Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02628:02629
Extra
PDB:
ATOM 1 O3' A A2627 48.561 101.750 167.036 1.00 54.89 O
ATOM 2 P U A2628 48.206 103.277 166.725 1.00 54.40 P
ATOM 3 OP1 U A2628 49.418 104.109 166.925 1.00 53.07 O
ATOM 4 OP2 U A2628 46.968 103.594 167.479 1.00 53.91 O
ATOM 5 O5' U A2628 47.856 103.255 165.174 1.00 53.21 O
ATOM 6 C5' U A2628 48.872 102.971 164.204 1.00 51.90 C
ATOM 7 C4' U A2628 48.274 102.921 162.821 1.00 51.78 C
ATOM 8 O4' U A2628 47.323 101.831 162.745 1.00 51.21 O
ATOM 9 C3' U A2628 47.483 104.140 162.383 1.00 49.49 C
ATOM 10 O3' U A2628 48.351 105.138 161.870 1.00 49.32 O
ATOM 11 C2' U A2628 46.601 103.562 161.287 1.00 49.91 C
ATOM 12 O2' U A2628 47.293 103.390 160.072 1.00 50.24 O
ATOM 13 C1' U A2628 46.280 102.179 161.857 1.00 50.54 C
ATOM 14 N1 U A2628 45.012 102.153 162.597 1.00 52.78 N
ATOM 15 C2 U A2628 43.864 101.853 161.888 1.00 54.12 C
ATOM 16 O2 U A2628 43.869 101.580 160.691 1.00 54.04 O
ATOM 17 N3 U A2628 42.708 101.882 162.628 1.00 54.12 N
ATOM 18 C4 U A2628 42.588 102.166 163.967 1.00 53.36 C
ATOM 19 O4 U A2628 41.474 102.184 164.478 1.00 55.46 O
ATOM 20 C5 U A2628 43.818 102.447 164.632 1.00 53.18 C
ATOM 21 C6 U A2628 44.959 102.431 163.946 1.00 52.53 C
ATOM 22 P C A2629 48.650 106.454 162.732 1.00 50.42 P
ATOM 23 OP1 C A2629 50.109 106.681 162.763 1.00 50.53 O
ATOM 24 OP2 C A2629 47.901 106.312 164.003 1.00 51.82 O
ATOM 25 O5' C A2629 47.995 107.640 161.899 1.00 49.69 O
TER
ATOM 1 O3' U B2628 48.351 105.138 161.870 1.00 49.32 O
ATOM 2 P C B2629 48.650 106.454 162.732 1.00 50.42 P
ATOM 3 OP1 C B2629 50.109 106.681 162.763 1.00 50.53 O
ATOM 4 OP2 C B2629 47.901 106.312 164.003 1.00 51.82 O
ATOM 5 O5' C B2629 47.995 107.640 161.899 1.00 49.69 O
ATOM 6 C5' C B2629 46.587 107.917 162.005 1.00 50.60 C
ATOM 7 C4' C B2629 46.076 108.510 160.718 1.00 50.61 C
ATOM 8 O4' C B2629 46.729 109.780 160.492 1.00 50.30 O
ATOM 9 C3' C B2629 46.346 107.680 159.473 1.00 49.61 C
ATOM 10 O3' C B2629 45.273 106.741 159.313 1.00 48.82 O
ATOM 11 C2' C B2629 46.388 108.741 158.380 1.00 49.96 C
ATOM 12 O2' C B2629 45.098 109.131 157.979 1.00 51.96 O
ATOM 13 C1' C B2629 47.008 109.931 159.118 1.00 51.02 C
ATOM 14 N1 C B2629 48.462 110.144 158.963 1.00 54.65 N
ATOM 15 C2 C B2629 48.939 110.725 157.779 1.00 56.04 C
ATOM 16 O2 C B2629 48.137 110.978 156.867 1.00 57.87 O
ATOM 17 N3 C B2629 50.260 110.997 157.660 1.00 56.74 N
ATOM 18 C4 C B2629 51.095 110.712 158.662 1.00 56.40 C
ATOM 19 N4 C B2629 52.384 111.050 158.518 1.00 56.11 N
ATOM 20 C5 C B2629 50.645 110.082 159.862 1.00 55.93 C
ATOM 21 C6 C B2629 49.335 109.815 159.968 1.00 55.42 C
ATOM 22 P U B2630 45.446 105.447 158.370 1.00 49.67 P
ATOM 23 OP1 U B2630 44.599 104.368 158.944 1.00 47.43 O
ATOM 24 OP2 U B2630 46.885 105.193 158.120 1.00 48.27 O
ATOM 25 O5' U B2630 44.774 105.902 156.999 1.00 50.48 O
TER
ATOM 2 P U A2628 48.206 103.277 166.725 1.00 54.40 P
ATOM 3 OP1 U A2628 49.418 104.109 166.925 1.00 53.07 O
ATOM 4 OP2 U A2628 46.968 103.594 167.479 1.00 53.91 O
ATOM 5 O5' U A2628 47.856 103.255 165.174 1.00 53.21 O
ATOM 6 C5' U A2628 48.872 102.971 164.204 1.00 51.90 C
ATOM 7 C4' U A2628 48.274 102.921 162.821 1.00 51.78 C
ATOM 8 O4' U A2628 47.323 101.831 162.745 1.00 51.21 O
ATOM 9 C3' U A2628 47.483 104.140 162.383 1.00 49.49 C
ATOM 10 O3' U A2628 48.351 105.138 161.870 1.00 49.32 O
ATOM 11 C2' U A2628 46.601 103.562 161.287 1.00 49.91 C
ATOM 12 O2' U A2628 47.293 103.390 160.072 1.00 50.24 O
ATOM 13 C1' U A2628 46.280 102.179 161.857 1.00 50.54 C
ATOM 14 N1 U A2628 45.012 102.153 162.597 1.00 52.78 N
ATOM 15 C2 U A2628 43.864 101.853 161.888 1.00 54.12 C
ATOM 16 O2 U A2628 43.869 101.580 160.691 1.00 54.04 O
ATOM 17 N3 U A2628 42.708 101.882 162.628 1.00 54.12 N
ATOM 18 C4 U A2628 42.588 102.166 163.967 1.00 53.36 C
ATOM 19 O4 U A2628 41.474 102.184 164.478 1.00 55.46 O
ATOM 20 C5 U A2628 43.818 102.447 164.632 1.00 53.18 C
ATOM 21 C6 U A2628 44.959 102.431 163.946 1.00 52.53 C
ATOM 22 P C A2629 48.650 106.454 162.732 1.00 50.42 P
ATOM 23 OP1 C A2629 50.109 106.681 162.763 1.00 50.53 O
ATOM 24 OP2 C A2629 47.901 106.312 164.003 1.00 51.82 O
ATOM 25 O5' C A2629 47.995 107.640 161.899 1.00 49.69 O
TER
ATOM 1 O3' U B2628 48.351 105.138 161.870 1.00 49.32 O
ATOM 2 P C B2629 48.650 106.454 162.732 1.00 50.42 P
ATOM 3 OP1 C B2629 50.109 106.681 162.763 1.00 50.53 O
ATOM 4 OP2 C B2629 47.901 106.312 164.003 1.00 51.82 O
ATOM 5 O5' C B2629 47.995 107.640 161.899 1.00 49.69 O
ATOM 6 C5' C B2629 46.587 107.917 162.005 1.00 50.60 C
ATOM 7 C4' C B2629 46.076 108.510 160.718 1.00 50.61 C
ATOM 8 O4' C B2629 46.729 109.780 160.492 1.00 50.30 O
ATOM 9 C3' C B2629 46.346 107.680 159.473 1.00 49.61 C
ATOM 10 O3' C B2629 45.273 106.741 159.313 1.00 48.82 O
ATOM 11 C2' C B2629 46.388 108.741 158.380 1.00 49.96 C
ATOM 12 O2' C B2629 45.098 109.131 157.979 1.00 51.96 O
ATOM 13 C1' C B2629 47.008 109.931 159.118 1.00 51.02 C
ATOM 14 N1 C B2629 48.462 110.144 158.963 1.00 54.65 N
ATOM 15 C2 C B2629 48.939 110.725 157.779 1.00 56.04 C
ATOM 16 O2 C B2629 48.137 110.978 156.867 1.00 57.87 O
ATOM 17 N3 C B2629 50.260 110.997 157.660 1.00 56.74 N
ATOM 18 C4 C B2629 51.095 110.712 158.662 1.00 56.40 C
ATOM 19 N4 C B2629 52.384 111.050 158.518 1.00 56.11 N
ATOM 20 C5 C B2629 50.645 110.082 159.862 1.00 55.93 C
ATOM 21 C6 C B2629 49.335 109.815 159.968 1.00 55.42 C
ATOM 22 P U B2630 45.446 105.447 158.370 1.00 49.67 P
ATOM 23 OP1 U B2630 44.599 104.368 158.944 1.00 47.43 O
ATOM 24 OP2 U B2630 46.885 105.193 158.120 1.00 48.27 O
ATOM 25 O5' U B2630 44.774 105.902 156.999 1.00 50.48 O
TER
Atoms:
C4: (42.588,102.166,163.967)
N3: (42.708,101.882,162.628)
OP1: (49.418,104.109,166.925)
OP2: (46.968,103.594,167.479)
C2: (43.864,101.853,161.888)
C1': (46.280,102.179,161.857)
C3': (47.483,104.140,162.383)
O5': (47.856,103.255,165.174)
O4': (47.323,101.831,162.745)
C5': (48.872,102.971,164.204)
P: (48.206,103.277,166.725)
C4': (48.274,102.921,162.821)
C2': (46.601,103.562,161.287)
O2': (47.293,103.390,160.072)
N1: (45.012,102.153,162.597)
O4: (41.474,102.184,164.478)
O2: (43.869,101.580,160.691)
C6: (44.959,102.431,163.946)
C5: (43.818,102.447,164.632)
O3': (48.351,105.138,161.870)
N3: (42.708,101.882,162.628)
OP1: (49.418,104.109,166.925)
OP2: (46.968,103.594,167.479)
C2: (43.864,101.853,161.888)
C1': (46.280,102.179,161.857)
C3': (47.483,104.140,162.383)
O5': (47.856,103.255,165.174)
O4': (47.323,101.831,162.745)
C5': (48.872,102.971,164.204)
P: (48.206,103.277,166.725)
C4': (48.274,102.921,162.821)
C2': (46.601,103.562,161.287)
O2': (47.293,103.390,160.072)
N1: (45.012,102.153,162.597)
O4: (41.474,102.184,164.478)
O2: (43.869,101.580,160.691)
C6: (44.959,102.431,163.946)
C5: (43.818,102.447,164.632)
O3': (48.351,105.138,161.870)
C2: (48.939,110.725,157.779)
OP1: (50.109,106.681,162.763)
OP2: (47.901,106.312,164.003)
C4: (51.095,110.712,158.662)
O5': (47.995,107.640,161.899)
C3': (46.346,107.680,159.473)
C1': (47.008,109.931,159.118)
O4': (46.729,109.780,160.492)
C5': (46.587,107.917,162.005)
P: (48.650,106.454,162.732)
O2: (48.137,110.978,156.867)
C4': (46.076,108.510,160.718)
C2': (46.388,108.741,158.380)
O2': (45.098,109.131,157.979)
N1: (48.462,110.144,158.963)
N3: (50.260,110.997,157.660)
N4: (52.384,111.050,158.518)
C6: (49.335,109.815,159.968)
C5: (50.645,110.082,159.862)
O3': (45.273,106.741,159.313)
OP1: (50.109,106.681,162.763)
OP2: (47.901,106.312,164.003)
C4: (51.095,110.712,158.662)
O5': (47.995,107.640,161.899)
C3': (46.346,107.680,159.473)
C1': (47.008,109.931,159.118)
O4': (46.729,109.780,160.492)
C5': (46.587,107.917,162.005)
P: (48.650,106.454,162.732)
O2: (48.137,110.978,156.867)
C4': (46.076,108.510,160.718)
C2': (46.388,108.741,158.380)
O2': (45.098,109.131,157.979)
N1: (48.462,110.144,158.963)
N3: (50.260,110.997,157.660)
N4: (52.384,111.050,158.518)
C6: (49.335,109.815,159.968)
C5: (50.645,110.082,159.862)
O3': (45.273,106.741,159.313)
Image (generated by PyMOL):