Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02628:02629
Extra
PDB:
ATOM 1 O3' A A2627 48.722 101.882 167.553 1.00 56.93 O
ATOM 2 P U A2628 48.363 103.408 167.254 1.00 58.04 P
ATOM 3 OP1 U A2628 49.532 104.285 167.522 1.00 54.91 O
ATOM 4 OP2 U A2628 47.084 103.642 167.977 1.00 58.26 O
ATOM 5 O5' U A2628 48.045 103.413 165.691 1.00 56.48 O
ATOM 6 C5' U A2628 49.043 103.010 164.736 1.00 56.09 C
ATOM 7 C4' U A2628 48.471 103.012 163.334 1.00 56.22 C
ATOM 8 O4' U A2628 47.475 101.964 163.187 1.00 54.91 O
ATOM 9 C3' U A2628 47.758 104.284 162.907 1.00 53.98 C
ATOM 10 O3' U A2628 48.694 105.244 162.444 1.00 54.00 O
ATOM 11 C2' U A2628 46.865 103.786 161.779 1.00 53.34 C
ATOM 12 O2' U A2628 47.570 103.655 160.564 1.00 52.46 O
ATOM 13 C1' U A2628 46.466 102.399 162.296 1.00 53.71 C
ATOM 14 N1 U A2628 45.196 102.421 163.029 1.00 56.40 N
ATOM 15 C2 U A2628 44.045 102.098 162.334 1.00 57.67 C
ATOM 16 O2 U A2628 44.045 101.771 161.154 1.00 57.00 O
ATOM 17 N3 U A2628 42.889 102.172 163.074 1.00 58.29 N
ATOM 18 C4 U A2628 42.772 102.520 164.405 1.00 56.71 C
ATOM 19 O4 U A2628 41.657 102.564 164.919 1.00 57.10 O
ATOM 20 C5 U A2628 44.006 102.824 165.055 1.00 56.94 C
ATOM 21 C6 U A2628 45.147 102.765 164.368 1.00 56.73 C
ATOM 22 P C A2629 48.870 106.631 163.226 1.00 54.65 P
ATOM 23 OP1 C A2629 50.301 106.986 163.224 1.00 56.38 O
ATOM 24 OP2 C A2629 48.142 106.519 164.515 1.00 58.24 O
ATOM 25 O5' C A2629 48.124 107.700 162.317 1.00 53.71 O
TER
ATOM 1 O3' U B2628 48.694 105.244 162.444 1.00 54.00 O
ATOM 2 P C B2629 48.870 106.631 163.226 1.00 54.65 P
ATOM 3 OP1 C B2629 50.301 106.986 163.224 1.00 56.38 O
ATOM 4 OP2 C B2629 48.142 106.519 164.515 1.00 58.24 O
ATOM 5 O5' C B2629 48.124 107.700 162.317 1.00 53.71 O
ATOM 6 C5' C B2629 46.701 107.862 162.375 1.00 52.83 C
ATOM 7 C4' C B2629 46.230 108.612 161.160 1.00 52.97 C
ATOM 8 O4' C B2629 46.986 109.844 161.069 1.00 53.55 O
ATOM 9 C3' C B2629 46.476 107.901 159.839 1.00 52.78 C
ATOM 10 O3' C B2629 45.365 107.025 159.584 1.00 52.87 O
ATOM 11 C2' C B2629 46.584 109.069 158.857 1.00 53.32 C
ATOM 12 O2' C B2629 45.342 109.614 158.483 1.00 55.02 O
ATOM 13 C1' C B2629 47.263 110.138 159.715 1.00 53.86 C
ATOM 14 N1 C B2629 48.724 110.330 159.546 1.00 55.33 N
ATOM 15 C2 C B2629 49.214 110.781 158.309 1.00 56.50 C
ATOM 16 O2 C B2629 48.420 110.944 157.363 1.00 58.16 O
ATOM 17 N3 C B2629 50.537 111.031 158.176 1.00 56.09 N
ATOM 18 C4 C B2629 51.360 110.853 159.209 1.00 55.96 C
ATOM 19 N4 C B2629 52.652 111.170 159.044 1.00 53.80 N
ATOM 20 C5 C B2629 50.897 110.358 160.463 1.00 56.21 C
ATOM 21 C6 C B2629 49.587 110.108 160.585 1.00 55.94 C
ATOM 22 P U B2630 45.554 105.672 158.722 1.00 51.63 P
ATOM 23 OP1 U B2630 44.664 104.643 159.319 1.00 51.74 O
ATOM 24 OP2 U B2630 46.991 105.368 158.544 1.00 51.06 O
ATOM 25 O5' U B2630 44.932 106.069 157.311 1.00 51.59 O
TER
ATOM 2 P U A2628 48.363 103.408 167.254 1.00 58.04 P
ATOM 3 OP1 U A2628 49.532 104.285 167.522 1.00 54.91 O
ATOM 4 OP2 U A2628 47.084 103.642 167.977 1.00 58.26 O
ATOM 5 O5' U A2628 48.045 103.413 165.691 1.00 56.48 O
ATOM 6 C5' U A2628 49.043 103.010 164.736 1.00 56.09 C
ATOM 7 C4' U A2628 48.471 103.012 163.334 1.00 56.22 C
ATOM 8 O4' U A2628 47.475 101.964 163.187 1.00 54.91 O
ATOM 9 C3' U A2628 47.758 104.284 162.907 1.00 53.98 C
ATOM 10 O3' U A2628 48.694 105.244 162.444 1.00 54.00 O
ATOM 11 C2' U A2628 46.865 103.786 161.779 1.00 53.34 C
ATOM 12 O2' U A2628 47.570 103.655 160.564 1.00 52.46 O
ATOM 13 C1' U A2628 46.466 102.399 162.296 1.00 53.71 C
ATOM 14 N1 U A2628 45.196 102.421 163.029 1.00 56.40 N
ATOM 15 C2 U A2628 44.045 102.098 162.334 1.00 57.67 C
ATOM 16 O2 U A2628 44.045 101.771 161.154 1.00 57.00 O
ATOM 17 N3 U A2628 42.889 102.172 163.074 1.00 58.29 N
ATOM 18 C4 U A2628 42.772 102.520 164.405 1.00 56.71 C
ATOM 19 O4 U A2628 41.657 102.564 164.919 1.00 57.10 O
ATOM 20 C5 U A2628 44.006 102.824 165.055 1.00 56.94 C
ATOM 21 C6 U A2628 45.147 102.765 164.368 1.00 56.73 C
ATOM 22 P C A2629 48.870 106.631 163.226 1.00 54.65 P
ATOM 23 OP1 C A2629 50.301 106.986 163.224 1.00 56.38 O
ATOM 24 OP2 C A2629 48.142 106.519 164.515 1.00 58.24 O
ATOM 25 O5' C A2629 48.124 107.700 162.317 1.00 53.71 O
TER
ATOM 1 O3' U B2628 48.694 105.244 162.444 1.00 54.00 O
ATOM 2 P C B2629 48.870 106.631 163.226 1.00 54.65 P
ATOM 3 OP1 C B2629 50.301 106.986 163.224 1.00 56.38 O
ATOM 4 OP2 C B2629 48.142 106.519 164.515 1.00 58.24 O
ATOM 5 O5' C B2629 48.124 107.700 162.317 1.00 53.71 O
ATOM 6 C5' C B2629 46.701 107.862 162.375 1.00 52.83 C
ATOM 7 C4' C B2629 46.230 108.612 161.160 1.00 52.97 C
ATOM 8 O4' C B2629 46.986 109.844 161.069 1.00 53.55 O
ATOM 9 C3' C B2629 46.476 107.901 159.839 1.00 52.78 C
ATOM 10 O3' C B2629 45.365 107.025 159.584 1.00 52.87 O
ATOM 11 C2' C B2629 46.584 109.069 158.857 1.00 53.32 C
ATOM 12 O2' C B2629 45.342 109.614 158.483 1.00 55.02 O
ATOM 13 C1' C B2629 47.263 110.138 159.715 1.00 53.86 C
ATOM 14 N1 C B2629 48.724 110.330 159.546 1.00 55.33 N
ATOM 15 C2 C B2629 49.214 110.781 158.309 1.00 56.50 C
ATOM 16 O2 C B2629 48.420 110.944 157.363 1.00 58.16 O
ATOM 17 N3 C B2629 50.537 111.031 158.176 1.00 56.09 N
ATOM 18 C4 C B2629 51.360 110.853 159.209 1.00 55.96 C
ATOM 19 N4 C B2629 52.652 111.170 159.044 1.00 53.80 N
ATOM 20 C5 C B2629 50.897 110.358 160.463 1.00 56.21 C
ATOM 21 C6 C B2629 49.587 110.108 160.585 1.00 55.94 C
ATOM 22 P U B2630 45.554 105.672 158.722 1.00 51.63 P
ATOM 23 OP1 U B2630 44.664 104.643 159.319 1.00 51.74 O
ATOM 24 OP2 U B2630 46.991 105.368 158.544 1.00 51.06 O
ATOM 25 O5' U B2630 44.932 106.069 157.311 1.00 51.59 O
TER
Atoms:
C4: (42.772,102.520,164.405)
N3: (42.889,102.172,163.074)
OP1: (49.532,104.285,167.522)
OP2: (47.084,103.642,167.977)
C2: (44.045,102.098,162.334)
C1': (46.466,102.399,162.296)
C3': (47.758,104.284,162.907)
O5': (48.045,103.413,165.691)
O4': (47.475,101.964,163.187)
C5': (49.043,103.010,164.736)
P: (48.363,103.408,167.254)
C4': (48.471,103.012,163.334)
C2': (46.865,103.786,161.779)
O2': (47.570,103.655,160.564)
N1: (45.196,102.421,163.029)
O4: (41.657,102.564,164.919)
O2: (44.045,101.771,161.154)
C6: (45.147,102.765,164.368)
C5: (44.006,102.824,165.055)
O3': (48.694,105.244,162.444)
N3: (42.889,102.172,163.074)
OP1: (49.532,104.285,167.522)
OP2: (47.084,103.642,167.977)
C2: (44.045,102.098,162.334)
C1': (46.466,102.399,162.296)
C3': (47.758,104.284,162.907)
O5': (48.045,103.413,165.691)
O4': (47.475,101.964,163.187)
C5': (49.043,103.010,164.736)
P: (48.363,103.408,167.254)
C4': (48.471,103.012,163.334)
C2': (46.865,103.786,161.779)
O2': (47.570,103.655,160.564)
N1: (45.196,102.421,163.029)
O4: (41.657,102.564,164.919)
O2: (44.045,101.771,161.154)
C6: (45.147,102.765,164.368)
C5: (44.006,102.824,165.055)
O3': (48.694,105.244,162.444)
C2: (49.214,110.781,158.309)
OP1: (50.301,106.986,163.224)
OP2: (48.142,106.519,164.515)
C4: (51.360,110.853,159.209)
O5': (48.124,107.700,162.317)
C3': (46.476,107.901,159.839)
C1': (47.263,110.138,159.715)
O4': (46.986,109.844,161.069)
C5': (46.701,107.862,162.375)
P: (48.870,106.631,163.226)
O2: (48.420,110.944,157.363)
C4': (46.230,108.612,161.160)
C2': (46.584,109.069,158.857)
O2': (45.342,109.614,158.483)
N1: (48.724,110.330,159.546)
N3: (50.537,111.031,158.176)
N4: (52.652,111.170,159.044)
C6: (49.587,110.108,160.585)
C5: (50.897,110.358,160.463)
O3': (45.365,107.025,159.584)
OP1: (50.301,106.986,163.224)
OP2: (48.142,106.519,164.515)
C4: (51.360,110.853,159.209)
O5': (48.124,107.700,162.317)
C3': (46.476,107.901,159.839)
C1': (47.263,110.138,159.715)
O4': (46.986,109.844,161.069)
C5': (46.701,107.862,162.375)
P: (48.870,106.631,163.226)
O2: (48.420,110.944,157.363)
C4': (46.230,108.612,161.160)
C2': (46.584,109.069,158.857)
O2': (45.342,109.614,158.483)
N1: (48.724,110.330,159.546)
N3: (50.537,111.031,158.176)
N4: (52.652,111.170,159.044)
C6: (49.587,110.108,160.585)
C5: (50.897,110.358,160.463)
O3': (45.365,107.025,159.584)
Image (generated by PyMOL):