ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A2064:A2117

Extra

PDB:
ATOM 1 O3' U A2063 94.622 102.135 75.056 1.00 43.46 O
ATOM 2 P A A2064 93.401 103.117 75.386 1.00 41.42 P
ATOM 3 OP1 A A2064 93.342 104.193 74.356 1.00 41.95 O
ATOM 4 OP2 A A2064 93.531 103.482 76.817 1.00 40.10 O
ATOM 5 O5' A A2064 92.135 102.179 75.218 1.00 41.23 O
ATOM 6 C5' A A2064 91.907 101.049 76.086 1.00 40.31 C
ATOM 7 C4' A A2064 90.553 100.446 75.768 1.00 40.71 C
ATOM 8 O4' A A2064 89.488 101.331 76.217 1.00 41.72 O
ATOM 9 C3' A A2064 90.344 100.305 74.273 1.00 40.62 C
ATOM 10 O3' A A2064 90.891 99.087 73.801 1.00 38.80 O
ATOM 11 C2' A A2064 88.837 100.434 74.103 1.00 41.24 C
ATOM 12 O2' A A2064 88.166 99.209 74.306 1.00 43.41 O
ATOM 13 C1' A A2064 88.475 101.418 75.225 1.00 42.05 C
ATOM 14 N9 A A2064 88.362 102.824 74.799 1.00 41.17 N
ATOM 15 C8 A A2064 89.215 103.846 75.103 1.00 40.66 C
ATOM 16 N7 A A2064 88.888 104.989 74.557 1.00 40.27 N
ATOM 17 C5 A A2064 87.741 104.705 73.841 1.00 40.72 C
ATOM 18 C6 A A2064 86.922 105.499 73.009 1.00 40.76 C
ATOM 19 N6 A A2064 87.173 106.772 72.712 1.00 39.10 N
ATOM 20 N1 A A2064 85.837 104.921 72.467 1.00 41.28 N
ATOM 21 C2 A A2064 85.617 103.627 72.724 1.00 42.18 C
ATOM 22 N3 A A2064 86.329 102.772 73.464 1.00 42.59 N
ATOM 23 C4 A A2064 87.391 103.381 73.999 1.00 41.45 C
ATOM 24 P C A2065 91.290 98.952 72.255 1.00 39.94 P
ATOM 25 OP1 C A2065 91.835 97.604 71.970 1.00 40.83 O
ATOM 26 OP2 C A2065 92.055 100.135 71.853 1.00 41.34 O
ATOM 27 O5' C A2065 89.890 99.060 71.531 1.00 40.37 O
TER

ATOM 1 O3' G B2116 98.626 108.604 67.947 1.00 61.33 O
ATOM 2 P G B2117 97.852 107.892 69.154 1.00 63.83 P
ATOM 3 OP1 G B2117 98.807 108.004 70.317 1.00 62.93 O
ATOM 4 OP2 G B2117 97.426 106.542 68.676 1.00 63.20 O
ATOM 5 O5' G B2117 96.558 108.807 69.375 1.00 59.02 O
ATOM 6 C5' G B2117 96.461 109.644 70.540 1.00 52.59 C
ATOM 7 C4' G B2117 95.767 110.950 70.218 1.00 46.31 C
ATOM 8 O4' G B2117 94.450 110.643 69.708 1.00 44.48 O
ATOM 9 C3' G B2117 95.550 111.841 71.443 1.00 44.03 C
ATOM 10 O3' G B2117 95.463 113.220 71.092 1.00 41.00 O
ATOM 11 C2' G B2117 94.213 111.326 71.956 1.00 42.52 C
ATOM 12 O2' G B2117 93.472 112.233 72.715 1.00 42.15 O
ATOM 13 C1' G B2117 93.480 111.026 70.658 1.00 42.90 C
ATOM 14 N9 G B2117 92.536 109.928 70.809 1.00 43.18 N
ATOM 15 C8 G B2117 91.287 109.858 70.252 1.00 44.32 C
ATOM 16 N7 G B2117 90.642 108.774 70.572 1.00 43.93 N
ATOM 17 C5 G B2117 91.514 108.085 71.393 1.00 43.15 C
ATOM 18 C6 G B2117 91.348 106.862 72.049 1.00 43.49 C
ATOM 19 O6 G B2117 90.354 106.138 72.064 1.00 44.63 O
ATOM 20 N1 G B2117 92.489 106.495 72.756 1.00 43.71 N
ATOM 21 C2 G B2117 93.643 107.224 72.825 1.00 42.95 C
ATOM 22 N2 G B2117 94.646 106.660 73.538 1.00 41.41 N
ATOM 23 N3 G B2117 93.802 108.406 72.232 1.00 43.28 N
ATOM 24 C4 G B2117 92.700 108.770 71.536 1.00 42.68 C
ATOM 25 P G B2118 96.785 114.133 71.009 1.00 36.60 P
ATOM 26 OP1 G B2118 97.886 113.233 70.669 1.00 37.20 O
ATOM 27 OP2 G B2118 96.879 114.996 72.211 1.00 35.49 O
ATOM 28 O5' G B2118 96.481 115.021 69.726 1.00 35.88 O
TER

Atoms:
OP1: (93.342,104.193,74.356)
OP2: (93.531,103.482,76.817)
C3': (90.344,100.305,74.273)
C1': (88.475,101.418,75.225)
C5': (91.907,101.049,76.086)
O4': (89.488,101.331,76.217)
C8: (89.215,103.846,75.103)
O2': (88.166,99.209,74.306)
C6: (86.922,105.499,73.009)
C5: (87.741,104.705,73.841)
C4: (87.391,103.381,73.999)
P: (93.401,103.117,75.386)
C4': (90.553,100.446,75.768)
C2': (88.837,100.434,74.103)
C2: (85.617,103.627,72.724)
N1: (85.837,104.921,72.467)
N3: (86.329,102.772,73.464)
N6: (87.173,106.772,72.712)
N7: (88.888,104.989,74.557)
N9: (88.362,102.824,74.799)
O5': (92.135,102.179,75.218)
O3': (90.891,99.087,73.801)
OP1: (98.807,108.004,70.317)
OP2: (97.426,106.542,68.676)
C3': (95.550,111.841,71.443)
C1': (93.480,111.026,70.658)
C5': (96.461,109.644,70.540)
O6: (90.354,106.138,72.064)
O4': (94.450,110.643,69.708)
C8: (91.287,109.858,70.252)
C2: (93.643,107.224,72.825)
C6: (91.348,106.862,72.049)
C5: (91.514,108.085,71.393)
C4: (92.700,108.770,71.536)
P: (97.852,107.892,69.154)
C4': (95.767,110.950,70.218)
C2': (94.213,111.326,71.956)
O2': (93.472,112.233,72.715)
N1: (92.489,106.495,72.756)
N2: (94.646,106.660,73.538)
N3: (93.802,108.406,72.232)
N7: (90.642,108.774,70.572)
N9: (92.536,109.928,70.809)
O5': (96.558,108.807,69.375)
O3': (95.463,113.220,71.092)
Image (generated by PyMOL):
PyMOL image
show in jmol