ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J00:A663:A681

Extra

PDB:
ATOM 1 O3' A A 662 -31.261 168.548 87.962 1.00 32.88 O
ATOM 2 P G A 663 -32.471 169.074 88.867 1.00 57.99 P
ATOM 3 OP1 G A 663 -33.062 170.239 88.166 1.00 54.96 O
ATOM 4 OP2 G A 663 -31.956 169.221 90.253 1.00 53.29 O
ATOM 5 O5' G A 663 -33.541 167.894 88.851 1.00 33.19 O
ATOM 6 C5' G A 663 -34.216 167.544 87.632 1.00 31.55 C
ATOM 7 C4' G A 663 -34.842 166.174 87.743 1.00 30.58 C
ATOM 8 O4' G A 663 -33.824 165.177 88.027 1.00 30.26 O
ATOM 9 C3' G A 663 -35.885 166.002 88.831 1.00 29.81 C
ATOM 10 O3' G A 663 -37.138 166.475 88.343 1.00 29.26 O
ATOM 11 C2' G A 663 -35.849 164.491 89.086 1.00 29.89 C
ATOM 12 O2' G A 663 -36.607 163.725 88.166 1.00 29.95 O
ATOM 13 C1' G A 663 -34.370 164.163 88.849 1.00 29.19 C
ATOM 14 N9 G A 663 -33.581 164.085 90.074 1.00 46.89 N
ATOM 15 C8 G A 663 -32.791 165.070 90.615 1.00 46.59 C
ATOM 16 N7 G A 663 -32.228 164.717 91.738 1.00 47.06 N
ATOM 17 C5 G A 663 -32.671 163.419 91.949 1.00 47.86 C
ATOM 18 C6 G A 663 -32.400 162.515 93.012 1.00 49.05 C
ATOM 19 O6 G A 663 -31.697 162.689 94.021 1.00 52.90 O
ATOM 20 N1 G A 663 -33.046 161.301 92.820 1.00 48.83 N
ATOM 21 C2 G A 663 -33.850 160.994 91.751 1.00 48.63 C
ATOM 22 N2 G A 663 -34.382 159.768 91.747 1.00 49.19 N
ATOM 23 N3 G A 663 -34.115 161.825 90.761 1.00 48.31 N
ATOM 24 C4 G A 663 -33.498 163.011 90.924 1.00 48.09 C
ATOM 25 P U A 664 -38.356 166.724 89.359 1.00 49.85 P
ATOM 26 OP1 U A 664 -39.439 167.430 88.621 1.00 48.59 O
ATOM 27 OP2 U A 664 -37.802 167.305 90.609 1.00 47.40 O
ATOM 28 O5' U A 664 -38.898 165.268 89.683 1.00 12.39 O
TER

ATOM 1 O3' A B 680 -33.486 159.462 102.897 1.00 27.90 O
ATOM 2 P G B 681 -32.676 160.243 101.758 1.00 55.59 P
ATOM 3 OP1 G B 681 -31.293 159.717 101.691 1.00 37.74 O
ATOM 4 OP2 G B 681 -32.893 161.672 102.016 1.00 37.88 O
ATOM 5 O5' G B 681 -33.422 159.845 100.413 1.00 44.10 O
ATOM 6 C5' G B 681 -33.739 158.472 100.111 1.00 42.59 C
ATOM 7 C4' G B 681 -34.378 158.393 98.749 1.00 42.42 C
ATOM 8 O4' G B 681 -35.641 159.115 98.781 1.00 43.72 O
ATOM 9 C3' G B 681 -33.532 159.045 97.662 1.00 41.23 C
ATOM 10 O3' G B 681 -33.719 158.364 96.430 1.00 41.21 O
ATOM 11 C2' G B 681 -34.120 160.445 97.559 1.00 41.09 C
ATOM 12 O2' G B 681 -33.925 161.021 96.284 1.00 40.77 O
ATOM 13 C1' G B 681 -35.598 160.188 97.861 1.00 41.87 C
ATOM 14 N9 G B 681 -36.279 161.327 98.465 1.00 96.64 N
ATOM 15 C8 G B 681 -35.917 162.009 99.601 1.00 96.61 C
ATOM 16 N7 G B 681 -36.734 162.981 99.896 1.00 97.68 N
ATOM 17 C5 G B 681 -37.692 162.938 98.893 1.00 97.37 C
ATOM 18 C6 G B 681 -38.842 163.747 98.680 1.00 98.43 C
ATOM 19 O6 G B 681 -39.260 164.696 99.357 1.00 98.12 O
ATOM 20 N1 G B 681 -39.533 163.355 97.543 1.00 99.97 N
ATOM 21 C2 G B 681 -39.174 162.322 96.719 1.00 97.77 C
ATOM 22 N2 G B 681 -39.978 162.097 95.671 1.00 95.63 N
ATOM 23 N3 G B 681 -38.110 161.564 96.905 1.00 98.04 N
ATOM 24 C4 G B 681 -37.421 161.925 98.002 1.00 96.95 C
ATOM 25 P A B 682 -32.502 158.242 95.387 1.00 17.47 P
ATOM 26 OP1 A B 682 -31.226 158.479 96.103 1.00 31.59 O
ATOM 27 OP2 A B 682 -32.837 159.063 94.199 1.00 29.70 O
ATOM 28 O5' A B 682 -32.573 156.707 94.948 1.00 19.42 O
TER

Atoms:
OP1: (-33.062,170.239,88.166)
OP2: (-31.956,169.221,90.253)
C3': (-35.885,166.002,88.831)
C1': (-34.370,164.163,88.849)
C5': (-34.216,167.544,87.632)
O6: (-31.697,162.689,94.021)
O4': (-33.824,165.177,88.027)
C8: (-32.791,165.070,90.615)
C2: (-33.850,160.994,91.751)
C6: (-32.400,162.515,93.012)
C5: (-32.671,163.419,91.949)
C4: (-33.498,163.011,90.924)
P: (-32.471,169.074,88.867)
C4': (-34.842,166.174,87.743)
C2': (-35.849,164.491,89.086)
O2': (-36.607,163.725,88.166)
N1: (-33.046,161.301,92.820)
N2: (-34.382,159.768,91.747)
N3: (-34.115,161.825,90.761)
N7: (-32.228,164.717,91.738)
N9: (-33.581,164.085,90.074)
O5': (-33.541,167.894,88.851)
O3': (-37.138,166.475,88.343)
OP1: (-31.293,159.717,101.691)
OP2: (-32.893,161.672,102.016)
C3': (-33.532,159.045,97.662)
C1': (-35.598,160.188,97.861)
C5': (-33.739,158.472,100.111)
O6: (-39.260,164.696,99.357)
O4': (-35.641,159.115,98.781)
C8: (-35.917,162.009,99.601)
C2: (-39.174,162.322,96.719)
C6: (-38.842,163.747,98.680)
C5: (-37.692,162.938,98.893)
C4: (-37.421,161.925,98.002)
P: (-32.676,160.243,101.758)
C4': (-34.378,158.393,98.749)
C2': (-34.120,160.445,97.559)
O2': (-33.925,161.021,96.284)
N1: (-39.533,163.355,97.543)
N2: (-39.978,162.097,95.671)
N3: (-38.110,161.564,96.905)
N7: (-36.734,162.981,99.896)
N9: (-36.279,161.327,98.465)
O5': (-33.422,159.845,100.413)
O3': (-33.719,158.364,96.430)
Image (generated by PyMOL):
PyMOL image
show in jmol