Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2628:A2629
Extra
PDB:
ATOM 1 O3' A A2627 48.603 101.908 167.521 1.00 48.44 O
ATOM 2 P U A2628 48.269 103.436 167.206 1.00 48.80 P
ATOM 3 OP1 U A2628 49.502 104.238 167.413 1.00 47.59 O
ATOM 4 OP2 U A2628 47.027 103.787 167.942 1.00 49.07 O
ATOM 5 O5' U A2628 47.941 103.409 165.652 1.00 46.99 O
ATOM 6 C5' U A2628 48.987 103.206 164.702 1.00 44.79 C
ATOM 7 C4' U A2628 48.414 103.100 163.321 1.00 44.77 C
ATOM 8 O4' U A2628 47.439 102.032 163.282 1.00 43.48 O
ATOM 9 C3' U A2628 47.627 104.309 162.863 1.00 43.47 C
ATOM 10 O3' U A2628 48.503 105.300 162.391 1.00 43.49 O
ATOM 11 C2' U A2628 46.779 103.720 161.750 1.00 42.92 C
ATOM 12 O2' U A2628 47.492 103.508 160.547 1.00 40.78 O
ATOM 13 C1' U A2628 46.424 102.366 162.357 1.00 42.73 C
ATOM 14 N1 U A2628 45.140 102.395 163.062 1.00 43.44 N
ATOM 15 C2 U A2628 44.028 101.991 162.356 1.00 45.43 C
ATOM 16 O2 U A2628 44.081 101.652 161.165 1.00 44.11 O
ATOM 17 N3 U A2628 42.853 102.005 163.080 1.00 44.86 N
ATOM 18 C4 U A2628 42.687 102.389 164.390 1.00 43.42 C
ATOM 19 O4 U A2628 41.552 102.416 164.868 1.00 42.95 O
ATOM 20 C5 U A2628 43.889 102.810 165.039 1.00 42.94 C
ATOM 21 C6 U A2628 45.042 102.799 164.370 1.00 42.20 C
ATOM 22 P C A2629 48.682 106.659 163.213 1.00 44.84 P
ATOM 23 OP1 C A2629 50.138 106.914 163.208 1.00 45.75 O
ATOM 24 OP2 C A2629 47.945 106.628 164.504 1.00 45.51 O
ATOM 25 O5' C A2629 47.979 107.739 162.288 1.00 45.42 O
TER
ATOM 1 O3' U B2628 48.503 105.300 162.391 1.00 43.49 O
ATOM 2 P C B2629 48.682 106.659 163.213 1.00 44.84 P
ATOM 3 OP1 C B2629 50.138 106.914 163.208 1.00 45.75 O
ATOM 4 OP2 C B2629 47.945 106.628 164.504 1.00 45.51 O
ATOM 5 O5' C B2629 47.979 107.739 162.288 1.00 45.42 O
ATOM 6 C5' C B2629 46.568 107.985 162.365 1.00 43.58 C
ATOM 7 C4' C B2629 46.110 108.645 161.099 1.00 43.17 C
ATOM 8 O4' C B2629 46.866 109.868 160.932 1.00 42.72 O
ATOM 9 C3' C B2629 46.358 107.854 159.824 1.00 41.59 C
ATOM 10 O3' C B2629 45.275 106.933 159.623 1.00 41.99 O
ATOM 11 C2' C B2629 46.422 108.968 158.786 1.00 42.03 C
ATOM 12 O2' C B2629 45.145 109.494 158.512 1.00 41.48 O
ATOM 13 C1' C B2629 47.136 110.072 159.565 1.00 43.36 C
ATOM 14 N1 C B2629 48.598 110.217 159.391 1.00 46.12 N
ATOM 15 C2 C B2629 49.094 110.820 158.221 1.00 47.83 C
ATOM 16 O2 C B2629 48.312 111.095 157.295 1.00 50.53 O
ATOM 17 N3 C B2629 50.416 111.086 158.127 1.00 48.26 N
ATOM 18 C4 C B2629 51.235 110.768 159.133 1.00 48.09 C
ATOM 19 N4 C B2629 52.522 111.136 159.040 1.00 47.83 N
ATOM 20 C5 C B2629 50.771 110.084 160.291 1.00 47.39 C
ATOM 21 C6 C B2629 49.463 109.824 160.375 1.00 46.33 C
ATOM 22 P U B2630 45.480 105.598 158.742 1.00 43.40 P
ATOM 23 OP1 U B2630 44.536 104.595 159.260 1.00 44.39 O
ATOM 24 OP2 U B2630 46.910 105.243 158.569 1.00 42.70 O
ATOM 25 O5' U B2630 44.920 105.994 157.316 1.00 44.31 O
TER
ATOM 2 P U A2628 48.269 103.436 167.206 1.00 48.80 P
ATOM 3 OP1 U A2628 49.502 104.238 167.413 1.00 47.59 O
ATOM 4 OP2 U A2628 47.027 103.787 167.942 1.00 49.07 O
ATOM 5 O5' U A2628 47.941 103.409 165.652 1.00 46.99 O
ATOM 6 C5' U A2628 48.987 103.206 164.702 1.00 44.79 C
ATOM 7 C4' U A2628 48.414 103.100 163.321 1.00 44.77 C
ATOM 8 O4' U A2628 47.439 102.032 163.282 1.00 43.48 O
ATOM 9 C3' U A2628 47.627 104.309 162.863 1.00 43.47 C
ATOM 10 O3' U A2628 48.503 105.300 162.391 1.00 43.49 O
ATOM 11 C2' U A2628 46.779 103.720 161.750 1.00 42.92 C
ATOM 12 O2' U A2628 47.492 103.508 160.547 1.00 40.78 O
ATOM 13 C1' U A2628 46.424 102.366 162.357 1.00 42.73 C
ATOM 14 N1 U A2628 45.140 102.395 163.062 1.00 43.44 N
ATOM 15 C2 U A2628 44.028 101.991 162.356 1.00 45.43 C
ATOM 16 O2 U A2628 44.081 101.652 161.165 1.00 44.11 O
ATOM 17 N3 U A2628 42.853 102.005 163.080 1.00 44.86 N
ATOM 18 C4 U A2628 42.687 102.389 164.390 1.00 43.42 C
ATOM 19 O4 U A2628 41.552 102.416 164.868 1.00 42.95 O
ATOM 20 C5 U A2628 43.889 102.810 165.039 1.00 42.94 C
ATOM 21 C6 U A2628 45.042 102.799 164.370 1.00 42.20 C
ATOM 22 P C A2629 48.682 106.659 163.213 1.00 44.84 P
ATOM 23 OP1 C A2629 50.138 106.914 163.208 1.00 45.75 O
ATOM 24 OP2 C A2629 47.945 106.628 164.504 1.00 45.51 O
ATOM 25 O5' C A2629 47.979 107.739 162.288 1.00 45.42 O
TER
ATOM 1 O3' U B2628 48.503 105.300 162.391 1.00 43.49 O
ATOM 2 P C B2629 48.682 106.659 163.213 1.00 44.84 P
ATOM 3 OP1 C B2629 50.138 106.914 163.208 1.00 45.75 O
ATOM 4 OP2 C B2629 47.945 106.628 164.504 1.00 45.51 O
ATOM 5 O5' C B2629 47.979 107.739 162.288 1.00 45.42 O
ATOM 6 C5' C B2629 46.568 107.985 162.365 1.00 43.58 C
ATOM 7 C4' C B2629 46.110 108.645 161.099 1.00 43.17 C
ATOM 8 O4' C B2629 46.866 109.868 160.932 1.00 42.72 O
ATOM 9 C3' C B2629 46.358 107.854 159.824 1.00 41.59 C
ATOM 10 O3' C B2629 45.275 106.933 159.623 1.00 41.99 O
ATOM 11 C2' C B2629 46.422 108.968 158.786 1.00 42.03 C
ATOM 12 O2' C B2629 45.145 109.494 158.512 1.00 41.48 O
ATOM 13 C1' C B2629 47.136 110.072 159.565 1.00 43.36 C
ATOM 14 N1 C B2629 48.598 110.217 159.391 1.00 46.12 N
ATOM 15 C2 C B2629 49.094 110.820 158.221 1.00 47.83 C
ATOM 16 O2 C B2629 48.312 111.095 157.295 1.00 50.53 O
ATOM 17 N3 C B2629 50.416 111.086 158.127 1.00 48.26 N
ATOM 18 C4 C B2629 51.235 110.768 159.133 1.00 48.09 C
ATOM 19 N4 C B2629 52.522 111.136 159.040 1.00 47.83 N
ATOM 20 C5 C B2629 50.771 110.084 160.291 1.00 47.39 C
ATOM 21 C6 C B2629 49.463 109.824 160.375 1.00 46.33 C
ATOM 22 P U B2630 45.480 105.598 158.742 1.00 43.40 P
ATOM 23 OP1 U B2630 44.536 104.595 159.260 1.00 44.39 O
ATOM 24 OP2 U B2630 46.910 105.243 158.569 1.00 42.70 O
ATOM 25 O5' U B2630 44.920 105.994 157.316 1.00 44.31 O
TER
Atoms:
C4: (42.687,102.389,164.390)
N3: (42.853,102.005,163.080)
OP1: (49.502,104.238,167.413)
OP2: (47.027,103.787,167.942)
C2: (44.028,101.991,162.356)
C1': (46.424,102.366,162.357)
C3': (47.627,104.309,162.863)
O5': (47.941,103.409,165.652)
O4': (47.439,102.032,163.282)
C5': (48.987,103.206,164.702)
P: (48.269,103.436,167.206)
C4': (48.414,103.100,163.321)
C2': (46.779,103.720,161.750)
O2': (47.492,103.508,160.547)
N1: (45.140,102.395,163.062)
O4: (41.552,102.416,164.868)
O2: (44.081,101.652,161.165)
C6: (45.042,102.799,164.370)
C5: (43.889,102.810,165.039)
O3': (48.503,105.300,162.391)
N3: (42.853,102.005,163.080)
OP1: (49.502,104.238,167.413)
OP2: (47.027,103.787,167.942)
C2: (44.028,101.991,162.356)
C1': (46.424,102.366,162.357)
C3': (47.627,104.309,162.863)
O5': (47.941,103.409,165.652)
O4': (47.439,102.032,163.282)
C5': (48.987,103.206,164.702)
P: (48.269,103.436,167.206)
C4': (48.414,103.100,163.321)
C2': (46.779,103.720,161.750)
O2': (47.492,103.508,160.547)
N1: (45.140,102.395,163.062)
O4: (41.552,102.416,164.868)
O2: (44.081,101.652,161.165)
C6: (45.042,102.799,164.370)
C5: (43.889,102.810,165.039)
O3': (48.503,105.300,162.391)
C2: (49.094,110.820,158.221)
OP1: (50.138,106.914,163.208)
OP2: (47.945,106.628,164.504)
C4: (51.235,110.768,159.133)
O5': (47.979,107.739,162.288)
C3': (46.358,107.854,159.824)
C1': (47.136,110.072,159.565)
O4': (46.866,109.868,160.932)
C5': (46.568,107.985,162.365)
P: (48.682,106.659,163.213)
O2: (48.312,111.095,157.295)
C4': (46.110,108.645,161.099)
C2': (46.422,108.968,158.786)
O2': (45.145,109.494,158.512)
N1: (48.598,110.217,159.391)
N3: (50.416,111.086,158.127)
N4: (52.522,111.136,159.040)
C6: (49.463,109.824,160.375)
C5: (50.771,110.084,160.291)
O3': (45.275,106.933,159.623)
OP1: (50.138,106.914,163.208)
OP2: (47.945,106.628,164.504)
C4: (51.235,110.768,159.133)
O5': (47.979,107.739,162.288)
C3': (46.358,107.854,159.824)
C1': (47.136,110.072,159.565)
O4': (46.866,109.868,160.932)
C5': (46.568,107.985,162.365)
P: (48.682,106.659,163.213)
O2: (48.312,111.095,157.295)
C4': (46.110,108.645,161.099)
C2': (46.422,108.968,158.786)
O2': (45.145,109.494,158.512)
N1: (48.598,110.217,159.391)
N3: (50.416,111.086,158.127)
N4: (52.522,111.136,159.040)
C6: (49.463,109.824,160.375)
C5: (50.771,110.084,160.291)
O3': (45.275,106.933,159.623)
Image (generated by PyMOL):