Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:02628:02629
Extra
PDB:
ATOM 1 O3' A A2627 48.633 101.687 167.006 1.00 50.07 O
ATOM 2 P U A2628 48.318 103.215 166.656 1.00 50.48 P
ATOM 3 OP1 U A2628 49.570 104.000 166.806 1.00 50.04 O
ATOM 4 OP2 U A2628 47.108 103.614 167.417 1.00 49.91 O
ATOM 5 O5' U A2628 47.944 103.160 165.110 1.00 49.95 O
ATOM 6 C5' U A2628 48.922 102.762 164.141 1.00 48.83 C
ATOM 7 C4' U A2628 48.310 102.721 162.766 1.00 48.71 C
ATOM 8 O4' U A2628 47.307 101.674 162.699 1.00 48.83 O
ATOM 9 C3' U A2628 47.569 103.971 162.338 1.00 47.23 C
ATOM 10 O3' U A2628 48.478 104.955 161.866 1.00 46.49 O
ATOM 11 C2' U A2628 46.666 103.431 161.238 1.00 48.16 C
ATOM 12 O2' U A2628 47.351 103.215 160.021 1.00 48.59 O
ATOM 13 C1' U A2628 46.274 102.069 161.817 1.00 48.59 C
ATOM 14 N1 U A2628 45.015 102.123 162.572 1.00 51.03 N
ATOM 15 C2 U A2628 43.841 101.847 161.890 1.00 52.15 C
ATOM 16 O2 U A2628 43.814 101.537 160.706 1.00 51.76 O
ATOM 17 N3 U A2628 42.700 101.947 162.648 1.00 52.43 N
ATOM 18 C4 U A2628 42.615 102.281 163.980 1.00 51.43 C
ATOM 19 O4 U A2628 41.512 102.355 164.513 1.00 52.57 O
ATOM 20 C5 U A2628 43.867 102.536 164.612 1.00 51.68 C
ATOM 21 C6 U A2628 44.995 102.450 163.908 1.00 50.97 C
ATOM 22 P C A2629 48.657 106.329 162.674 1.00 47.24 P
ATOM 23 OP1 C A2629 50.100 106.630 162.772 1.00 47.94 O
ATOM 24 OP2 C A2629 47.842 106.222 163.912 1.00 50.53 O
ATOM 25 O5' C A2629 47.999 107.438 161.743 1.00 45.74 O
TER
ATOM 1 O3' U B2628 48.478 104.955 161.866 1.00 46.49 O
ATOM 2 P C B2629 48.657 106.329 162.674 1.00 47.24 P
ATOM 3 OP1 C B2629 50.100 106.630 162.772 1.00 47.94 O
ATOM 4 OP2 C B2629 47.842 106.222 163.912 1.00 50.53 O
ATOM 5 O5' C B2629 47.999 107.438 161.743 1.00 45.74 O
ATOM 6 C5' C B2629 46.611 107.784 161.874 1.00 45.07 C
ATOM 7 C4' C B2629 46.123 108.444 160.611 1.00 46.01 C
ATOM 8 O4' C B2629 46.828 109.692 160.429 1.00 46.39 O
ATOM 9 C3' C B2629 46.367 107.655 159.334 1.00 45.89 C
ATOM 10 O3' C B2629 45.280 106.739 159.136 1.00 44.22 O
ATOM 11 C2' C B2629 46.434 108.753 158.277 1.00 46.19 C
ATOM 12 O2' C B2629 45.165 109.207 157.876 1.00 48.43 O
ATOM 13 C1' C B2629 47.083 109.899 159.056 1.00 46.70 C
ATOM 14 N1 C B2629 48.533 110.113 158.874 1.00 49.40 N
ATOM 15 C2 C B2629 48.998 110.636 157.656 1.00 52.09 C
ATOM 16 O2 C B2629 48.189 110.819 156.723 1.00 53.63 O
ATOM 17 N3 C B2629 50.316 110.930 157.527 1.00 52.76 N
ATOM 18 C4 C B2629 51.154 110.712 158.545 1.00 52.06 C
ATOM 19 N4 C B2629 52.437 111.070 158.391 1.00 51.31 N
ATOM 20 C5 C B2629 50.715 110.133 159.769 1.00 50.96 C
ATOM 21 C6 C B2629 49.413 109.848 159.887 1.00 49.57 C
ATOM 22 P U B2630 45.493 105.379 158.300 1.00 44.44 P
ATOM 23 OP1 U B2630 44.578 104.358 158.881 1.00 42.66 O
ATOM 24 OP2 U B2630 46.944 105.077 158.188 1.00 42.03 O
ATOM 25 O5' U B2630 44.943 105.766 156.855 1.00 43.86 O
TER
ATOM 2 P U A2628 48.318 103.215 166.656 1.00 50.48 P
ATOM 3 OP1 U A2628 49.570 104.000 166.806 1.00 50.04 O
ATOM 4 OP2 U A2628 47.108 103.614 167.417 1.00 49.91 O
ATOM 5 O5' U A2628 47.944 103.160 165.110 1.00 49.95 O
ATOM 6 C5' U A2628 48.922 102.762 164.141 1.00 48.83 C
ATOM 7 C4' U A2628 48.310 102.721 162.766 1.00 48.71 C
ATOM 8 O4' U A2628 47.307 101.674 162.699 1.00 48.83 O
ATOM 9 C3' U A2628 47.569 103.971 162.338 1.00 47.23 C
ATOM 10 O3' U A2628 48.478 104.955 161.866 1.00 46.49 O
ATOM 11 C2' U A2628 46.666 103.431 161.238 1.00 48.16 C
ATOM 12 O2' U A2628 47.351 103.215 160.021 1.00 48.59 O
ATOM 13 C1' U A2628 46.274 102.069 161.817 1.00 48.59 C
ATOM 14 N1 U A2628 45.015 102.123 162.572 1.00 51.03 N
ATOM 15 C2 U A2628 43.841 101.847 161.890 1.00 52.15 C
ATOM 16 O2 U A2628 43.814 101.537 160.706 1.00 51.76 O
ATOM 17 N3 U A2628 42.700 101.947 162.648 1.00 52.43 N
ATOM 18 C4 U A2628 42.615 102.281 163.980 1.00 51.43 C
ATOM 19 O4 U A2628 41.512 102.355 164.513 1.00 52.57 O
ATOM 20 C5 U A2628 43.867 102.536 164.612 1.00 51.68 C
ATOM 21 C6 U A2628 44.995 102.450 163.908 1.00 50.97 C
ATOM 22 P C A2629 48.657 106.329 162.674 1.00 47.24 P
ATOM 23 OP1 C A2629 50.100 106.630 162.772 1.00 47.94 O
ATOM 24 OP2 C A2629 47.842 106.222 163.912 1.00 50.53 O
ATOM 25 O5' C A2629 47.999 107.438 161.743 1.00 45.74 O
TER
ATOM 1 O3' U B2628 48.478 104.955 161.866 1.00 46.49 O
ATOM 2 P C B2629 48.657 106.329 162.674 1.00 47.24 P
ATOM 3 OP1 C B2629 50.100 106.630 162.772 1.00 47.94 O
ATOM 4 OP2 C B2629 47.842 106.222 163.912 1.00 50.53 O
ATOM 5 O5' C B2629 47.999 107.438 161.743 1.00 45.74 O
ATOM 6 C5' C B2629 46.611 107.784 161.874 1.00 45.07 C
ATOM 7 C4' C B2629 46.123 108.444 160.611 1.00 46.01 C
ATOM 8 O4' C B2629 46.828 109.692 160.429 1.00 46.39 O
ATOM 9 C3' C B2629 46.367 107.655 159.334 1.00 45.89 C
ATOM 10 O3' C B2629 45.280 106.739 159.136 1.00 44.22 O
ATOM 11 C2' C B2629 46.434 108.753 158.277 1.00 46.19 C
ATOM 12 O2' C B2629 45.165 109.207 157.876 1.00 48.43 O
ATOM 13 C1' C B2629 47.083 109.899 159.056 1.00 46.70 C
ATOM 14 N1 C B2629 48.533 110.113 158.874 1.00 49.40 N
ATOM 15 C2 C B2629 48.998 110.636 157.656 1.00 52.09 C
ATOM 16 O2 C B2629 48.189 110.819 156.723 1.00 53.63 O
ATOM 17 N3 C B2629 50.316 110.930 157.527 1.00 52.76 N
ATOM 18 C4 C B2629 51.154 110.712 158.545 1.00 52.06 C
ATOM 19 N4 C B2629 52.437 111.070 158.391 1.00 51.31 N
ATOM 20 C5 C B2629 50.715 110.133 159.769 1.00 50.96 C
ATOM 21 C6 C B2629 49.413 109.848 159.887 1.00 49.57 C
ATOM 22 P U B2630 45.493 105.379 158.300 1.00 44.44 P
ATOM 23 OP1 U B2630 44.578 104.358 158.881 1.00 42.66 O
ATOM 24 OP2 U B2630 46.944 105.077 158.188 1.00 42.03 O
ATOM 25 O5' U B2630 44.943 105.766 156.855 1.00 43.86 O
TER
Atoms:
C4: (42.615,102.281,163.980)
N3: (42.700,101.947,162.648)
OP1: (49.570,104.000,166.806)
OP2: (47.108,103.614,167.417)
C2: (43.841,101.847,161.890)
C1': (46.274,102.069,161.817)
C3': (47.569,103.971,162.338)
O5': (47.944,103.160,165.110)
O4': (47.307,101.674,162.699)
C5': (48.922,102.762,164.141)
P: (48.318,103.215,166.656)
C4': (48.310,102.721,162.766)
C2': (46.666,103.431,161.238)
O2': (47.351,103.215,160.021)
N1: (45.015,102.123,162.572)
O4: (41.512,102.355,164.513)
O2: (43.814,101.537,160.706)
C6: (44.995,102.450,163.908)
C5: (43.867,102.536,164.612)
O3': (48.478,104.955,161.866)
N3: (42.700,101.947,162.648)
OP1: (49.570,104.000,166.806)
OP2: (47.108,103.614,167.417)
C2: (43.841,101.847,161.890)
C1': (46.274,102.069,161.817)
C3': (47.569,103.971,162.338)
O5': (47.944,103.160,165.110)
O4': (47.307,101.674,162.699)
C5': (48.922,102.762,164.141)
P: (48.318,103.215,166.656)
C4': (48.310,102.721,162.766)
C2': (46.666,103.431,161.238)
O2': (47.351,103.215,160.021)
N1: (45.015,102.123,162.572)
O4: (41.512,102.355,164.513)
O2: (43.814,101.537,160.706)
C6: (44.995,102.450,163.908)
C5: (43.867,102.536,164.612)
O3': (48.478,104.955,161.866)
C2: (48.998,110.636,157.656)
OP1: (50.100,106.630,162.772)
OP2: (47.842,106.222,163.912)
C4: (51.154,110.712,158.545)
O5': (47.999,107.438,161.743)
C3': (46.367,107.655,159.334)
C1': (47.083,109.899,159.056)
O4': (46.828,109.692,160.429)
C5': (46.611,107.784,161.874)
P: (48.657,106.329,162.674)
O2: (48.189,110.819,156.723)
C4': (46.123,108.444,160.611)
C2': (46.434,108.753,158.277)
O2': (45.165,109.207,157.876)
N1: (48.533,110.113,158.874)
N3: (50.316,110.930,157.527)
N4: (52.437,111.070,158.391)
C6: (49.413,109.848,159.887)
C5: (50.715,110.133,159.769)
O3': (45.280,106.739,159.136)
OP1: (50.100,106.630,162.772)
OP2: (47.842,106.222,163.912)
C4: (51.154,110.712,158.545)
O5': (47.999,107.438,161.743)
C3': (46.367,107.655,159.334)
C1': (47.083,109.899,159.056)
O4': (46.828,109.692,160.429)
C5': (46.611,107.784,161.874)
P: (48.657,106.329,162.674)
O2: (48.189,110.819,156.723)
C4': (46.123,108.444,160.611)
C2': (46.434,108.753,158.277)
O2': (45.165,109.207,157.876)
N1: (48.533,110.113,158.874)
N3: (50.316,110.930,157.527)
N4: (52.437,111.070,158.391)
C6: (49.413,109.848,159.887)
C5: (50.715,110.133,159.769)
O3': (45.280,106.739,159.136)
Image (generated by PyMOL):