Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A25:A511
Extra
PDB:
ATOM 1 O3' U A 24 -20.085 136.887 201.769 1.00 5.15 O
ATOM 2 P G A 25 -19.209 138.203 201.473 1.00 0.07 P
ATOM 3 OP1 G A 25 -18.206 137.816 200.455 1.00 0.07 O
ATOM 4 OP2 G A 25 -18.734 138.729 202.770 1.00 0.07 O
ATOM 5 O5' G A 25 -20.251 139.224 200.845 1.00 0.07 O
ATOM 6 C5' G A 25 -21.120 138.832 199.809 1.00 0.07 C
ATOM 7 C4' G A 25 -22.388 139.605 199.880 1.00 0.07 C
ATOM 8 O4' G A 25 -23.057 139.321 201.130 1.00 0.07 O
ATOM 9 C3' G A 25 -22.219 141.103 199.893 1.00 0.07 C
ATOM 10 O3' G A 25 -22.035 141.627 198.609 1.00 0.07 O
ATOM 11 C2' G A 25 -23.489 141.584 200.564 1.00 0.07 C
ATOM 12 O2' G A 25 -24.560 141.611 199.642 1.00 0.07 O
ATOM 13 C1' G A 25 -23.737 140.468 201.578 1.00 0.07 C
ATOM 14 N9 G A 25 -23.236 140.809 202.917 1.00 0.09 N
ATOM 15 C8 G A 25 -21.962 140.702 203.417 1.00 0.09 C
ATOM 16 N7 G A 25 -21.842 141.076 204.667 1.00 0.09 N
ATOM 17 C5 G A 25 -23.136 141.453 204.997 1.00 0.09 C
ATOM 18 C6 G A 25 -23.673 141.960 206.201 1.00 0.09 C
ATOM 19 O6 G A 25 -23.141 142.211 207.291 1.00 0.09 O
ATOM 20 N1 G A 25 -25.017 142.196 206.073 1.00 0.09 N
ATOM 21 C2 G A 25 -25.771 141.990 204.963 1.00 0.09 C
ATOM 22 N2 G A 25 -27.068 142.289 205.092 1.00 0.09 N
ATOM 23 N3 G A 25 -25.300 141.531 203.838 1.00 0.09 N
ATOM 24 C4 G A 25 -23.992 141.289 203.933 1.00 0.09 C
ATOM 25 P G A 26 -20.924 142.726 198.369 1.00 0.01 P
ATOM 26 OP1 G A 26 -20.598 142.715 196.946 1.00 0.01 O
ATOM 27 OP2 G A 26 -19.854 142.466 199.332 1.00 0.01 O
ATOM 28 O5' G A 26 -21.698 144.060 198.734 1.00 0.01 O
TER
ATOM 1 O3' U B 510 -25.348 150.402 212.320 1.00 0.01 O
ATOM 2 P G B 511 -25.303 148.900 212.887 1.00 0.64 P
ATOM 3 OP1 G B 511 -26.507 148.699 213.715 1.00 0.64 O
ATOM 4 OP2 G B 511 -23.969 148.687 213.504 1.00 0.64 O
ATOM 5 O5' G B 511 -25.426 148.068 211.553 1.00 0.64 O
ATOM 6 C5' G B 511 -26.236 148.559 210.506 1.00 0.64 C
ATOM 7 C4' G B 511 -26.111 147.732 209.262 1.00 0.64 C
ATOM 8 O4' G B 511 -24.927 148.139 208.525 1.00 0.64 O
ATOM 9 C3' G B 511 -25.965 146.229 209.494 1.00 0.64 C
ATOM 10 O3' G B 511 -26.608 145.530 208.433 1.00 0.64 O
ATOM 11 C2' G B 511 -24.477 146.038 209.368 1.00 0.64 C
ATOM 12 O2' G B 511 -24.088 144.715 209.075 1.00 0.64 O
ATOM 13 C1' G B 511 -24.205 146.989 208.216 1.00 0.64 C
ATOM 14 N9 G B 511 -22.801 147.302 207.998 1.00 0.94 N
ATOM 15 C8 G B 511 -21.778 147.189 208.896 1.00 0.94 C
ATOM 16 N7 G B 511 -20.613 147.434 208.358 1.00 0.94 N
ATOM 17 C5 G B 511 -20.913 147.671 207.022 1.00 0.94 C
ATOM 18 C6 G B 511 -20.044 147.969 205.940 1.00 0.94 C
ATOM 19 O6 G B 511 -18.794 148.090 205.967 1.00 0.94 O
ATOM 20 N1 G B 511 -20.753 148.131 204.739 1.00 0.94 N
ATOM 21 C2 G B 511 -22.103 148.027 204.614 1.00 0.94 C
ATOM 22 N2 G B 511 -22.532 148.242 203.369 1.00 0.94 N
ATOM 23 N3 G B 511 -22.922 147.750 205.614 1.00 0.94 N
ATOM 24 C4 G B 511 -22.255 147.578 206.772 1.00 0.94 C
ATOM 25 P A B 512 -27.311 144.128 208.708 1.00 0.01 P
ATOM 26 OP1 A B 512 -27.433 143.984 210.159 1.00 0.01 O
ATOM 27 OP2 A B 512 -26.574 143.128 207.960 1.00 0.01 O
ATOM 28 O5' A B 512 -28.741 144.313 208.061 1.00 0.01 O
TER
ATOM 2 P G A 25 -19.209 138.203 201.473 1.00 0.07 P
ATOM 3 OP1 G A 25 -18.206 137.816 200.455 1.00 0.07 O
ATOM 4 OP2 G A 25 -18.734 138.729 202.770 1.00 0.07 O
ATOM 5 O5' G A 25 -20.251 139.224 200.845 1.00 0.07 O
ATOM 6 C5' G A 25 -21.120 138.832 199.809 1.00 0.07 C
ATOM 7 C4' G A 25 -22.388 139.605 199.880 1.00 0.07 C
ATOM 8 O4' G A 25 -23.057 139.321 201.130 1.00 0.07 O
ATOM 9 C3' G A 25 -22.219 141.103 199.893 1.00 0.07 C
ATOM 10 O3' G A 25 -22.035 141.627 198.609 1.00 0.07 O
ATOM 11 C2' G A 25 -23.489 141.584 200.564 1.00 0.07 C
ATOM 12 O2' G A 25 -24.560 141.611 199.642 1.00 0.07 O
ATOM 13 C1' G A 25 -23.737 140.468 201.578 1.00 0.07 C
ATOM 14 N9 G A 25 -23.236 140.809 202.917 1.00 0.09 N
ATOM 15 C8 G A 25 -21.962 140.702 203.417 1.00 0.09 C
ATOM 16 N7 G A 25 -21.842 141.076 204.667 1.00 0.09 N
ATOM 17 C5 G A 25 -23.136 141.453 204.997 1.00 0.09 C
ATOM 18 C6 G A 25 -23.673 141.960 206.201 1.00 0.09 C
ATOM 19 O6 G A 25 -23.141 142.211 207.291 1.00 0.09 O
ATOM 20 N1 G A 25 -25.017 142.196 206.073 1.00 0.09 N
ATOM 21 C2 G A 25 -25.771 141.990 204.963 1.00 0.09 C
ATOM 22 N2 G A 25 -27.068 142.289 205.092 1.00 0.09 N
ATOM 23 N3 G A 25 -25.300 141.531 203.838 1.00 0.09 N
ATOM 24 C4 G A 25 -23.992 141.289 203.933 1.00 0.09 C
ATOM 25 P G A 26 -20.924 142.726 198.369 1.00 0.01 P
ATOM 26 OP1 G A 26 -20.598 142.715 196.946 1.00 0.01 O
ATOM 27 OP2 G A 26 -19.854 142.466 199.332 1.00 0.01 O
ATOM 28 O5' G A 26 -21.698 144.060 198.734 1.00 0.01 O
TER
ATOM 1 O3' U B 510 -25.348 150.402 212.320 1.00 0.01 O
ATOM 2 P G B 511 -25.303 148.900 212.887 1.00 0.64 P
ATOM 3 OP1 G B 511 -26.507 148.699 213.715 1.00 0.64 O
ATOM 4 OP2 G B 511 -23.969 148.687 213.504 1.00 0.64 O
ATOM 5 O5' G B 511 -25.426 148.068 211.553 1.00 0.64 O
ATOM 6 C5' G B 511 -26.236 148.559 210.506 1.00 0.64 C
ATOM 7 C4' G B 511 -26.111 147.732 209.262 1.00 0.64 C
ATOM 8 O4' G B 511 -24.927 148.139 208.525 1.00 0.64 O
ATOM 9 C3' G B 511 -25.965 146.229 209.494 1.00 0.64 C
ATOM 10 O3' G B 511 -26.608 145.530 208.433 1.00 0.64 O
ATOM 11 C2' G B 511 -24.477 146.038 209.368 1.00 0.64 C
ATOM 12 O2' G B 511 -24.088 144.715 209.075 1.00 0.64 O
ATOM 13 C1' G B 511 -24.205 146.989 208.216 1.00 0.64 C
ATOM 14 N9 G B 511 -22.801 147.302 207.998 1.00 0.94 N
ATOM 15 C8 G B 511 -21.778 147.189 208.896 1.00 0.94 C
ATOM 16 N7 G B 511 -20.613 147.434 208.358 1.00 0.94 N
ATOM 17 C5 G B 511 -20.913 147.671 207.022 1.00 0.94 C
ATOM 18 C6 G B 511 -20.044 147.969 205.940 1.00 0.94 C
ATOM 19 O6 G B 511 -18.794 148.090 205.967 1.00 0.94 O
ATOM 20 N1 G B 511 -20.753 148.131 204.739 1.00 0.94 N
ATOM 21 C2 G B 511 -22.103 148.027 204.614 1.00 0.94 C
ATOM 22 N2 G B 511 -22.532 148.242 203.369 1.00 0.94 N
ATOM 23 N3 G B 511 -22.922 147.750 205.614 1.00 0.94 N
ATOM 24 C4 G B 511 -22.255 147.578 206.772 1.00 0.94 C
ATOM 25 P A B 512 -27.311 144.128 208.708 1.00 0.01 P
ATOM 26 OP1 A B 512 -27.433 143.984 210.159 1.00 0.01 O
ATOM 27 OP2 A B 512 -26.574 143.128 207.960 1.00 0.01 O
ATOM 28 O5' A B 512 -28.741 144.313 208.061 1.00 0.01 O
TER
Atoms:
OP1: (-18.206,137.816,200.455)
OP2: (-18.734,138.729,202.770)
C3': (-22.219,141.103,199.893)
C1': (-23.737,140.468,201.578)
C5': (-21.120,138.832,199.809)
O6: (-23.141,142.211,207.291)
O4': (-23.057,139.321,201.130)
C8: (-21.962,140.702,203.417)
C2: (-25.771,141.990,204.963)
C6: (-23.673,141.960,206.201)
C5: (-23.136,141.453,204.997)
C4: (-23.992,141.289,203.933)
P: (-19.209,138.203,201.473)
C4': (-22.388,139.605,199.880)
C2': (-23.489,141.584,200.564)
O2': (-24.560,141.611,199.642)
N1: (-25.017,142.196,206.073)
N2: (-27.068,142.289,205.092)
N3: (-25.300,141.531,203.838)
N7: (-21.842,141.076,204.667)
N9: (-23.236,140.809,202.917)
O5': (-20.251,139.224,200.845)
O3': (-22.035,141.627,198.609)
OP2: (-18.734,138.729,202.770)
C3': (-22.219,141.103,199.893)
C1': (-23.737,140.468,201.578)
C5': (-21.120,138.832,199.809)
O6: (-23.141,142.211,207.291)
O4': (-23.057,139.321,201.130)
C8: (-21.962,140.702,203.417)
C2: (-25.771,141.990,204.963)
C6: (-23.673,141.960,206.201)
C5: (-23.136,141.453,204.997)
C4: (-23.992,141.289,203.933)
P: (-19.209,138.203,201.473)
C4': (-22.388,139.605,199.880)
C2': (-23.489,141.584,200.564)
O2': (-24.560,141.611,199.642)
N1: (-25.017,142.196,206.073)
N2: (-27.068,142.289,205.092)
N3: (-25.300,141.531,203.838)
N7: (-21.842,141.076,204.667)
N9: (-23.236,140.809,202.917)
O5': (-20.251,139.224,200.845)
O3': (-22.035,141.627,198.609)
OP1: (-26.507,148.699,213.715)
OP2: (-23.969,148.687,213.504)
C3': (-25.965,146.229,209.494)
C1': (-24.205,146.989,208.216)
C5': (-26.236,148.559,210.506)
O6: (-18.794,148.090,205.967)
O4': (-24.927,148.139,208.525)
C8: (-21.778,147.189,208.896)
C2: (-22.103,148.027,204.614)
C6: (-20.044,147.969,205.940)
C5: (-20.913,147.671,207.022)
C4: (-22.255,147.578,206.772)
P: (-25.303,148.900,212.887)
C4': (-26.111,147.732,209.262)
C2': (-24.477,146.038,209.368)
O2': (-24.088,144.715,209.075)
N1: (-20.753,148.131,204.739)
N2: (-22.532,148.242,203.369)
N3: (-22.922,147.750,205.614)
N7: (-20.613,147.434,208.358)
N9: (-22.801,147.302,207.998)
O5': (-25.426,148.068,211.553)
O3': (-26.608,145.530,208.433)
OP2: (-23.969,148.687,213.504)
C3': (-25.965,146.229,209.494)
C1': (-24.205,146.989,208.216)
C5': (-26.236,148.559,210.506)
O6: (-18.794,148.090,205.967)
O4': (-24.927,148.139,208.525)
C8: (-21.778,147.189,208.896)
C2: (-22.103,148.027,204.614)
C6: (-20.044,147.969,205.940)
C5: (-20.913,147.671,207.022)
C4: (-22.255,147.578,206.772)
P: (-25.303,148.900,212.887)
C4': (-26.111,147.732,209.262)
C2': (-24.477,146.038,209.368)
O2': (-24.088,144.715,209.075)
N1: (-20.753,148.131,204.739)
N2: (-22.532,148.242,203.369)
N3: (-22.922,147.750,205.614)
N7: (-20.613,147.434,208.358)
N9: (-22.801,147.302,207.998)
O5': (-25.426,148.068,211.553)
O3': (-26.608,145.530,208.433)
Image (generated by PyMOL):