ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:992:989

Extra

PDB:
ATOM 1 O3' G A 91 49.893 90.155 119.294 1.00 55.87 O
ATOM 2 P A A 92 49.463 88.797 118.547 1.00 55.87 P
ATOM 3 OP1 A A 92 49.643 89.055 117.090 1.00 57.39 O
ATOM 4 OP2 A A 92 48.150 88.347 119.045 1.00 57.58 O
ATOM 5 O5' A A 92 50.545 87.725 119.006 1.00 56.61 O
ATOM 6 C5' A A 92 51.794 87.603 118.310 1.00 57.72 C
ATOM 7 C4' A A 92 52.656 86.548 118.957 1.00 59.72 C
ATOM 8 O4' A A 92 52.894 86.915 120.341 1.00 60.11 O
ATOM 9 C3' A A 92 52.085 85.141 119.054 1.00 60.11 C
ATOM 10 O3' A A 92 52.275 84.397 117.860 1.00 62.96 O
ATOM 11 C2' A A 92 52.945 84.557 120.161 1.00 60.82 C
ATOM 12 O2' A A 92 54.254 84.256 119.711 1.00 61.69 O
ATOM 13 C1' A A 92 53.021 85.740 121.124 1.00 59.80 C
ATOM 14 N9 A A 92 51.922 85.701 122.085 1.00 59.41 N
ATOM 15 C8 A A 92 50.722 86.373 122.046 1.00 60.13 C
ATOM 16 N7 A A 92 49.927 86.093 123.048 1.00 59.97 N
ATOM 17 C5 A A 92 50.653 85.181 123.803 1.00 59.83 C
ATOM 18 C6 A A 92 50.361 84.494 124.991 1.00 58.38 C
ATOM 19 N6 A A 92 49.209 84.622 125.651 1.00 56.63 N
ATOM 20 N1 A A 92 51.303 83.657 125.481 1.00 59.82 N
ATOM 21 C2 A A 92 52.459 83.523 124.811 1.00 59.17 C
ATOM 22 N3 A A 92 52.849 84.112 123.683 1.00 59.44 N
ATOM 23 C4 A A 92 51.888 84.938 123.225 1.00 60.00 C
ATOM 24 P G A 93 51.006 83.855 117.035 1.00 65.01 P
ATOM 25 OP1 G A 93 51.527 82.929 115.994 1.00 66.32 O
ATOM 26 OP2 G A 93 50.204 85.041 116.631 1.00 66.35 O
ATOM 27 O5' G A 93 50.124 83.006 118.063 1.00 65.99 O
TER

ATOM 1 O3' C B 88 38.329 89.406 126.899 1.00 50.72 O
ATOM 2 P G B 89 39.216 90.745 126.824 1.00 52.20 P
ATOM 3 OP1 G B 89 39.174 91.371 128.165 1.00 54.79 O
ATOM 4 OP2 G B 89 38.770 91.522 125.643 1.00 55.52 O
ATOM 5 O5' G B 89 40.705 90.228 126.564 1.00 52.69 O
ATOM 6 C5' G B 89 41.423 89.500 127.585 1.00 50.87 C
ATOM 7 C4' G B 89 42.798 89.092 127.097 1.00 49.94 C
ATOM 8 O4' G B 89 42.685 88.220 125.943 1.00 48.41 O
ATOM 9 C3' G B 89 43.700 90.196 126.579 1.00 50.15 C
ATOM 10 O3' G B 89 44.296 90.926 127.635 1.00 51.23 O
ATOM 11 C2' G B 89 44.742 89.408 125.799 1.00 49.34 C
ATOM 12 O2' G B 89 45.750 88.848 126.610 1.00 51.51 O
ATOM 13 C1' G B 89 43.889 88.287 125.197 1.00 50.22 C
ATOM 14 N9 G B 89 43.592 88.566 123.794 1.00 50.91 N
ATOM 15 C8 G B 89 42.451 89.099 123.250 1.00 49.28 C
ATOM 16 N7 G B 89 42.551 89.307 121.965 1.00 51.27 N
ATOM 17 C5 G B 89 43.828 88.869 121.643 1.00 50.78 C
ATOM 18 C6 G B 89 44.522 88.869 120.404 1.00 52.10 C
ATOM 19 O6 G B 89 44.144 89.293 119.305 1.00 55.40 O
ATOM 20 N1 G B 89 45.793 88.319 120.531 1.00 51.65 N
ATOM 21 C2 G B 89 46.338 87.851 121.698 1.00 50.68 C
ATOM 22 N2 G B 89 47.583 87.358 121.628 1.00 50.96 N
ATOM 23 N3 G B 89 45.711 87.865 122.853 1.00 52.18 N
ATOM 24 C4 G B 89 44.469 88.383 122.753 1.00 50.87 C
ATOM 25 P C B 90 44.245 92.530 127.617 1.00 53.28 P
ATOM 26 OP1 C B 90 44.900 93.017 128.853 1.00 53.91 O
ATOM 27 OP2 C B 90 42.852 92.961 127.309 1.00 54.47 O
ATOM 28 O5' C B 90 45.149 92.933 126.370 1.00 52.77 O
TER

Atoms:
OP1: (49.643,89.055,117.090)
OP2: (48.150,88.347,119.045)
C3': (52.085,85.141,119.054)
C1': (53.021,85.740,121.124)
C5': (51.794,87.603,118.310)
O4': (52.894,86.915,120.341)
C8: (50.722,86.373,122.046)
O2': (54.254,84.256,119.711)
C6: (50.361,84.494,124.991)
C5: (50.653,85.181,123.803)
C4: (51.888,84.938,123.225)
P: (49.463,88.797,118.547)
C4': (52.656,86.548,118.957)
C2': (52.945,84.557,120.161)
C2: (52.459,83.523,124.811)
N1: (51.303,83.657,125.481)
N3: (52.849,84.112,123.683)
N6: (49.209,84.622,125.651)
N7: (49.927,86.093,123.048)
N9: (51.922,85.701,122.085)
O5': (50.545,87.725,119.006)
O3': (52.275,84.397,117.860)
OP1: (39.174,91.371,128.165)
OP2: (38.770,91.522,125.643)
C3': (43.700,90.196,126.579)
C1': (43.889,88.287,125.197)
C5': (41.423,89.500,127.585)
O6: (44.144,89.293,119.305)
O4': (42.685,88.220,125.943)
C8: (42.451,89.099,123.250)
C2: (46.338,87.851,121.698)
C6: (44.522,88.869,120.404)
C5: (43.828,88.869,121.643)
C4: (44.469,88.383,122.753)
P: (39.216,90.745,126.824)
C4': (42.798,89.092,127.097)
C2': (44.742,89.408,125.799)
O2': (45.750,88.848,126.610)
N1: (45.793,88.319,120.531)
N2: (47.583,87.358,121.628)
N3: (45.711,87.865,122.853)
N7: (42.551,89.307,121.965)
N9: (43.592,88.566,123.794)
O5': (40.705,90.228,126.564)
O3': (44.296,90.926,127.635)
Image (generated by PyMOL):
PyMOL image
show in jmol