ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHY:A663:A681

Extra

PDB:
ATOM 1 O3' A A 662 85.101 23.667 -55.339 1.00108.78 O
ATOM 2 P G A 663 86.403 22.828 -55.762 1.00111.76 P
ATOM 3 OP1 G A 663 86.987 23.486 -56.958 1.00112.42 O
ATOM 4 OP2 G A 663 85.995 21.410 -55.855 1.00119.96 O
ATOM 5 O5' G A 663 87.359 23.030 -54.524 1.00100.08 O
ATOM 6 C5' G A 663 87.683 24.330 -54.068 1.00100.47 C
ATOM 7 C4' G A 663 88.419 24.261 -52.764 1.00100.12 C
ATOM 8 O4' G A 663 87.488 23.957 -51.703 1.00 98.50 O
ATOM 9 C3' G A 663 89.474 23.169 -52.675 1.00 92.44 C
ATOM 10 O3' G A 663 90.718 23.575 -53.220 1.00 99.26 O
ATOM 11 C2' G A 663 89.531 22.854 -51.187 1.00 97.05 C
ATOM 12 O2' G A 663 90.374 23.770 -50.511 1.00 94.67 O
ATOM 13 C1' G A 663 88.094 23.116 -50.751 1.00101.19 C
ATOM 14 N9 G A 663 87.301 21.880 -50.644 1.00112.45 N
ATOM 15 C8 G A 663 86.367 21.405 -51.532 1.00113.21 C
ATOM 16 N7 G A 663 85.807 20.297 -51.130 1.00114.29 N
ATOM 17 C5 G A 663 86.400 20.038 -49.902 1.00113.81 C
ATOM 18 C6 G A 663 86.201 18.973 -48.988 1.00114.50 C
ATOM 19 O6 G A 663 85.434 18.006 -49.077 1.00116.12 O
ATOM 20 N1 G A 663 87.016 19.112 -47.869 1.00114.64 N
ATOM 21 C2 G A 663 87.906 20.132 -47.641 1.00114.31 C
ATOM 22 N2 G A 663 88.595 20.075 -46.490 1.00112.76 N
ATOM 23 N3 G A 663 88.101 21.130 -48.484 1.00114.77 N
ATOM 24 C4 G A 663 87.319 21.013 -49.583 1.00114.49 C
ATOM 25 P U A 664 91.914 22.519 -53.405 1.00105.87 P
ATOM 26 OP1 U A 664 92.928 23.148 -54.283 1.00112.62 O
ATOM 27 OP2 U A 664 91.307 21.236 -53.821 1.00112.94 O
ATOM 28 O5' U A 664 92.479 22.401 -51.940 1.00 89.47 O
TER

ATOM 1 O3' A B 680 87.314 9.064 -45.480 1.00112.09 O
ATOM 2 P G B 681 86.582 10.391 -46.014 1.00123.53 P
ATOM 3 OP1 G B 681 85.463 10.689 -45.074 1.00106.25 O
ATOM 4 OP2 G B 681 86.268 10.169 -47.452 1.00100.90 O
ATOM 5 O5' G B 681 87.725 11.496 -45.868 1.00113.82 O
ATOM 6 C5' G B 681 88.130 11.971 -44.585 1.00106.47 C
ATOM 7 C4' G B 681 88.507 13.430 -44.626 1.00106.97 C
ATOM 8 O4' G B 681 89.762 13.574 -45.348 1.00100.80 O
ATOM 9 C3' G B 681 87.500 14.329 -45.331 1.00100.90 C
ATOM 10 O3' G B 681 87.507 15.623 -44.731 1.00 88.08 O
ATOM 11 C2' G B 681 88.056 14.403 -46.746 1.00107.24 C
ATOM 12 O2' G B 681 87.661 15.544 -47.471 1.00114.04 O
ATOM 13 C1' G B 681 89.569 14.370 -46.502 1.00114.01 C
ATOM 14 N9 G B 681 90.327 13.756 -47.600 1.00141.29 N
ATOM 15 C8 G B 681 89.945 12.610 -48.256 1.00141.21 C
ATOM 16 N7 G B 681 90.772 12.251 -49.196 1.00147.19 N
ATOM 17 C5 G B 681 91.771 13.214 -49.169 1.00147.80 C
ATOM 18 C6 G B 681 92.937 13.337 -49.967 1.00147.02 C
ATOM 19 O6 G B 681 93.331 12.604 -50.878 1.00149.49 O
ATOM 20 N1 G B 681 93.679 14.451 -49.624 1.00146.91 N
ATOM 21 C2 G B 681 93.348 15.330 -48.631 1.00146.97 C
ATOM 22 N2 G B 681 94.204 16.343 -48.453 1.00146.46 N
ATOM 23 N3 G B 681 92.265 15.231 -47.874 1.00146.82 N
ATOM 24 C4 G B 681 91.515 14.154 -48.191 1.00145.89 C
ATOM 25 P A B 682 86.177 16.521 -44.751 1.00101.54 P
ATOM 26 OP1 A B 682 85.018 15.595 -44.858 1.00107.79 O
ATOM 27 OP2 A B 682 86.358 17.548 -45.802 1.00117.73 O
ATOM 28 O5' A B 682 86.183 17.216 -43.326 1.00 87.23 O
TER

Atoms:
OP1: (86.987,23.486,-56.958)
OP2: (85.995,21.410,-55.855)
C3': (89.474,23.169,-52.675)
C1': (88.094,23.116,-50.751)
C5': (87.683,24.330,-54.068)
O6: (85.434,18.006,-49.077)
O4': (87.488,23.957,-51.703)
C8: (86.367,21.405,-51.532)
C2: (87.906,20.132,-47.641)
C6: (86.201,18.973,-48.988)
C5: (86.400,20.038,-49.902)
C4: (87.319,21.013,-49.583)
P: (86.403,22.828,-55.762)
C4': (88.419,24.261,-52.764)
C2': (89.531,22.854,-51.187)
O2': (90.374,23.770,-50.511)
N1: (87.016,19.112,-47.869)
N2: (88.595,20.075,-46.490)
N3: (88.101,21.130,-48.484)
N7: (85.807,20.297,-51.130)
N9: (87.301,21.880,-50.644)
O5': (87.359,23.030,-54.524)
O3': (90.718,23.575,-53.220)
OP1: (85.463,10.689,-45.074)
OP2: (86.268,10.169,-47.452)
C3': (87.500,14.329,-45.331)
C1': (89.569,14.370,-46.502)
C5': (88.130,11.971,-44.585)
O6: (93.331,12.604,-50.878)
O4': (89.762,13.574,-45.348)
C8: (89.945,12.610,-48.256)
C2: (93.348,15.330,-48.631)
C6: (92.937,13.337,-49.967)
C5: (91.771,13.214,-49.169)
C4: (91.515,14.154,-48.191)
P: (86.582,10.391,-46.014)
C4': (88.507,13.430,-44.626)
C2': (88.056,14.403,-46.746)
O2': (87.661,15.544,-47.471)
N1: (93.679,14.451,-49.624)
N2: (94.204,16.343,-48.453)
N3: (92.265,15.231,-47.874)
N7: (90.772,12.251,-49.196)
N9: (90.327,13.756,-47.600)
O5': (87.725,11.496,-45.868)
O3': (87.507,15.623,-44.731)
Image (generated by PyMOL):
PyMOL image
show in jmol