 22 N2 G B 511 -47.375 -93.776 27.106 1.00 0.01 N
ATOM 23 N3 G B 511 -47.233 -96.026 26.597 1.00 0.01 N
ATOM 24 C4 G B 511 -46.369 -97.056 26.599 1.00 0.01 C
ATOM 25 P A B 512 -50.409 -99.800 22.195 1.00 0.01 P
ATOM 26 OP1 A B 512 -50.287-101.244 22.003 1.00 0.01 O
ATOM 27 OP2 A B 512 -49.815 -98.918 21.194 1.00 0.01 O
ATOM 28 O5' A B 512 -51.911 -99.419 22.407 1.00 0.01 O
TER
ATOM 2 P G A 25 -43.516 -90.129 18.239 1.00 0.01 P
ATOM 3 OP1 G A 25 -42.963 -88.807 18.084 1.00 0.01 O
ATOM 4 OP2 G A 25 -42.668 -91.183 18.770 1.00 0.01 O
ATOM 5 O5' G A 25 -44.841 -90.049 19.063 1.00 0.01 O
ATOM 6 C5' G A 25 -45.743 -88.989 18.865 1.00 0.01 C
ATOM 7 C4' G A 25 -47.091 -89.349 19.375 1.00 0.01 C
ATOM 8 O4' G A 25 -47.483 -90.603 18.804 1.00 0.01 O
ATOM 9 C3' G A 25 -47.178 -89.584 20.856 1.00 0.01 C
ATOM 10 O3' G A 25 -47.348 -88.394 21.565 1.00 0.01 O
ATOM 11 C2' G A 25 -48.371 -90.489 20.964 1.00 0.01 C
ATOM 12 O2' G A 25 -49.551 -89.732 20.807 1.00 0.01 O
ATOM 13 C1' G A 25 -48.203 -91.351 19.737 1.00 0.01 C
ATOM 14 N9 G A 25 -47.458 -92.575 20.010 1.00 0.01 N
ATOM 15 C8 G A 25 -46.118 -92.689 19.976 1.00 0.01 C
ATOM 16 N7 G A 25 -45.718 -93.889 20.208 1.00 0.01 N
ATOM 17 C5 G A 25 -46.877 -94.602 20.374 1.00 0.01 C
ATOM 18 C6 G A 25 -47.080 -95.961 20.657 1.00 0.01 C
ATOM 19 O6 G A 25 -46.260 -96.859 20.811 1.00 0.01 O
ATOM 20 N1 G A 25 -48.398 -96.297 20.777 1.00 0.01 N
ATOM 21 C2 G A 25 -49.410 -95.443 20.600 1.00 0.01 C
ATOM 22 N2 G A 25 -50.608 -95.997 20.745 1.00 0.01 N
ATOM 23 N3 G A 25 -49.248 -94.165 20.330 1.00 0.01 N
ATOM 24 C4 G A 25 -47.962 -93.812 20.237 1.00 0.01 C
ATOM 25 P G A 26 -46.586 -88.161 22.926 1.00 0.01 P
ATOM 26 OP1 G A 26 -46.499 -86.707 23.125 1.00 0.01 O
ATOM 27 OP2 G A 26 -45.353 -88.917 22.870 1.00 0.01 O
ATOM 28 O5' G A 26 -47.549 -88.821 23.981 1.00 0.01 O
TER
ATOM 1 O3' U B 510 -48.340-103.428 28.529 1.00 0.01 O
ATOM 2 P G B 511 -48.016-103.900 27.020 1.00 0.01 P
ATOM 3 OP1 G B 511 -48.954-104.970 26.688 1.00 0.01 O
ATOM 4 OP2 G B 511 -46.605-104.195 26.945 1.00 0.01 O
ATOM 5 O5' G B 511 -48.330-102.603 26.158 1.00 0.01 O
ATOM 6 C5' G B 511 -49.544-101.904 26.324 1.00 0.01 C
ATOM 7 C4' G B 511 -49.471-100.512 25.768 1.00 0.01 C
ATOM 8 O4' G B 511 -48.556 -99.712 26.564 1.00 0.01 O
ATOM 9 C3' G B 511 -48.971-100.391 24.325 1.00 0.01 C
ATOM 10 O3' G B 511 -49.770 -99.446 23.620 1.00 0.01 O
ATOM 11 C2' G B 511 -47.590 -99.802 24.515 1.00 0.01 C
ATOM 12 O2' G B 511 -47.103 -99.075 23.426 1.00 0.01 O
ATOM 13 C1' G B 511 -47.844 -98.908 25.684 1.00 0.01 C
ATOM 14 N9 G B 511 -46.631 -98.373 26.288 1.00 0.01 N
ATOM 15 C8 G B 511 -45.435 -99.010 26.394 1.00 0.01 C
ATOM 16 N7 G B 511 -44.471 -98.259 26.839 1.00 0.01 N
ATOM 17 C5 G B 511 -45.049 -97.012 26.968 1.00 0.01 C
ATOM 18 C6 G B 511 -44.477 -95.773 27.394 1.00 0.01 C
ATOM 19 O6 G B 511 -43.315 -95.525 27.758 1.00 0.01 O
ATOM 20 N1 G B 511 -45.393 -94.737 27.395 1.00 0.01 N
ATOM 21 C2 G B 511 -46.680 -94.897 27.013 1.00 0.01 C
ATOM 22 N2 G B 511 -47.375 -93.776 27.106 1.00 0.01 N
ATOM 23 N3 G B 511 -47.233 -96.026 26.597 1.00 0.01 N
ATOM 24 C4 G B 511 -46.369 -97.056 26.599 1.00 0.01 C
ATOM 25 P A B 512 -50.409 -99.800 22.195 1.00 0.01 P
ATOM 26 OP1 A B 512 -50.287-101.244 22.003 1.00 0.01 O
ATOM 27 OP2 A B 512 -49.815 -98.918 21.194 1.00 0.01 O
ATOM 28 O5' A B 512 -51.911 -99.419 22.407 1.00 0.01 O
TER
Atoms:
OP1: (-42.963,-88.807,18.084)
OP2: (-42.668,-91.183,18.770)
C3': (-47.178,-89.584,20.856)
C1': (-48.203,-91.351,19.737)
C5': (-45.743,-88.989,18.865)
O6: (-46.260,-96.859,20.811)
O4': (-47.483,-90.603,18.804)
C8: (-46.118,-92.689,19.976)
C2: (-49.410,-95.443,20.600)
C6: (-47.080,-95.961,20.657)
C5: (-46.877,-94.602,20.374)
C4: (-47.962,-93.812,20.237)
P: (-43.516,-90.129,18.239)
C4': (-47.091,-89.349,19.375)
C2': (-48.371,-90.489,20.964)
O2': (-49.551,-89.732,20.807)
N1: (-48.398,-96.297,20.777)
N2: (-50.608,-95.997,20.745)
N3: (-49.248,-94.165,20.330)
N7: (-45.718,-93.889,20.208)
N9: (-47.458,-92.575,20.010)
O5': (-44.841,-90.049,19.063)
O3': (-47.348,-88.394,21.565)
OP2: (-42.668,-91.183,18.770)
C3': (-47.178,-89.584,20.856)
C1': (-48.203,-91.351,19.737)
C5': (-45.743,-88.989,18.865)
O6: (-46.260,-96.859,20.811)
O4': (-47.483,-90.603,18.804)
C8: (-46.118,-92.689,19.976)
C2: (-49.410,-95.443,20.600)
C6: (-47.080,-95.961,20.657)
C5: (-46.877,-94.602,20.374)
C4: (-47.962,-93.812,20.237)
P: (-43.516,-90.129,18.239)
C4': (-47.091,-89.349,19.375)
C2': (-48.371,-90.489,20.964)
O2': (-49.551,-89.732,20.807)
N1: (-48.398,-96.297,20.777)
N2: (-50.608,-95.997,20.745)
N3: (-49.248,-94.165,20.330)
N7: (-45.718,-93.889,20.208)
N9: (-47.458,-92.575,20.010)
O5': (-44.841,-90.049,19.063)
O3': (-47.348,-88.394,21.565)
OP1: (-48.954,-104.970,26.688)
OP2: (-46.605,-104.195,26.945)
C3': (-48.971,-100.391,24.325)
C1': (-47.844,-98.908,25.684)
C5': (-49.544,-101.904,26.324)
O6: (-43.315,-95.525,27.758)
O4': (-48.556,-99.712,26.564)
C8: (-45.435,-99.010,26.394)
C2: (-46.680,-94.897,27.013)
C6: (-44.477,-95.773,27.394)
C5: (-45.049,-97.012,26.968)
C4: (-46.369,-97.056,26.599)
P: (-48.016,-103.900,27.020)
C4': (-49.471,-100.512,25.768)
C2': (-47.590,-99.802,24.515)
O2': (-47.103,-99.075,23.426)
N1: (-45.393,-94.737,27.395)
N2: (-47.375,-93.776,27.106)
N3: (-47.233,-96.026,26.597)
N7: (-44.471,-98.259,26.839)
N9: (-46.631,-98.373,26.288)
O5': (-48.330,-102.603,26.158)
O3': (-49.770,-99.446,23.620)
OP2: (-46.605,-104.195,26.945)
C3': (-48.971,-100.391,24.325)
C1': (-47.844,-98.908,25.684)
C5': (-49.544,-101.904,26.324)
O6: (-43.315,-95.525,27.758)
O4': (-48.556,-99.712,26.564)
C8: (-45.435,-99.010,26.394)
C2: (-46.680,-94.897,27.013)
C6: (-44.477,-95.773,27.394)
C5: (-45.049,-97.012,26.968)
C4: (-46.369,-97.056,26.599)
P: (-48.016,-103.900,27.020)
C4': (-49.471,-100.512,25.768)
C2': (-47.590,-99.802,24.515)
O2': (-47.103,-99.075,23.426)
N1: (-45.393,-94.737,27.395)
N2: (-47.375,-93.776,27.106)
N3: (-47.233,-96.026,26.597)
N7: (-44.471,-98.259,26.839)
N9: (-46.631,-98.373,26.288)
O5': (-48.330,-102.603,26.158)
O3': (-49.770,-99.446,23.620)
Image (generated by PyMOL):