Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11582:11579
Extra
PDB:
ATOM 1 O3' A A1581 -6.838 33.220 157.872 1.00 74.63 O
ATOM 2 P A A1582 -5.322 32.969 157.510 1.00 74.98 P
ATOM 3 OP1 A A1582 -5.136 31.503 157.408 1.00 74.45 O
ATOM 4 OP2 A A1582 -4.518 33.732 158.497 1.00 75.65 O
ATOM 5 O5' A A1582 -5.205 33.636 156.071 1.00 74.37 O
ATOM 6 C5' A A1582 -5.414 32.859 154.900 1.00 73.52 C
ATOM 7 C4' A A1582 -5.473 33.716 153.675 1.00 73.14 C
ATOM 8 O4' A A1582 -6.364 34.830 153.942 1.00 73.79 O
ATOM 9 C3' A A1582 -4.167 34.386 153.247 1.00 72.90 C
ATOM 10 O3' A A1582 -3.282 33.549 152.500 1.00 72.10 O
ATOM 11 C2' A A1582 -4.678 35.577 152.452 1.00 72.94 C
ATOM 12 O2' A A1582 -5.107 35.172 151.160 1.00 72.20 O
ATOM 13 C1' A A1582 -5.906 35.982 153.278 1.00 73.72 C
ATOM 14 N9 A A1582 -5.555 36.994 154.285 1.00 74.54 N
ATOM 15 C8 A A1582 -4.673 36.810 155.319 1.00 74.90 C
ATOM 16 N7 A A1582 -4.478 37.877 156.050 1.00 75.63 N
ATOM 17 C5 A A1582 -5.279 38.836 155.443 1.00 75.75 C
ATOM 18 C6 A A1582 -5.510 40.176 155.752 1.00 76.43 C
ATOM 19 N6 A A1582 -4.924 40.755 156.780 1.00 77.11 N
ATOM 20 N1 A A1582 -6.356 40.884 154.977 1.00 76.41 N
ATOM 21 C2 A A1582 -6.929 40.258 153.951 1.00 75.73 C
ATOM 22 N3 A A1582 -6.790 38.992 153.555 1.00 75.04 N
ATOM 23 C4 A A1582 -5.939 38.315 154.346 1.00 75.09 C
ATOM 24 P C A1583 -2.129 32.668 153.234 1.00 65.03 P
ATOM 25 OP1 C A1583 -1.593 31.720 152.228 1.00 64.13 O
ATOM 26 OP2 C A1583 -2.745 32.107 154.461 1.00 65.62 O
ATOM 27 O5' C A1583 -0.982 33.732 153.673 1.00 65.42 O
TER
ATOM 1 O3' G B1578 -1.905 41.882 167.391 1.00 88.15 O
ATOM 2 P G B1579 -3.418 41.388 167.551 1.00 92.22 P
ATOM 3 OP1 G B1579 -4.182 42.500 168.143 1.00 93.12 O
ATOM 4 OP2 G B1579 -3.386 40.094 168.259 1.00 92.19 O
ATOM 5 O5' G B1579 -3.866 41.164 166.051 1.00 91.27 O
ATOM 6 C5' G B1579 -4.040 42.263 165.186 1.00 91.16 C
ATOM 7 C4' G B1579 -4.328 41.827 163.776 1.00 90.19 C
ATOM 8 O4' G B1579 -3.208 41.061 163.239 1.00 89.41 O
ATOM 9 C3' G B1579 -5.510 40.896 163.570 1.00 89.92 C
ATOM 10 O3' G B1579 -6.777 41.534 163.698 1.00 90.44 O
ATOM 11 C2' G B1579 -5.227 40.379 162.170 1.00 88.85 C
ATOM 12 O2' G B1579 -5.540 41.378 161.215 1.00 88.70 O
ATOM 13 C1' G B1579 -3.687 40.194 162.220 1.00 88.56 C
ATOM 14 N9 G B1579 -3.352 38.795 162.564 1.00 88.22 N
ATOM 15 C8 G B1579 -3.093 38.248 163.800 1.00 88.74 C
ATOM 16 N7 G B1579 -2.956 36.947 163.802 1.00 88.27 N
ATOM 17 C5 G B1579 -3.176 36.586 162.474 1.00 87.39 C
ATOM 18 C6 G B1579 -3.175 35.303 161.833 1.00 86.59 C
ATOM 19 O6 G B1579 -2.974 34.175 162.303 1.00 86.47 O
ATOM 20 N1 G B1579 -3.445 35.389 160.477 1.00 85.86 N
ATOM 21 C2 G B1579 -3.683 36.551 159.799 1.00 85.89 C
ATOM 22 N2 G B1579 -3.914 36.396 158.483 1.00 85.12 N
ATOM 23 N3 G B1579 -3.693 37.757 160.371 1.00 86.63 N
ATOM 24 C4 G B1579 -3.436 37.711 161.704 1.00 87.35 C
ATOM 25 P U B1580 -7.935 40.866 164.618 1.00 83.33 P
ATOM 26 OP1 U B1580 -9.197 41.621 164.375 1.00 83.68 O
ATOM 27 OP2 U B1580 -7.407 40.794 165.999 1.00 84.05 O
ATOM 28 O5' U B1580 -8.067 39.396 164.024 1.00 82.46 O
TER
ATOM 2 P A A1582 -5.322 32.969 157.510 1.00 74.98 P
ATOM 3 OP1 A A1582 -5.136 31.503 157.408 1.00 74.45 O
ATOM 4 OP2 A A1582 -4.518 33.732 158.497 1.00 75.65 O
ATOM 5 O5' A A1582 -5.205 33.636 156.071 1.00 74.37 O
ATOM 6 C5' A A1582 -5.414 32.859 154.900 1.00 73.52 C
ATOM 7 C4' A A1582 -5.473 33.716 153.675 1.00 73.14 C
ATOM 8 O4' A A1582 -6.364 34.830 153.942 1.00 73.79 O
ATOM 9 C3' A A1582 -4.167 34.386 153.247 1.00 72.90 C
ATOM 10 O3' A A1582 -3.282 33.549 152.500 1.00 72.10 O
ATOM 11 C2' A A1582 -4.678 35.577 152.452 1.00 72.94 C
ATOM 12 O2' A A1582 -5.107 35.172 151.160 1.00 72.20 O
ATOM 13 C1' A A1582 -5.906 35.982 153.278 1.00 73.72 C
ATOM 14 N9 A A1582 -5.555 36.994 154.285 1.00 74.54 N
ATOM 15 C8 A A1582 -4.673 36.810 155.319 1.00 74.90 C
ATOM 16 N7 A A1582 -4.478 37.877 156.050 1.00 75.63 N
ATOM 17 C5 A A1582 -5.279 38.836 155.443 1.00 75.75 C
ATOM 18 C6 A A1582 -5.510 40.176 155.752 1.00 76.43 C
ATOM 19 N6 A A1582 -4.924 40.755 156.780 1.00 77.11 N
ATOM 20 N1 A A1582 -6.356 40.884 154.977 1.00 76.41 N
ATOM 21 C2 A A1582 -6.929 40.258 153.951 1.00 75.73 C
ATOM 22 N3 A A1582 -6.790 38.992 153.555 1.00 75.04 N
ATOM 23 C4 A A1582 -5.939 38.315 154.346 1.00 75.09 C
ATOM 24 P C A1583 -2.129 32.668 153.234 1.00 65.03 P
ATOM 25 OP1 C A1583 -1.593 31.720 152.228 1.00 64.13 O
ATOM 26 OP2 C A1583 -2.745 32.107 154.461 1.00 65.62 O
ATOM 27 O5' C A1583 -0.982 33.732 153.673 1.00 65.42 O
TER
ATOM 1 O3' G B1578 -1.905 41.882 167.391 1.00 88.15 O
ATOM 2 P G B1579 -3.418 41.388 167.551 1.00 92.22 P
ATOM 3 OP1 G B1579 -4.182 42.500 168.143 1.00 93.12 O
ATOM 4 OP2 G B1579 -3.386 40.094 168.259 1.00 92.19 O
ATOM 5 O5' G B1579 -3.866 41.164 166.051 1.00 91.27 O
ATOM 6 C5' G B1579 -4.040 42.263 165.186 1.00 91.16 C
ATOM 7 C4' G B1579 -4.328 41.827 163.776 1.00 90.19 C
ATOM 8 O4' G B1579 -3.208 41.061 163.239 1.00 89.41 O
ATOM 9 C3' G B1579 -5.510 40.896 163.570 1.00 89.92 C
ATOM 10 O3' G B1579 -6.777 41.534 163.698 1.00 90.44 O
ATOM 11 C2' G B1579 -5.227 40.379 162.170 1.00 88.85 C
ATOM 12 O2' G B1579 -5.540 41.378 161.215 1.00 88.70 O
ATOM 13 C1' G B1579 -3.687 40.194 162.220 1.00 88.56 C
ATOM 14 N9 G B1579 -3.352 38.795 162.564 1.00 88.22 N
ATOM 15 C8 G B1579 -3.093 38.248 163.800 1.00 88.74 C
ATOM 16 N7 G B1579 -2.956 36.947 163.802 1.00 88.27 N
ATOM 17 C5 G B1579 -3.176 36.586 162.474 1.00 87.39 C
ATOM 18 C6 G B1579 -3.175 35.303 161.833 1.00 86.59 C
ATOM 19 O6 G B1579 -2.974 34.175 162.303 1.00 86.47 O
ATOM 20 N1 G B1579 -3.445 35.389 160.477 1.00 85.86 N
ATOM 21 C2 G B1579 -3.683 36.551 159.799 1.00 85.89 C
ATOM 22 N2 G B1579 -3.914 36.396 158.483 1.00 85.12 N
ATOM 23 N3 G B1579 -3.693 37.757 160.371 1.00 86.63 N
ATOM 24 C4 G B1579 -3.436 37.711 161.704 1.00 87.35 C
ATOM 25 P U B1580 -7.935 40.866 164.618 1.00 83.33 P
ATOM 26 OP1 U B1580 -9.197 41.621 164.375 1.00 83.68 O
ATOM 27 OP2 U B1580 -7.407 40.794 165.999 1.00 84.05 O
ATOM 28 O5' U B1580 -8.067 39.396 164.024 1.00 82.46 O
TER
Atoms:
OP1: (-5.136,31.503,157.408)
OP2: (-4.518,33.732,158.497)
C3': (-4.167,34.386,153.247)
C1': (-5.906,35.982,153.278)
C5': (-5.414,32.859,154.900)
O4': (-6.364,34.830,153.942)
C8: (-4.673,36.810,155.319)
O2': (-5.107,35.172,151.160)
C6: (-5.510,40.176,155.752)
C5: (-5.279,38.836,155.443)
C4: (-5.939,38.315,154.346)
P: (-5.322,32.969,157.510)
C4': (-5.473,33.716,153.675)
C2': (-4.678,35.577,152.452)
C2: (-6.929,40.258,153.951)
N1: (-6.356,40.884,154.977)
N3: (-6.790,38.992,153.555)
N6: (-4.924,40.755,156.780)
N7: (-4.478,37.877,156.050)
N9: (-5.555,36.994,154.285)
O5': (-5.205,33.636,156.071)
O3': (-3.282,33.549,152.500)
OP2: (-4.518,33.732,158.497)
C3': (-4.167,34.386,153.247)
C1': (-5.906,35.982,153.278)
C5': (-5.414,32.859,154.900)
O4': (-6.364,34.830,153.942)
C8: (-4.673,36.810,155.319)
O2': (-5.107,35.172,151.160)
C6: (-5.510,40.176,155.752)
C5: (-5.279,38.836,155.443)
C4: (-5.939,38.315,154.346)
P: (-5.322,32.969,157.510)
C4': (-5.473,33.716,153.675)
C2': (-4.678,35.577,152.452)
C2: (-6.929,40.258,153.951)
N1: (-6.356,40.884,154.977)
N3: (-6.790,38.992,153.555)
N6: (-4.924,40.755,156.780)
N7: (-4.478,37.877,156.050)
N9: (-5.555,36.994,154.285)
O5': (-5.205,33.636,156.071)
O3': (-3.282,33.549,152.500)
OP1: (-4.182,42.500,168.143)
OP2: (-3.386,40.094,168.259)
C3': (-5.510,40.896,163.570)
C1': (-3.687,40.194,162.220)
C5': (-4.040,42.263,165.186)
O6: (-2.974,34.175,162.303)
O4': (-3.208,41.061,163.239)
C8: (-3.093,38.248,163.800)
C2: (-3.683,36.551,159.799)
C6: (-3.175,35.303,161.833)
C5: (-3.176,36.586,162.474)
C4: (-3.436,37.711,161.704)
P: (-3.418,41.388,167.551)
C4': (-4.328,41.827,163.776)
C2': (-5.227,40.379,162.170)
O2': (-5.540,41.378,161.215)
N1: (-3.445,35.389,160.477)
N2: (-3.914,36.396,158.483)
N3: (-3.693,37.757,160.371)
N7: (-2.956,36.947,163.802)
N9: (-3.352,38.795,162.564)
O5': (-3.866,41.164,166.051)
O3': (-6.777,41.534,163.698)
OP2: (-3.386,40.094,168.259)
C3': (-5.510,40.896,163.570)
C1': (-3.687,40.194,162.220)
C5': (-4.040,42.263,165.186)
O6: (-2.974,34.175,162.303)
O4': (-3.208,41.061,163.239)
C8: (-3.093,38.248,163.800)
C2: (-3.683,36.551,159.799)
C6: (-3.175,35.303,161.833)
C5: (-3.176,36.586,162.474)
C4: (-3.436,37.711,161.704)
P: (-3.418,41.388,167.551)
C4': (-4.328,41.827,163.776)
C2': (-5.227,40.379,162.170)
O2': (-5.540,41.378,161.215)
N1: (-3.445,35.389,160.477)
N2: (-3.914,36.396,158.483)
N3: (-3.693,37.757,160.371)
N7: (-2.956,36.947,163.802)
N9: (-3.352,38.795,162.564)
O5': (-3.866,41.164,166.051)
O3': (-6.777,41.534,163.698)
Image (generated by PyMOL):