ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNI:A1209:A1210

Extra

PDB:
ATOM 1 O3' A A1208 77.321 -78.685 -24.277 1.00 39.54 O
ATOM 2 P A A1209 76.329 -77.422 -24.382 1.00 33.88 P
ATOM 3 OP1 A A1209 76.445 -76.529 -23.201 1.00 37.30 O
ATOM 4 OP2 A A1209 74.973 -77.962 -24.743 1.00 41.94 O
ATOM 5 O5' A A1209 76.938 -76.623 -25.623 1.00 35.30 O
ATOM 6 C5' A A1209 78.131 -75.883 -25.475 1.00 38.96 C
ATOM 7 C4' A A1209 78.307 -74.978 -26.653 1.00 41.04 C
ATOM 8 O4' A A1209 78.469 -75.785 -27.839 1.00 43.13 O
ATOM 9 C3' A A1209 77.144 -74.034 -26.945 1.00 40.15 C
ATOM 10 O3' A A1209 77.367 -72.826 -26.201 1.00 45.30 O
ATOM 11 C2' A A1209 77.288 -73.781 -28.447 1.00 47.05 C
ATOM 12 O2' A A1209 78.163 -72.687 -28.682 1.00 51.90 O
ATOM 13 C1' A A1209 77.955 -75.077 -28.945 1.00 38.68 C
ATOM 14 N9 A A1209 77.214 -76.001 -29.805 1.00 34.63 N
ATOM 15 C8 A A1209 76.557 -77.149 -29.440 1.00 40.31 C
ATOM 16 N7 A A1209 76.039 -77.806 -30.451 1.00 40.49 N
ATOM 17 C5 A A1209 76.362 -77.027 -31.553 1.00 32.18 C
ATOM 18 C6 A A1209 76.093 -77.168 -32.914 1.00 30.72 C
ATOM 19 N6 A A1209 75.393 -78.178 -33.436 1.00 34.65 N
ATOM 20 N1 A A1209 76.565 -76.219 -33.742 1.00 32.37 N
ATOM 21 C2 A A1209 77.246 -75.198 -33.228 1.00 33.48 C
ATOM 22 N3 A A1209 77.554 -74.947 -31.972 1.00 32.39 N
ATOM 23 C4 A A1209 77.080 -75.911 -31.171 1.00 33.07 C
ATOM 24 P U A1210 76.136 -71.879 -25.787 1.00 39.07 P
ATOM 25 OP1 U A1210 75.240 -71.658 -26.960 1.00 45.72 O
ATOM 26 OP2 U A1210 76.704 -70.715 -25.070 1.00 32.85 O
ATOM 27 O5' U A1210 75.350 -72.741 -24.718 1.00 33.80 O
TER

ATOM 1 O3' A B1209 77.367 -72.826 -26.201 1.00 45.30 O
ATOM 2 P U B1210 76.136 -71.879 -25.787 1.00 39.07 P
ATOM 3 OP1 U B1210 75.240 -71.658 -26.960 1.00 45.72 O
ATOM 4 OP2 U B1210 76.704 -70.715 -25.070 1.00 32.85 O
ATOM 5 O5' U B1210 75.350 -72.741 -24.718 1.00 33.80 O
ATOM 6 C5' U B1210 75.949 -73.157 -23.505 1.00 34.80 C
ATOM 7 C4' U B1210 75.018 -72.856 -22.363 1.00 37.98 C
ATOM 8 O4' U B1210 75.346 -71.564 -21.828 1.00 30.08 O
ATOM 9 C3' U B1210 73.544 -72.739 -22.733 1.00 39.89 C
ATOM 10 O3' U B1210 72.866 -73.996 -22.774 1.00 38.79 O
ATOM 11 C2' U B1210 72.976 -71.843 -21.642 1.00 38.50 C
ATOM 12 O2' U B1210 72.514 -72.615 -20.561 1.00 45.62 O
ATOM 13 C1' U B1210 74.191 -71.005 -21.232 1.00 32.27 C
ATOM 14 N1 U B1210 74.117 -69.573 -21.565 1.00 35.10 N
ATOM 15 C2 U B1210 73.594 -68.685 -20.605 1.00 38.22 C
ATOM 16 O2 U B1210 73.160 -69.042 -19.498 1.00 35.66 O
ATOM 17 N3 U B1210 73.597 -67.360 -20.993 1.00 39.28 N
ATOM 18 C4 U B1210 74.050 -66.836 -22.198 1.00 33.25 C
ATOM 19 O4 U B1210 74.101 -65.614 -22.344 1.00 41.74 O
ATOM 20 C5 U B1210 74.539 -67.804 -23.123 1.00 26.43 C
ATOM 21 C6 U B1210 74.560 -69.101 -22.788 1.00 36.11 C
ATOM 22 P G B1211 71.419 -74.102 -23.476 1.00 42.07 P
ATOM 23 OP1 G B1211 70.597 -72.951 -23.007 1.00 46.62 O
ATOM 24 OP2 G B1211 70.904 -75.482 -23.311 1.00 37.53 O
ATOM 25 O5' G B1211 71.705 -73.851 -25.023 1.00 44.67 O
TER

Atoms:
OP1: (76.445,-76.529,-23.201)
OP2: (74.973,-77.962,-24.743)
C3': (77.144,-74.034,-26.945)
C1': (77.955,-75.077,-28.945)
C5': (78.131,-75.883,-25.475)
O4': (78.469,-75.785,-27.839)
C8: (76.557,-77.149,-29.440)
O2': (78.163,-72.687,-28.682)
C6: (76.093,-77.168,-32.914)
C5: (76.362,-77.027,-31.553)
C4: (77.080,-75.911,-31.171)
P: (76.329,-77.422,-24.382)
C4': (78.307,-74.978,-26.653)
C2': (77.288,-73.781,-28.447)
C2: (77.246,-75.198,-33.228)
N1: (76.565,-76.219,-33.742)
N3: (77.554,-74.947,-31.972)
N6: (75.393,-78.178,-33.436)
N7: (76.039,-77.806,-30.451)
N9: (77.214,-76.001,-29.805)
O5': (76.938,-76.623,-25.623)
O3': (77.367,-72.826,-26.201)
C4: (74.050,-66.836,-22.198)
N3: (73.597,-67.360,-20.993)
OP1: (75.240,-71.658,-26.960)
OP2: (76.704,-70.715,-25.070)
C2: (73.594,-68.685,-20.605)
C1': (74.191,-71.005,-21.232)
C3': (73.544,-72.739,-22.733)
O5': (75.350,-72.741,-24.718)
O4': (75.346,-71.564,-21.828)
C5': (75.949,-73.157,-23.505)
P: (76.136,-71.879,-25.787)
C4': (75.018,-72.856,-22.363)
C2': (72.976,-71.843,-21.642)
O2': (72.514,-72.615,-20.561)
N1: (74.117,-69.573,-21.565)
O4: (74.101,-65.614,-22.344)
O2: (73.160,-69.042,-19.498)
C6: (74.560,-69.101,-22.788)
C5: (74.539,-67.804,-23.123)
O3': (72.866,-73.996,-22.774)
Image (generated by PyMOL):
PyMOL image
show in jmol