Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A1205:A1228
Extra
PDB:
ATOM 1 O3' C A1204 -30.088 160.570 227.437 1.00 39.88 O
ATOM 2 P G A1205 -30.600 159.732 226.180 1.00 16.26 P
ATOM 3 OP1 G A1205 -32.055 160.048 226.008 1.00 16.26 O
ATOM 4 OP2 G A1205 -30.185 158.309 226.407 1.00 16.26 O
ATOM 5 O5' G A1205 -29.747 160.358 224.969 1.00 16.26 O
ATOM 6 C5' G A1205 -30.363 161.130 223.929 1.00 16.26 C
ATOM 7 C4' G A1205 -29.753 160.838 222.566 1.00 16.26 C
ATOM 8 O4' G A1205 -28.292 160.806 222.674 1.00 16.26 O
ATOM 9 C3' G A1205 -30.142 159.490 221.953 1.00 16.26 C
ATOM 10 O3' G A1205 -30.146 159.589 220.530 1.00 16.26 O
ATOM 11 C2' G A1205 -28.984 158.616 222.384 1.00 16.26 C
ATOM 12 O2' G A1205 -28.820 157.435 221.654 1.00 16.26 O
ATOM 13 C1' G A1205 -27.832 159.565 222.174 1.00 16.26 C
ATOM 14 N9 G A1205 -26.631 159.161 222.882 1.00 16.14 N
ATOM 15 C8 G A1205 -26.589 158.730 224.178 1.00 16.14 C
ATOM 16 N7 G A1205 -25.396 158.363 224.546 1.00 16.14 N
ATOM 17 C5 G A1205 -24.633 158.532 223.403 1.00 16.14 C
ATOM 18 C6 G A1205 -23.265 158.301 223.193 1.00 16.14 C
ATOM 19 O6 G A1205 -22.413 157.879 223.965 1.00 16.14 O
ATOM 20 N1 G A1205 -22.884 158.620 221.921 1.00 16.14 N
ATOM 21 C2 G A1205 -23.705 159.085 220.960 1.00 16.14 C
ATOM 22 N2 G A1205 -23.076 159.300 219.808 1.00 16.14 N
ATOM 23 N3 G A1205 -24.993 159.305 221.117 1.00 16.14 N
ATOM 24 C4 G A1205 -25.381 159.006 222.363 1.00 16.14 C
ATOM 25 P A A1206 -31.479 159.269 219.705 1.00 0.45 P
ATOM 26 OP1 A A1206 -32.606 159.737 220.537 1.00 0.45 O
ATOM 27 OP2 A A1206 -31.422 157.847 219.315 1.00 0.45 O
ATOM 28 O5' A A1206 -31.347 160.186 218.417 1.00 0.45 O
TER
ATOM 1 O3' U B1227 -25.112 148.193 218.634 1.00 6.57 O
ATOM 2 P G B1228 -23.940 149.289 218.664 1.00 0.01 P
ATOM 3 OP1 G B1228 -22.713 148.654 218.090 1.00 0.01 O
ATOM 4 OP2 G B1228 -23.877 149.831 220.026 1.00 0.01 O
ATOM 5 O5' G B1228 -24.483 150.392 217.671 1.00 0.01 O
ATOM 6 C5' G B1228 -24.133 150.346 216.306 1.00 0.01 C
ATOM 7 C4' G B1228 -24.641 151.549 215.578 1.00 0.01 C
ATOM 8 O4' G B1228 -26.049 151.713 215.845 1.00 0.01 O
ATOM 9 C3' G B1228 -24.016 152.878 215.972 1.00 0.01 C
ATOM 10 O3' G B1228 -22.785 153.117 215.302 1.00 0.01 O
ATOM 11 C2' G B1228 -25.098 153.865 215.587 1.00 0.01 C
ATOM 12 O2' G B1228 -25.051 154.128 214.184 1.00 0.01 O
ATOM 13 C1' G B1228 -26.369 153.073 215.900 1.00 0.01 C
ATOM 14 N9 G B1228 -26.891 153.343 217.239 1.00 0.04 N
ATOM 15 C8 G B1228 -26.538 152.613 218.319 1.00 0.04 C
ATOM 16 N7 G B1228 -27.152 153.012 219.394 1.00 0.04 N
ATOM 17 C5 G B1228 -27.986 154.037 219.001 1.00 0.04 C
ATOM 18 C6 G B1228 -28.888 154.829 219.760 1.00 0.04 C
ATOM 19 O6 G B1228 -29.141 154.756 220.988 1.00 0.04 O
ATOM 20 N1 G B1228 -29.512 155.772 218.948 1.00 0.04 N
ATOM 21 C2 G B1228 -29.286 155.910 217.602 1.00 0.04 C
ATOM 22 N2 G B1228 -29.955 156.863 216.933 1.00 0.04 N
ATOM 23 N3 G B1228 -28.449 155.166 216.913 1.00 0.04 N
ATOM 24 C4 G B1228 -27.841 154.244 217.659 1.00 0.04 C
ATOM 25 P G B1229 -21.411 153.192 216.121 1.00 14.28 P
ATOM 26 OP1 G B1229 -20.412 152.412 215.361 1.00 14.28 O
ATOM 27 OP2 G B1229 -21.699 152.798 217.502 1.00 14.28 O
ATOM 28 O5' G B1229 -21.056 154.741 216.066 1.00 14.28 O
TER
ATOM 2 P G A1205 -30.600 159.732 226.180 1.00 16.26 P
ATOM 3 OP1 G A1205 -32.055 160.048 226.008 1.00 16.26 O
ATOM 4 OP2 G A1205 -30.185 158.309 226.407 1.00 16.26 O
ATOM 5 O5' G A1205 -29.747 160.358 224.969 1.00 16.26 O
ATOM 6 C5' G A1205 -30.363 161.130 223.929 1.00 16.26 C
ATOM 7 C4' G A1205 -29.753 160.838 222.566 1.00 16.26 C
ATOM 8 O4' G A1205 -28.292 160.806 222.674 1.00 16.26 O
ATOM 9 C3' G A1205 -30.142 159.490 221.953 1.00 16.26 C
ATOM 10 O3' G A1205 -30.146 159.589 220.530 1.00 16.26 O
ATOM 11 C2' G A1205 -28.984 158.616 222.384 1.00 16.26 C
ATOM 12 O2' G A1205 -28.820 157.435 221.654 1.00 16.26 O
ATOM 13 C1' G A1205 -27.832 159.565 222.174 1.00 16.26 C
ATOM 14 N9 G A1205 -26.631 159.161 222.882 1.00 16.14 N
ATOM 15 C8 G A1205 -26.589 158.730 224.178 1.00 16.14 C
ATOM 16 N7 G A1205 -25.396 158.363 224.546 1.00 16.14 N
ATOM 17 C5 G A1205 -24.633 158.532 223.403 1.00 16.14 C
ATOM 18 C6 G A1205 -23.265 158.301 223.193 1.00 16.14 C
ATOM 19 O6 G A1205 -22.413 157.879 223.965 1.00 16.14 O
ATOM 20 N1 G A1205 -22.884 158.620 221.921 1.00 16.14 N
ATOM 21 C2 G A1205 -23.705 159.085 220.960 1.00 16.14 C
ATOM 22 N2 G A1205 -23.076 159.300 219.808 1.00 16.14 N
ATOM 23 N3 G A1205 -24.993 159.305 221.117 1.00 16.14 N
ATOM 24 C4 G A1205 -25.381 159.006 222.363 1.00 16.14 C
ATOM 25 P A A1206 -31.479 159.269 219.705 1.00 0.45 P
ATOM 26 OP1 A A1206 -32.606 159.737 220.537 1.00 0.45 O
ATOM 27 OP2 A A1206 -31.422 157.847 219.315 1.00 0.45 O
ATOM 28 O5' A A1206 -31.347 160.186 218.417 1.00 0.45 O
TER
ATOM 1 O3' U B1227 -25.112 148.193 218.634 1.00 6.57 O
ATOM 2 P G B1228 -23.940 149.289 218.664 1.00 0.01 P
ATOM 3 OP1 G B1228 -22.713 148.654 218.090 1.00 0.01 O
ATOM 4 OP2 G B1228 -23.877 149.831 220.026 1.00 0.01 O
ATOM 5 O5' G B1228 -24.483 150.392 217.671 1.00 0.01 O
ATOM 6 C5' G B1228 -24.133 150.346 216.306 1.00 0.01 C
ATOM 7 C4' G B1228 -24.641 151.549 215.578 1.00 0.01 C
ATOM 8 O4' G B1228 -26.049 151.713 215.845 1.00 0.01 O
ATOM 9 C3' G B1228 -24.016 152.878 215.972 1.00 0.01 C
ATOM 10 O3' G B1228 -22.785 153.117 215.302 1.00 0.01 O
ATOM 11 C2' G B1228 -25.098 153.865 215.587 1.00 0.01 C
ATOM 12 O2' G B1228 -25.051 154.128 214.184 1.00 0.01 O
ATOM 13 C1' G B1228 -26.369 153.073 215.900 1.00 0.01 C
ATOM 14 N9 G B1228 -26.891 153.343 217.239 1.00 0.04 N
ATOM 15 C8 G B1228 -26.538 152.613 218.319 1.00 0.04 C
ATOM 16 N7 G B1228 -27.152 153.012 219.394 1.00 0.04 N
ATOM 17 C5 G B1228 -27.986 154.037 219.001 1.00 0.04 C
ATOM 18 C6 G B1228 -28.888 154.829 219.760 1.00 0.04 C
ATOM 19 O6 G B1228 -29.141 154.756 220.988 1.00 0.04 O
ATOM 20 N1 G B1228 -29.512 155.772 218.948 1.00 0.04 N
ATOM 21 C2 G B1228 -29.286 155.910 217.602 1.00 0.04 C
ATOM 22 N2 G B1228 -29.955 156.863 216.933 1.00 0.04 N
ATOM 23 N3 G B1228 -28.449 155.166 216.913 1.00 0.04 N
ATOM 24 C4 G B1228 -27.841 154.244 217.659 1.00 0.04 C
ATOM 25 P G B1229 -21.411 153.192 216.121 1.00 14.28 P
ATOM 26 OP1 G B1229 -20.412 152.412 215.361 1.00 14.28 O
ATOM 27 OP2 G B1229 -21.699 152.798 217.502 1.00 14.28 O
ATOM 28 O5' G B1229 -21.056 154.741 216.066 1.00 14.28 O
TER
Atoms:
OP1: (-32.055,160.048,226.008)
OP2: (-30.185,158.309,226.407)
C3': (-30.142,159.490,221.953)
C1': (-27.832,159.565,222.174)
C5': (-30.363,161.130,223.929)
O6: (-22.413,157.879,223.965)
O4': (-28.292,160.806,222.674)
C8: (-26.589,158.730,224.178)
C2: (-23.705,159.085,220.960)
C6: (-23.265,158.301,223.193)
C5: (-24.633,158.532,223.403)
C4: (-25.381,159.006,222.363)
P: (-30.600,159.732,226.180)
C4': (-29.753,160.838,222.566)
C2': (-28.984,158.616,222.384)
O2': (-28.820,157.435,221.654)
N1: (-22.884,158.620,221.921)
N2: (-23.076,159.300,219.808)
N3: (-24.993,159.305,221.117)
N7: (-25.396,158.363,224.546)
N9: (-26.631,159.161,222.882)
O5': (-29.747,160.358,224.969)
O3': (-30.146,159.589,220.530)
OP2: (-30.185,158.309,226.407)
C3': (-30.142,159.490,221.953)
C1': (-27.832,159.565,222.174)
C5': (-30.363,161.130,223.929)
O6: (-22.413,157.879,223.965)
O4': (-28.292,160.806,222.674)
C8: (-26.589,158.730,224.178)
C2: (-23.705,159.085,220.960)
C6: (-23.265,158.301,223.193)
C5: (-24.633,158.532,223.403)
C4: (-25.381,159.006,222.363)
P: (-30.600,159.732,226.180)
C4': (-29.753,160.838,222.566)
C2': (-28.984,158.616,222.384)
O2': (-28.820,157.435,221.654)
N1: (-22.884,158.620,221.921)
N2: (-23.076,159.300,219.808)
N3: (-24.993,159.305,221.117)
N7: (-25.396,158.363,224.546)
N9: (-26.631,159.161,222.882)
O5': (-29.747,160.358,224.969)
O3': (-30.146,159.589,220.530)
OP1: (-22.713,148.654,218.090)
OP2: (-23.877,149.831,220.026)
C3': (-24.016,152.878,215.972)
C1': (-26.369,153.073,215.900)
C5': (-24.133,150.346,216.306)
O6: (-29.141,154.756,220.988)
O4': (-26.049,151.713,215.845)
C8: (-26.538,152.613,218.319)
C2: (-29.286,155.910,217.602)
C6: (-28.888,154.829,219.760)
C5: (-27.986,154.037,219.001)
C4: (-27.841,154.244,217.659)
P: (-23.940,149.289,218.664)
C4': (-24.641,151.549,215.578)
C2': (-25.098,153.865,215.587)
O2': (-25.051,154.128,214.184)
N1: (-29.512,155.772,218.948)
N2: (-29.955,156.863,216.933)
N3: (-28.449,155.166,216.913)
N7: (-27.152,153.012,219.394)
N9: (-26.891,153.343,217.239)
O5': (-24.483,150.392,217.671)
O3': (-22.785,153.117,215.302)
OP2: (-23.877,149.831,220.026)
C3': (-24.016,152.878,215.972)
C1': (-26.369,153.073,215.900)
C5': (-24.133,150.346,216.306)
O6: (-29.141,154.756,220.988)
O4': (-26.049,151.713,215.845)
C8: (-26.538,152.613,218.319)
C2: (-29.286,155.910,217.602)
C6: (-28.888,154.829,219.760)
C5: (-27.986,154.037,219.001)
C4: (-27.841,154.244,217.659)
P: (-23.940,149.289,218.664)
C4': (-24.641,151.549,215.578)
C2': (-25.098,153.865,215.587)
O2': (-25.051,154.128,214.184)
N1: (-29.512,155.772,218.948)
N2: (-29.955,156.863,216.933)
N3: (-28.449,155.166,216.913)
N7: (-27.152,153.012,219.394)
N9: (-26.891,153.343,217.239)
O5': (-24.483,150.392,217.671)
O3': (-22.785,153.117,215.302)
Image (generated by PyMOL):