ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5B:2841:2842

Extra

PDB:
ATOM 1 O3' G A 840 -75.803 50.185 130.017 1.00 95.13 O
ATOM 2 P A A 841 -76.074 48.627 130.327 1.00100.66 P
ATOM 3 OP1 A A 841 -76.982 48.120 129.266 1.00100.26 O
ATOM 4 OP2 A A 841 -76.495 48.525 131.755 1.00102.22 O
ATOM 5 O5' A A 841 -74.646 47.977 130.143 1.00 99.33 O
ATOM 6 C5' A A 841 -74.039 47.942 128.865 1.00 97.79 C
ATOM 7 C4' A A 841 -73.248 46.678 128.654 1.00 96.79 C
ATOM 8 O4' A A 841 -72.185 46.601 129.642 1.00 96.93 O
ATOM 9 C3' A A 841 -74.043 45.371 128.765 1.00 97.17 C
ATOM 10 O3' A A 841 -73.683 44.509 127.693 1.00 95.86 O
ATOM 11 C2' A A 841 -73.559 44.773 130.089 1.00 97.90 C
ATOM 12 O2' A A 841 -73.605 43.364 130.141 1.00 97.74 O
ATOM 13 C1' A A 841 -72.129 45.290 130.141 1.00 97.09 C
ATOM 14 N9 A A 841 -71.515 45.303 131.473 1.00 97.90 N
ATOM 15 C8 A A 841 -72.091 45.179 132.697 1.00 99.38 C
ATOM 16 N7 A A 841 -71.218 45.190 133.672 1.00 99.75 N
ATOM 17 C5 A A 841 -69.984 45.311 133.058 1.00 98.41 C
ATOM 18 C6 A A 841 -68.661 45.380 133.554 1.00 98.09 C
ATOM 19 N6 A A 841 -68.376 45.327 134.858 1.00 99.17 N
ATOM 20 N1 A A 841 -67.640 45.489 132.657 1.00 96.65 N
ATOM 21 C2 A A 841 -67.947 45.537 131.352 1.00 95.63 C
ATOM 22 N3 A A 841 -69.141 45.485 130.763 1.00 95.80 N
ATOM 23 C4 A A 841 -70.142 45.370 131.685 1.00 97.23 C
ATOM 24 P U A 842 -74.581 44.465 126.365 1.00 96.49 P
ATOM 25 OP1 U A 842 -73.717 43.967 125.271 1.00 94.93 O
ATOM 26 OP2 U A 842 -75.224 45.793 126.217 1.00 97.07 O
ATOM 27 O5' U A 842 -75.674 43.369 126.728 1.00 97.37 O
TER

ATOM 1 O3' A B 841 -73.683 44.509 127.693 1.00 95.86 O
ATOM 2 P U B 842 -74.581 44.465 126.365 1.00 96.49 P
ATOM 3 OP1 U B 842 -73.717 43.967 125.271 1.00 94.93 O
ATOM 4 OP2 U B 842 -75.224 45.793 126.217 1.00 97.07 O
ATOM 5 O5' U B 842 -75.674 43.369 126.728 1.00 97.37 O
ATOM 6 C5' U B 842 -76.906 43.720 127.348 1.00 98.83 C
ATOM 7 C4' U B 842 -77.995 42.760 126.947 1.00 99.13 C
ATOM 8 O4' U B 842 -78.079 42.729 125.500 1.00 98.01 O
ATOM 9 C3' U B 842 -77.771 41.303 127.345 1.00 99.09 C
ATOM 10 O3' U B 842 -78.199 41.014 128.672 1.00100.50 O
ATOM 11 C2' U B 842 -78.531 40.528 126.274 1.00 98.67 C
ATOM 12 O2' U B 842 -79.919 40.469 126.585 1.00 99.96 O
ATOM 13 C1' U B 842 -78.352 41.421 125.052 1.00 97.66 C
ATOM 14 N1 U B 842 -77.247 40.973 124.156 1.00 96.08 N
ATOM 15 C2 U B 842 -77.485 39.858 123.370 1.00 95.51 C
ATOM 16 O2 U B 842 -78.527 39.226 123.423 1.00 96.25 O
ATOM 17 N3 U B 842 -76.463 39.494 122.523 1.00 94.09 N
ATOM 18 C4 U B 842 -75.248 40.126 122.368 1.00 93.18 C
ATOM 19 O4 U B 842 -74.441 39.660 121.565 1.00 91.98 O
ATOM 20 C5 U B 842 -75.066 41.277 123.198 1.00 93.83 C
ATOM 21 C6 U B 842 -76.050 41.653 124.030 1.00 95.21 C
ATOM 22 P U B 843 -77.920 39.560 129.326 1.00 95.69 P
ATOM 23 OP1 U B 843 -78.303 39.649 130.769 1.00 97.27 O
ATOM 24 OP2 U B 843 -76.522 39.173 128.971 1.00 94.34 O
ATOM 25 O5' U B 843 -78.952 38.621 128.555 1.00 95.69 O
TER

Atoms:
OP1: (-76.982,48.120,129.266)
OP2: (-76.495,48.525,131.755)
C3': (-74.043,45.371,128.765)
C1': (-72.129,45.290,130.141)
C5': (-74.039,47.942,128.865)
O4': (-72.185,46.601,129.642)
C8: (-72.091,45.179,132.697)
O2': (-73.605,43.364,130.141)
C6: (-68.661,45.380,133.554)
C5: (-69.984,45.311,133.058)
C4: (-70.142,45.370,131.685)
P: (-76.074,48.627,130.327)
C4': (-73.248,46.678,128.654)
C2': (-73.559,44.773,130.089)
C2: (-67.947,45.537,131.352)
N1: (-67.640,45.489,132.657)
N3: (-69.141,45.485,130.763)
N6: (-68.376,45.327,134.858)
N7: (-71.218,45.190,133.672)
N9: (-71.515,45.303,131.473)
O5': (-74.646,47.977,130.143)
O3': (-73.683,44.509,127.693)
C4: (-75.248,40.126,122.368)
N3: (-76.463,39.494,122.523)
OP1: (-73.717,43.967,125.271)
OP2: (-75.224,45.793,126.217)
C2: (-77.485,39.858,123.370)
C1': (-78.352,41.421,125.052)
C3': (-77.771,41.303,127.345)
O5': (-75.674,43.369,126.728)
O4': (-78.079,42.729,125.500)
C5': (-76.906,43.720,127.348)
P: (-74.581,44.465,126.365)
C4': (-77.995,42.760,126.947)
C2': (-78.531,40.528,126.274)
O2': (-79.919,40.469,126.585)
N1: (-77.247,40.973,124.156)
O4: (-74.441,39.660,121.565)
O2: (-78.527,39.226,123.423)
C6: (-76.050,41.653,124.030)
C5: (-75.066,41.277,123.198)
O3': (-78.199,41.014,128.672)
Image (generated by PyMOL):
PyMOL image
show in jmol