Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A480:A477
Extra
PDB:
ATOM 1 O3' G A 479 48.418 -54.189 -37.837 1.00 24.04 O
ATOM 2 P A A 480 49.001 -55.375 -38.745 1.00 27.90 P
ATOM 3 OP1 A A 480 48.103 -55.515 -39.933 1.00 26.73 O
ATOM 4 OP2 A A 480 49.195 -56.552 -37.862 1.00 30.08 O
ATOM 5 O5' A A 480 50.411 -54.786 -39.208 1.00 33.38 O
ATOM 6 C5' A A 480 50.612 -54.368 -40.550 1.00 28.73 C
ATOM 7 C4' A A 480 51.942 -53.693 -40.738 1.00 31.00 C
ATOM 8 O4' A A 480 52.272 -52.886 -39.572 1.00 27.13 O
ATOM 9 C3' A A 480 53.140 -54.607 -40.907 1.00 23.98 C
ATOM 10 O3' A A 480 53.252 -55.121 -42.214 1.00 18.19 O
ATOM 11 C2' A A 480 54.278 -53.687 -40.532 1.00 29.12 C
ATOM 12 O2' A A 480 54.513 -52.767 -41.583 1.00 29.04 O
ATOM 13 C1' A A 480 53.663 -52.920 -39.362 1.00 27.38 C
ATOM 14 N9 A A 480 53.919 -53.579 -38.066 1.00 33.81 N
ATOM 15 C8 A A 480 53.257 -54.653 -37.520 1.00 31.91 C
ATOM 16 N7 A A 480 53.686 -55.012 -36.334 1.00 32.33 N
ATOM 17 C5 A A 480 54.697 -54.111 -36.085 1.00 34.50 C
ATOM 18 C6 A A 480 55.548 -53.961 -34.999 1.00 32.48 C
ATOM 19 N6 A A 480 55.493 -54.752 -33.942 1.00 32.87 N
ATOM 20 N1 A A 480 56.463 -52.977 -35.048 1.00 33.69 N
ATOM 21 C2 A A 480 56.511 -52.183 -36.123 1.00 32.40 C
ATOM 22 N3 A A 480 55.760 -52.216 -37.211 1.00 33.26 N
ATOM 23 C4 A A 480 54.865 -53.221 -37.132 1.00 37.56 C
ATOM 24 P G A 481 52.746 -56.602 -42.534 1.00 28.19 P
ATOM 25 OP1 G A 481 52.849 -56.811 -43.999 1.00 22.59 O
ATOM 26 OP2 G A 481 51.426 -56.773 -41.852 1.00 26.78 O
ATOM 27 O5' G A 481 53.822 -57.485 -41.823 1.00 32.46 O
TER
ATOM 1 O3' C B 476 51.040 -61.831 -26.623 1.00 25.20 O
ATOM 2 P G B 477 50.240 -60.477 -26.326 1.00 34.06 P
ATOM 3 OP1 G B 477 50.766 -59.929 -25.040 1.00 27.52 O
ATOM 4 OP2 G B 477 48.780 -60.787 -26.439 1.00 42.26 O
ATOM 5 O5' G B 477 50.679 -59.553 -27.514 1.00 24.30 O
ATOM 6 C5' G B 477 51.568 -58.501 -27.286 1.00 25.52 C
ATOM 7 C4' G B 477 51.909 -57.782 -28.556 1.00 27.28 C
ATOM 8 O4' G B 477 51.969 -58.701 -29.672 1.00 29.70 O
ATOM 9 C3' G B 477 50.935 -56.737 -29.032 1.00 19.99 C
ATOM 10 O3' G B 477 50.965 -55.568 -28.250 1.00 25.85 O
ATOM 11 C2' G B 477 51.423 -56.522 -30.451 1.00 26.08 C
ATOM 12 O2' G B 477 52.606 -55.736 -30.447 1.00 28.93 O
ATOM 13 C1' G B 477 51.796 -57.956 -30.867 1.00 26.32 C
ATOM 14 N9 G B 477 50.745 -58.578 -31.704 1.00 27.81 N
ATOM 15 C8 G B 477 49.755 -59.460 -31.369 1.00 35.73 C
ATOM 16 N7 G B 477 48.956 -59.757 -32.360 1.00 39.51 N
ATOM 17 C5 G B 477 49.439 -59.019 -33.429 1.00 30.69 C
ATOM 18 C6 G B 477 48.994 -58.913 -34.781 1.00 32.66 C
ATOM 19 O6 G B 477 48.050 -59.443 -35.395 1.00 43.02 O
ATOM 20 N1 G B 477 49.782 -58.059 -35.506 1.00 29.58 N
ATOM 21 C2 G B 477 50.849 -57.386 -35.017 1.00 35.16 C
ATOM 22 N2 G B 477 51.465 -56.623 -35.926 1.00 36.86 N
ATOM 23 N3 G B 477 51.273 -57.452 -33.765 1.00 38.91 N
ATOM 24 C4 G B 477 50.529 -58.292 -33.030 1.00 31.40 C
ATOM 25 P U B 478 49.604 -54.984 -27.631 1.00 28.09 P
ATOM 26 OP1 U B 478 49.919 -53.679 -26.973 1.00 25.14 O
ATOM 27 OP2 U B 478 49.011 -56.069 -26.807 1.00 22.78 O
ATOM 28 O5' U B 478 48.732 -54.729 -28.952 1.00 28.31 O
TER
ATOM 2 P A A 480 49.001 -55.375 -38.745 1.00 27.90 P
ATOM 3 OP1 A A 480 48.103 -55.515 -39.933 1.00 26.73 O
ATOM 4 OP2 A A 480 49.195 -56.552 -37.862 1.00 30.08 O
ATOM 5 O5' A A 480 50.411 -54.786 -39.208 1.00 33.38 O
ATOM 6 C5' A A 480 50.612 -54.368 -40.550 1.00 28.73 C
ATOM 7 C4' A A 480 51.942 -53.693 -40.738 1.00 31.00 C
ATOM 8 O4' A A 480 52.272 -52.886 -39.572 1.00 27.13 O
ATOM 9 C3' A A 480 53.140 -54.607 -40.907 1.00 23.98 C
ATOM 10 O3' A A 480 53.252 -55.121 -42.214 1.00 18.19 O
ATOM 11 C2' A A 480 54.278 -53.687 -40.532 1.00 29.12 C
ATOM 12 O2' A A 480 54.513 -52.767 -41.583 1.00 29.04 O
ATOM 13 C1' A A 480 53.663 -52.920 -39.362 1.00 27.38 C
ATOM 14 N9 A A 480 53.919 -53.579 -38.066 1.00 33.81 N
ATOM 15 C8 A A 480 53.257 -54.653 -37.520 1.00 31.91 C
ATOM 16 N7 A A 480 53.686 -55.012 -36.334 1.00 32.33 N
ATOM 17 C5 A A 480 54.697 -54.111 -36.085 1.00 34.50 C
ATOM 18 C6 A A 480 55.548 -53.961 -34.999 1.00 32.48 C
ATOM 19 N6 A A 480 55.493 -54.752 -33.942 1.00 32.87 N
ATOM 20 N1 A A 480 56.463 -52.977 -35.048 1.00 33.69 N
ATOM 21 C2 A A 480 56.511 -52.183 -36.123 1.00 32.40 C
ATOM 22 N3 A A 480 55.760 -52.216 -37.211 1.00 33.26 N
ATOM 23 C4 A A 480 54.865 -53.221 -37.132 1.00 37.56 C
ATOM 24 P G A 481 52.746 -56.602 -42.534 1.00 28.19 P
ATOM 25 OP1 G A 481 52.849 -56.811 -43.999 1.00 22.59 O
ATOM 26 OP2 G A 481 51.426 -56.773 -41.852 1.00 26.78 O
ATOM 27 O5' G A 481 53.822 -57.485 -41.823 1.00 32.46 O
TER
ATOM 1 O3' C B 476 51.040 -61.831 -26.623 1.00 25.20 O
ATOM 2 P G B 477 50.240 -60.477 -26.326 1.00 34.06 P
ATOM 3 OP1 G B 477 50.766 -59.929 -25.040 1.00 27.52 O
ATOM 4 OP2 G B 477 48.780 -60.787 -26.439 1.00 42.26 O
ATOM 5 O5' G B 477 50.679 -59.553 -27.514 1.00 24.30 O
ATOM 6 C5' G B 477 51.568 -58.501 -27.286 1.00 25.52 C
ATOM 7 C4' G B 477 51.909 -57.782 -28.556 1.00 27.28 C
ATOM 8 O4' G B 477 51.969 -58.701 -29.672 1.00 29.70 O
ATOM 9 C3' G B 477 50.935 -56.737 -29.032 1.00 19.99 C
ATOM 10 O3' G B 477 50.965 -55.568 -28.250 1.00 25.85 O
ATOM 11 C2' G B 477 51.423 -56.522 -30.451 1.00 26.08 C
ATOM 12 O2' G B 477 52.606 -55.736 -30.447 1.00 28.93 O
ATOM 13 C1' G B 477 51.796 -57.956 -30.867 1.00 26.32 C
ATOM 14 N9 G B 477 50.745 -58.578 -31.704 1.00 27.81 N
ATOM 15 C8 G B 477 49.755 -59.460 -31.369 1.00 35.73 C
ATOM 16 N7 G B 477 48.956 -59.757 -32.360 1.00 39.51 N
ATOM 17 C5 G B 477 49.439 -59.019 -33.429 1.00 30.69 C
ATOM 18 C6 G B 477 48.994 -58.913 -34.781 1.00 32.66 C
ATOM 19 O6 G B 477 48.050 -59.443 -35.395 1.00 43.02 O
ATOM 20 N1 G B 477 49.782 -58.059 -35.506 1.00 29.58 N
ATOM 21 C2 G B 477 50.849 -57.386 -35.017 1.00 35.16 C
ATOM 22 N2 G B 477 51.465 -56.623 -35.926 1.00 36.86 N
ATOM 23 N3 G B 477 51.273 -57.452 -33.765 1.00 38.91 N
ATOM 24 C4 G B 477 50.529 -58.292 -33.030 1.00 31.40 C
ATOM 25 P U B 478 49.604 -54.984 -27.631 1.00 28.09 P
ATOM 26 OP1 U B 478 49.919 -53.679 -26.973 1.00 25.14 O
ATOM 27 OP2 U B 478 49.011 -56.069 -26.807 1.00 22.78 O
ATOM 28 O5' U B 478 48.732 -54.729 -28.952 1.00 28.31 O
TER
Atoms:
OP1: (48.103,-55.515,-39.933)
OP2: (49.195,-56.552,-37.862)
C3': (53.140,-54.607,-40.907)
C1': (53.663,-52.920,-39.362)
C5': (50.612,-54.368,-40.550)
O4': (52.272,-52.886,-39.572)
C8: (53.257,-54.653,-37.520)
O2': (54.513,-52.767,-41.583)
C6: (55.548,-53.961,-34.999)
C5: (54.697,-54.111,-36.085)
C4: (54.865,-53.221,-37.132)
P: (49.001,-55.375,-38.745)
C4': (51.942,-53.693,-40.738)
C2': (54.278,-53.687,-40.532)
C2: (56.511,-52.183,-36.123)
N1: (56.463,-52.977,-35.048)
N3: (55.760,-52.216,-37.211)
N6: (55.493,-54.752,-33.942)
N7: (53.686,-55.012,-36.334)
N9: (53.919,-53.579,-38.066)
O5': (50.411,-54.786,-39.208)
O3': (53.252,-55.121,-42.214)
OP2: (49.195,-56.552,-37.862)
C3': (53.140,-54.607,-40.907)
C1': (53.663,-52.920,-39.362)
C5': (50.612,-54.368,-40.550)
O4': (52.272,-52.886,-39.572)
C8: (53.257,-54.653,-37.520)
O2': (54.513,-52.767,-41.583)
C6: (55.548,-53.961,-34.999)
C5: (54.697,-54.111,-36.085)
C4: (54.865,-53.221,-37.132)
P: (49.001,-55.375,-38.745)
C4': (51.942,-53.693,-40.738)
C2': (54.278,-53.687,-40.532)
C2: (56.511,-52.183,-36.123)
N1: (56.463,-52.977,-35.048)
N3: (55.760,-52.216,-37.211)
N6: (55.493,-54.752,-33.942)
N7: (53.686,-55.012,-36.334)
N9: (53.919,-53.579,-38.066)
O5': (50.411,-54.786,-39.208)
O3': (53.252,-55.121,-42.214)
OP1: (50.766,-59.929,-25.040)
OP2: (48.780,-60.787,-26.439)
C3': (50.935,-56.737,-29.032)
C1': (51.796,-57.956,-30.867)
C5': (51.568,-58.501,-27.286)
O6: (48.050,-59.443,-35.395)
O4': (51.969,-58.701,-29.672)
C8: (49.755,-59.460,-31.369)
C2: (50.849,-57.386,-35.017)
C6: (48.994,-58.913,-34.781)
C5: (49.439,-59.019,-33.429)
C4: (50.529,-58.292,-33.030)
P: (50.240,-60.477,-26.326)
C4': (51.909,-57.782,-28.556)
C2': (51.423,-56.522,-30.451)
O2': (52.606,-55.736,-30.447)
N1: (49.782,-58.059,-35.506)
N2: (51.465,-56.623,-35.926)
N3: (51.273,-57.452,-33.765)
N7: (48.956,-59.757,-32.360)
N9: (50.745,-58.578,-31.704)
O5': (50.679,-59.553,-27.514)
O3': (50.965,-55.568,-28.250)
OP2: (48.780,-60.787,-26.439)
C3': (50.935,-56.737,-29.032)
C1': (51.796,-57.956,-30.867)
C5': (51.568,-58.501,-27.286)
O6: (48.050,-59.443,-35.395)
O4': (51.969,-58.701,-29.672)
C8: (49.755,-59.460,-31.369)
C2: (50.849,-57.386,-35.017)
C6: (48.994,-58.913,-34.781)
C5: (49.439,-59.019,-33.429)
C4: (50.529,-58.292,-33.030)
P: (50.240,-60.477,-26.326)
C4': (51.909,-57.782,-28.556)
C2': (51.423,-56.522,-30.451)
O2': (52.606,-55.736,-30.447)
N1: (49.782,-58.059,-35.506)
N2: (51.465,-56.623,-35.926)
N3: (51.273,-57.452,-33.765)
N7: (48.956,-59.757,-32.360)
N9: (50.745,-58.578,-31.704)
O5': (50.679,-59.553,-27.514)
O3': (50.965,-55.568,-28.250)
Image (generated by PyMOL):