Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02628:02629
Extra
PDB:
ATOM 1 O3' A A2627 48.579 101.766 167.112 1.00 52.53 O
ATOM 2 P U A2628 48.250 103.308 166.839 1.00 53.68 P
ATOM 3 OP1 U A2628 49.486 104.094 167.074 1.00 53.27 O
ATOM 4 OP2 U A2628 47.019 103.642 167.593 1.00 54.51 O
ATOM 5 O5' U A2628 47.907 103.341 165.282 1.00 52.54 O
ATOM 6 C5' U A2628 48.911 103.005 164.313 1.00 50.37 C
ATOM 7 C4' U A2628 48.319 102.956 162.928 1.00 48.74 C
ATOM 8 O4' U A2628 47.336 101.894 162.851 1.00 48.37 O
ATOM 9 C3' U A2628 47.565 104.192 162.475 1.00 47.51 C
ATOM 10 O3' U A2628 48.459 105.191 162.004 1.00 47.61 O
ATOM 11 C2' U A2628 46.693 103.628 161.361 1.00 46.77 C
ATOM 12 O2' U A2628 47.405 103.432 160.158 1.00 45.49 O
ATOM 13 C1' U A2628 46.317 102.261 161.941 1.00 46.63 C
ATOM 14 N1 U A2628 45.041 102.306 162.666 1.00 48.27 N
ATOM 15 C2 U A2628 43.893 102.032 161.952 1.00 49.01 C
ATOM 16 O2 U A2628 43.905 101.711 160.775 1.00 49.38 O
ATOM 17 N3 U A2628 42.726 102.145 162.669 1.00 49.81 N
ATOM 18 C4 U A2628 42.598 102.485 163.997 1.00 48.88 C
ATOM 19 O4 U A2628 41.476 102.586 164.488 1.00 50.33 O
ATOM 20 C5 U A2628 43.832 102.729 164.673 1.00 48.56 C
ATOM 21 C6 U A2628 44.983 102.632 164.005 1.00 48.07 C
ATOM 22 P C A2629 48.621 106.567 162.815 1.00 48.91 P
ATOM 23 OP1 C A2629 50.063 106.890 162.865 1.00 50.09 O
ATOM 24 OP2 C A2629 47.852 106.440 164.082 1.00 52.40 O
ATOM 25 O5' C A2629 47.918 107.667 161.902 1.00 47.07 O
TER
ATOM 1 O3' U B2628 48.459 105.191 162.004 1.00 47.61 O
ATOM 2 P C B2629 48.621 106.567 162.815 1.00 48.91 P
ATOM 3 OP1 C B2629 50.063 106.890 162.865 1.00 50.09 O
ATOM 4 OP2 C B2629 47.852 106.440 164.082 1.00 52.40 O
ATOM 5 O5' C B2629 47.918 107.667 161.902 1.00 47.07 O
ATOM 6 C5' C B2629 46.508 107.934 162.002 1.00 46.07 C
ATOM 7 C4' C B2629 46.012 108.577 160.730 1.00 46.45 C
ATOM 8 O4' C B2629 46.693 109.839 160.533 1.00 46.78 O
ATOM 9 C3' C B2629 46.280 107.777 159.466 1.00 46.43 C
ATOM 10 O3' C B2629 45.202 106.862 159.266 1.00 45.24 O
ATOM 11 C2' C B2629 46.348 108.859 158.395 1.00 46.86 C
ATOM 12 O2' C B2629 45.070 109.283 157.984 1.00 50.21 O
ATOM 13 C1' C B2629 46.987 110.018 159.163 1.00 46.29 C
ATOM 14 N1 C B2629 48.448 110.198 159.022 1.00 47.95 N
ATOM 15 C2 C B2629 48.965 110.686 157.807 1.00 48.99 C
ATOM 16 O2 C B2629 48.194 110.863 156.845 1.00 51.06 O
ATOM 17 N3 C B2629 50.291 110.947 157.713 1.00 48.75 N
ATOM 18 C4 C B2629 51.093 110.728 158.760 1.00 48.63 C
ATOM 19 N4 C B2629 52.390 111.049 158.636 1.00 46.19 N
ATOM 20 C5 C B2629 50.603 110.183 159.983 1.00 48.18 C
ATOM 21 C6 C B2629 49.290 109.932 160.068 1.00 47.06 C
ATOM 22 P U B2630 45.425 105.517 158.418 1.00 46.88 P
ATOM 23 OP1 U B2630 44.521 104.483 158.988 1.00 45.42 O
ATOM 24 OP2 U B2630 46.880 105.230 158.308 1.00 45.09 O
ATOM 25 O5' U B2630 44.866 105.911 156.976 1.00 46.10 O
TER
ATOM 2 P U A2628 48.250 103.308 166.839 1.00 53.68 P
ATOM 3 OP1 U A2628 49.486 104.094 167.074 1.00 53.27 O
ATOM 4 OP2 U A2628 47.019 103.642 167.593 1.00 54.51 O
ATOM 5 O5' U A2628 47.907 103.341 165.282 1.00 52.54 O
ATOM 6 C5' U A2628 48.911 103.005 164.313 1.00 50.37 C
ATOM 7 C4' U A2628 48.319 102.956 162.928 1.00 48.74 C
ATOM 8 O4' U A2628 47.336 101.894 162.851 1.00 48.37 O
ATOM 9 C3' U A2628 47.565 104.192 162.475 1.00 47.51 C
ATOM 10 O3' U A2628 48.459 105.191 162.004 1.00 47.61 O
ATOM 11 C2' U A2628 46.693 103.628 161.361 1.00 46.77 C
ATOM 12 O2' U A2628 47.405 103.432 160.158 1.00 45.49 O
ATOM 13 C1' U A2628 46.317 102.261 161.941 1.00 46.63 C
ATOM 14 N1 U A2628 45.041 102.306 162.666 1.00 48.27 N
ATOM 15 C2 U A2628 43.893 102.032 161.952 1.00 49.01 C
ATOM 16 O2 U A2628 43.905 101.711 160.775 1.00 49.38 O
ATOM 17 N3 U A2628 42.726 102.145 162.669 1.00 49.81 N
ATOM 18 C4 U A2628 42.598 102.485 163.997 1.00 48.88 C
ATOM 19 O4 U A2628 41.476 102.586 164.488 1.00 50.33 O
ATOM 20 C5 U A2628 43.832 102.729 164.673 1.00 48.56 C
ATOM 21 C6 U A2628 44.983 102.632 164.005 1.00 48.07 C
ATOM 22 P C A2629 48.621 106.567 162.815 1.00 48.91 P
ATOM 23 OP1 C A2629 50.063 106.890 162.865 1.00 50.09 O
ATOM 24 OP2 C A2629 47.852 106.440 164.082 1.00 52.40 O
ATOM 25 O5' C A2629 47.918 107.667 161.902 1.00 47.07 O
TER
ATOM 1 O3' U B2628 48.459 105.191 162.004 1.00 47.61 O
ATOM 2 P C B2629 48.621 106.567 162.815 1.00 48.91 P
ATOM 3 OP1 C B2629 50.063 106.890 162.865 1.00 50.09 O
ATOM 4 OP2 C B2629 47.852 106.440 164.082 1.00 52.40 O
ATOM 5 O5' C B2629 47.918 107.667 161.902 1.00 47.07 O
ATOM 6 C5' C B2629 46.508 107.934 162.002 1.00 46.07 C
ATOM 7 C4' C B2629 46.012 108.577 160.730 1.00 46.45 C
ATOM 8 O4' C B2629 46.693 109.839 160.533 1.00 46.78 O
ATOM 9 C3' C B2629 46.280 107.777 159.466 1.00 46.43 C
ATOM 10 O3' C B2629 45.202 106.862 159.266 1.00 45.24 O
ATOM 11 C2' C B2629 46.348 108.859 158.395 1.00 46.86 C
ATOM 12 O2' C B2629 45.070 109.283 157.984 1.00 50.21 O
ATOM 13 C1' C B2629 46.987 110.018 159.163 1.00 46.29 C
ATOM 14 N1 C B2629 48.448 110.198 159.022 1.00 47.95 N
ATOM 15 C2 C B2629 48.965 110.686 157.807 1.00 48.99 C
ATOM 16 O2 C B2629 48.194 110.863 156.845 1.00 51.06 O
ATOM 17 N3 C B2629 50.291 110.947 157.713 1.00 48.75 N
ATOM 18 C4 C B2629 51.093 110.728 158.760 1.00 48.63 C
ATOM 19 N4 C B2629 52.390 111.049 158.636 1.00 46.19 N
ATOM 20 C5 C B2629 50.603 110.183 159.983 1.00 48.18 C
ATOM 21 C6 C B2629 49.290 109.932 160.068 1.00 47.06 C
ATOM 22 P U B2630 45.425 105.517 158.418 1.00 46.88 P
ATOM 23 OP1 U B2630 44.521 104.483 158.988 1.00 45.42 O
ATOM 24 OP2 U B2630 46.880 105.230 158.308 1.00 45.09 O
ATOM 25 O5' U B2630 44.866 105.911 156.976 1.00 46.10 O
TER
Atoms:
C4: (42.598,102.485,163.997)
N3: (42.726,102.145,162.669)
OP1: (49.486,104.094,167.074)
OP2: (47.019,103.642,167.593)
C2: (43.893,102.032,161.952)
C1': (46.317,102.261,161.941)
C3': (47.565,104.192,162.475)
O5': (47.907,103.341,165.282)
O4': (47.336,101.894,162.851)
C5': (48.911,103.005,164.313)
P: (48.250,103.308,166.839)
C4': (48.319,102.956,162.928)
C2': (46.693,103.628,161.361)
O2': (47.405,103.432,160.158)
N1: (45.041,102.306,162.666)
O4: (41.476,102.586,164.488)
O2: (43.905,101.711,160.775)
C6: (44.983,102.632,164.005)
C5: (43.832,102.729,164.673)
O3': (48.459,105.191,162.004)
N3: (42.726,102.145,162.669)
OP1: (49.486,104.094,167.074)
OP2: (47.019,103.642,167.593)
C2: (43.893,102.032,161.952)
C1': (46.317,102.261,161.941)
C3': (47.565,104.192,162.475)
O5': (47.907,103.341,165.282)
O4': (47.336,101.894,162.851)
C5': (48.911,103.005,164.313)
P: (48.250,103.308,166.839)
C4': (48.319,102.956,162.928)
C2': (46.693,103.628,161.361)
O2': (47.405,103.432,160.158)
N1: (45.041,102.306,162.666)
O4: (41.476,102.586,164.488)
O2: (43.905,101.711,160.775)
C6: (44.983,102.632,164.005)
C5: (43.832,102.729,164.673)
O3': (48.459,105.191,162.004)
C2: (48.965,110.686,157.807)
OP1: (50.063,106.890,162.865)
OP2: (47.852,106.440,164.082)
C4: (51.093,110.728,158.760)
O5': (47.918,107.667,161.902)
C3': (46.280,107.777,159.466)
C1': (46.987,110.018,159.163)
O4': (46.693,109.839,160.533)
C5': (46.508,107.934,162.002)
P: (48.621,106.567,162.815)
O2: (48.194,110.863,156.845)
C4': (46.012,108.577,160.730)
C2': (46.348,108.859,158.395)
O2': (45.070,109.283,157.984)
N1: (48.448,110.198,159.022)
N3: (50.291,110.947,157.713)
N4: (52.390,111.049,158.636)
C6: (49.290,109.932,160.068)
C5: (50.603,110.183,159.983)
O3': (45.202,106.862,159.266)
OP1: (50.063,106.890,162.865)
OP2: (47.852,106.440,164.082)
C4: (51.093,110.728,158.760)
O5': (47.918,107.667,161.902)
C3': (46.280,107.777,159.466)
C1': (46.987,110.018,159.163)
O4': (46.693,109.839,160.533)
C5': (46.508,107.934,162.002)
P: (48.621,106.567,162.815)
O2: (48.194,110.863,156.845)
C4': (46.012,108.577,160.730)
C2': (46.348,108.859,158.395)
O2': (45.070,109.283,157.984)
N1: (48.448,110.198,159.022)
N3: (50.291,110.947,157.713)
N4: (52.390,111.049,158.636)
C6: (49.290,109.932,160.068)
C5: (50.603,110.183,159.983)
O3': (45.202,106.862,159.266)
Image (generated by PyMOL):