Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0568:0565
Extra
PDB:
ATOM 1 O3' G A 567 6.430 94.264 135.135 1.00 55.98 O
ATOM 2 P A A 568 5.408 94.652 133.958 1.00 56.25 P
ATOM 3 OP1 A A 568 4.709 95.879 134.421 1.00 53.69 O
ATOM 4 OP2 A A 568 4.616 93.453 133.570 1.00 54.14 O
ATOM 5 O5' A A 568 6.350 95.045 132.732 1.00 57.18 O
ATOM 6 C5' A A 568 6.973 96.348 132.658 1.00 56.37 C
ATOM 7 C4' A A 568 8.059 96.354 131.608 1.00 55.22 C
ATOM 8 O4' A A 568 9.024 95.320 131.932 1.00 55.23 O
ATOM 9 C3' A A 568 7.632 96.029 130.183 1.00 55.09 C
ATOM 10 O3' A A 568 7.157 97.185 129.498 1.00 55.34 O
ATOM 11 C2' A A 568 8.942 95.553 129.568 1.00 55.43 C
ATOM 12 O2' A A 568 9.799 96.618 129.194 1.00 56.56 O
ATOM 13 C1' A A 568 9.566 94.788 130.738 1.00 54.36 C
ATOM 14 N9 A A 568 9.279 93.355 130.690 1.00 53.47 N
ATOM 15 C8 A A 568 8.072 92.719 130.848 1.00 53.43 C
ATOM 16 N7 A A 568 8.136 91.418 130.693 1.00 52.73 N
ATOM 17 C5 A A 568 9.477 91.181 130.427 1.00 51.87 C
ATOM 18 C6 A A 568 10.196 90.003 130.161 1.00 50.89 C
ATOM 19 N6 A A 568 9.643 88.788 130.117 1.00 51.25 N
ATOM 20 N1 A A 568 11.523 90.116 129.938 1.00 51.62 N
ATOM 21 C2 A A 568 12.083 91.327 129.983 1.00 51.36 C
ATOM 22 N3 A A 568 11.516 92.505 130.226 1.00 54.19 N
ATOM 23 C4 A A 568 10.195 92.362 130.438 1.00 53.10 C
ATOM 24 P G A 569 5.634 97.256 128.978 1.00 56.60 P
ATOM 25 OP1 G A 569 5.532 98.465 128.118 1.00 56.51 O
ATOM 26 OP2 G A 569 4.748 97.122 130.155 1.00 58.42 O
ATOM 27 O5' G A 569 5.413 95.956 128.077 1.00 55.35 O
TER
ATOM 1 O3' C B 564 1.843 81.328 133.646 1.00 78.13 O
ATOM 2 P G B 565 2.464 81.820 135.041 1.00 78.06 P
ATOM 3 OP1 G B 565 3.149 80.654 135.658 1.00 77.56 O
ATOM 4 OP2 G B 565 1.411 82.551 135.801 1.00 76.54 O
ATOM 5 O5' G B 565 3.576 82.869 134.595 1.00 78.23 O
ATOM 6 C5' G B 565 4.653 82.470 133.723 1.00 75.94 C
ATOM 7 C4' G B 565 5.490 83.664 133.335 1.00 74.50 C
ATOM 8 O4' G B 565 4.735 84.553 132.463 1.00 74.09 O
ATOM 9 C3' G B 565 5.915 84.572 134.473 1.00 73.66 C
ATOM 10 O3' G B 565 6.984 84.030 135.239 1.00 71.88 O
ATOM 11 C2' G B 565 6.275 85.848 133.722 1.00 74.08 C
ATOM 12 O2' G B 565 7.525 85.769 133.061 1.00 73.83 O
ATOM 13 C1' G B 565 5.156 85.895 132.678 1.00 73.92 C
ATOM 14 N9 G B 565 4.013 86.679 133.142 1.00 74.06 N
ATOM 15 C8 G B 565 2.827 86.205 133.649 1.00 74.02 C
ATOM 16 N7 G B 565 2.011 87.156 134.016 1.00 74.33 N
ATOM 17 C5 G B 565 2.694 88.328 133.728 1.00 73.54 C
ATOM 18 C6 G B 565 2.318 89.679 133.921 1.00 73.63 C
ATOM 19 O6 G B 565 1.274 90.126 134.406 1.00 73.68 O
ATOM 20 N1 G B 565 3.309 90.553 133.488 1.00 74.49 N
ATOM 21 C2 G B 565 4.511 90.177 132.944 1.00 74.74 C
ATOM 22 N2 G B 565 5.338 91.171 132.585 1.00 74.31 N
ATOM 23 N3 G B 565 4.876 88.919 132.764 1.00 74.48 N
ATOM 24 C4 G B 565 3.926 88.053 133.177 1.00 73.93 C
ATOM 25 P C B 566 6.855 83.969 136.843 1.00 69.82 P
ATOM 26 OP1 C B 566 8.117 83.426 137.400 1.00 71.36 O
ATOM 27 OP2 C B 566 5.569 83.298 137.156 1.00 71.15 O
ATOM 28 O5' C B 566 6.741 85.494 137.286 1.00 68.75 O
TER
ATOM 2 P A A 568 5.408 94.652 133.958 1.00 56.25 P
ATOM 3 OP1 A A 568 4.709 95.879 134.421 1.00 53.69 O
ATOM 4 OP2 A A 568 4.616 93.453 133.570 1.00 54.14 O
ATOM 5 O5' A A 568 6.350 95.045 132.732 1.00 57.18 O
ATOM 6 C5' A A 568 6.973 96.348 132.658 1.00 56.37 C
ATOM 7 C4' A A 568 8.059 96.354 131.608 1.00 55.22 C
ATOM 8 O4' A A 568 9.024 95.320 131.932 1.00 55.23 O
ATOM 9 C3' A A 568 7.632 96.029 130.183 1.00 55.09 C
ATOM 10 O3' A A 568 7.157 97.185 129.498 1.00 55.34 O
ATOM 11 C2' A A 568 8.942 95.553 129.568 1.00 55.43 C
ATOM 12 O2' A A 568 9.799 96.618 129.194 1.00 56.56 O
ATOM 13 C1' A A 568 9.566 94.788 130.738 1.00 54.36 C
ATOM 14 N9 A A 568 9.279 93.355 130.690 1.00 53.47 N
ATOM 15 C8 A A 568 8.072 92.719 130.848 1.00 53.43 C
ATOM 16 N7 A A 568 8.136 91.418 130.693 1.00 52.73 N
ATOM 17 C5 A A 568 9.477 91.181 130.427 1.00 51.87 C
ATOM 18 C6 A A 568 10.196 90.003 130.161 1.00 50.89 C
ATOM 19 N6 A A 568 9.643 88.788 130.117 1.00 51.25 N
ATOM 20 N1 A A 568 11.523 90.116 129.938 1.00 51.62 N
ATOM 21 C2 A A 568 12.083 91.327 129.983 1.00 51.36 C
ATOM 22 N3 A A 568 11.516 92.505 130.226 1.00 54.19 N
ATOM 23 C4 A A 568 10.195 92.362 130.438 1.00 53.10 C
ATOM 24 P G A 569 5.634 97.256 128.978 1.00 56.60 P
ATOM 25 OP1 G A 569 5.532 98.465 128.118 1.00 56.51 O
ATOM 26 OP2 G A 569 4.748 97.122 130.155 1.00 58.42 O
ATOM 27 O5' G A 569 5.413 95.956 128.077 1.00 55.35 O
TER
ATOM 1 O3' C B 564 1.843 81.328 133.646 1.00 78.13 O
ATOM 2 P G B 565 2.464 81.820 135.041 1.00 78.06 P
ATOM 3 OP1 G B 565 3.149 80.654 135.658 1.00 77.56 O
ATOM 4 OP2 G B 565 1.411 82.551 135.801 1.00 76.54 O
ATOM 5 O5' G B 565 3.576 82.869 134.595 1.00 78.23 O
ATOM 6 C5' G B 565 4.653 82.470 133.723 1.00 75.94 C
ATOM 7 C4' G B 565 5.490 83.664 133.335 1.00 74.50 C
ATOM 8 O4' G B 565 4.735 84.553 132.463 1.00 74.09 O
ATOM 9 C3' G B 565 5.915 84.572 134.473 1.00 73.66 C
ATOM 10 O3' G B 565 6.984 84.030 135.239 1.00 71.88 O
ATOM 11 C2' G B 565 6.275 85.848 133.722 1.00 74.08 C
ATOM 12 O2' G B 565 7.525 85.769 133.061 1.00 73.83 O
ATOM 13 C1' G B 565 5.156 85.895 132.678 1.00 73.92 C
ATOM 14 N9 G B 565 4.013 86.679 133.142 1.00 74.06 N
ATOM 15 C8 G B 565 2.827 86.205 133.649 1.00 74.02 C
ATOM 16 N7 G B 565 2.011 87.156 134.016 1.00 74.33 N
ATOM 17 C5 G B 565 2.694 88.328 133.728 1.00 73.54 C
ATOM 18 C6 G B 565 2.318 89.679 133.921 1.00 73.63 C
ATOM 19 O6 G B 565 1.274 90.126 134.406 1.00 73.68 O
ATOM 20 N1 G B 565 3.309 90.553 133.488 1.00 74.49 N
ATOM 21 C2 G B 565 4.511 90.177 132.944 1.00 74.74 C
ATOM 22 N2 G B 565 5.338 91.171 132.585 1.00 74.31 N
ATOM 23 N3 G B 565 4.876 88.919 132.764 1.00 74.48 N
ATOM 24 C4 G B 565 3.926 88.053 133.177 1.00 73.93 C
ATOM 25 P C B 566 6.855 83.969 136.843 1.00 69.82 P
ATOM 26 OP1 C B 566 8.117 83.426 137.400 1.00 71.36 O
ATOM 27 OP2 C B 566 5.569 83.298 137.156 1.00 71.15 O
ATOM 28 O5' C B 566 6.741 85.494 137.286 1.00 68.75 O
TER
Atoms:
OP1: (4.709,95.879,134.421)
OP2: (4.616,93.453,133.570)
C3': (7.632,96.029,130.183)
C1': (9.566,94.788,130.738)
C5': (6.973,96.348,132.658)
O4': (9.024,95.320,131.932)
C8: (8.072,92.719,130.848)
O2': (9.799,96.618,129.194)
C6: (10.196,90.003,130.161)
C5: (9.477,91.181,130.427)
C4: (10.195,92.362,130.438)
P: (5.408,94.652,133.958)
C4': (8.059,96.354,131.608)
C2': (8.942,95.553,129.568)
C2: (12.083,91.327,129.983)
N1: (11.523,90.116,129.938)
N3: (11.516,92.505,130.226)
N6: (9.643,88.788,130.117)
N7: (8.136,91.418,130.693)
N9: (9.279,93.355,130.690)
O5': (6.350,95.045,132.732)
O3': (7.157,97.185,129.498)
OP2: (4.616,93.453,133.570)
C3': (7.632,96.029,130.183)
C1': (9.566,94.788,130.738)
C5': (6.973,96.348,132.658)
O4': (9.024,95.320,131.932)
C8: (8.072,92.719,130.848)
O2': (9.799,96.618,129.194)
C6: (10.196,90.003,130.161)
C5: (9.477,91.181,130.427)
C4: (10.195,92.362,130.438)
P: (5.408,94.652,133.958)
C4': (8.059,96.354,131.608)
C2': (8.942,95.553,129.568)
C2: (12.083,91.327,129.983)
N1: (11.523,90.116,129.938)
N3: (11.516,92.505,130.226)
N6: (9.643,88.788,130.117)
N7: (8.136,91.418,130.693)
N9: (9.279,93.355,130.690)
O5': (6.350,95.045,132.732)
O3': (7.157,97.185,129.498)
OP1: (3.149,80.654,135.658)
OP2: (1.411,82.551,135.801)
C3': (5.915,84.572,134.473)
C1': (5.156,85.895,132.678)
C5': (4.653,82.470,133.723)
O6: (1.274,90.126,134.406)
O4': (4.735,84.553,132.463)
C8: (2.827,86.205,133.649)
C2: (4.511,90.177,132.944)
C6: (2.318,89.679,133.921)
C5: (2.694,88.328,133.728)
C4: (3.926,88.053,133.177)
P: (2.464,81.820,135.041)
C4': (5.490,83.664,133.335)
C2': (6.275,85.848,133.722)
O2': (7.525,85.769,133.061)
N1: (3.309,90.553,133.488)
N2: (5.338,91.171,132.585)
N3: (4.876,88.919,132.764)
N7: (2.011,87.156,134.016)
N9: (4.013,86.679,133.142)
O5': (3.576,82.869,134.595)
O3': (6.984,84.030,135.239)
OP2: (1.411,82.551,135.801)
C3': (5.915,84.572,134.473)
C1': (5.156,85.895,132.678)
C5': (4.653,82.470,133.723)
O6: (1.274,90.126,134.406)
O4': (4.735,84.553,132.463)
C8: (2.827,86.205,133.649)
C2: (4.511,90.177,132.944)
C6: (2.318,89.679,133.921)
C5: (2.694,88.328,133.728)
C4: (3.926,88.053,133.177)
P: (2.464,81.820,135.041)
C4': (5.490,83.664,133.335)
C2': (6.275,85.848,133.722)
O2': (7.525,85.769,133.061)
N1: (3.309,90.553,133.488)
N2: (5.338,91.171,132.585)
N3: (4.876,88.919,132.764)
N7: (2.011,87.156,134.016)
N9: (4.013,86.679,133.142)
O5': (3.576,82.869,134.595)
O3': (6.984,84.030,135.239)
Image (generated by PyMOL):