Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5P:E42:E43
Extra
PDB:
ATOM 1 O3' C A 41 40.004 23.116 104.177 1.00 68.62 O
ATOM 2 P U A 42 39.343 21.968 105.059 1.00 79.87 P
ATOM 3 OP1 U A 42 39.982 21.996 106.395 1.00101.17 O
ATOM 4 OP2 U A 42 39.292 20.700 104.295 1.00102.68 O
ATOM 5 O5' U A 42 37.862 22.488 105.265 1.00 88.02 O
ATOM 6 C5' U A 42 36.764 21.609 105.090 1.00107.50 C
ATOM 7 C4' U A 42 35.660 22.308 104.349 1.00 93.69 C
ATOM 8 O4' U A 42 36.074 22.554 102.990 1.00105.15 O
ATOM 9 C3' U A 42 34.391 21.507 104.187 1.00 85.75 C
ATOM 10 O3' U A 42 33.627 21.686 105.362 1.00109.90 O
ATOM 11 C2' U A 42 33.724 22.197 103.007 1.00102.91 C
ATOM 12 O2' U A 42 33.020 23.348 103.430 1.00112.43 O
ATOM 13 C1' U A 42 34.932 22.604 102.156 1.00120.33 C
ATOM 14 N1 U A 42 35.189 21.773 100.971 1.00131.00 N
ATOM 15 C2 U A 42 34.755 22.247 99.738 1.00132.84 C
ATOM 16 O2 U A 42 34.162 23.308 99.602 1.00130.87 O
ATOM 17 N3 U A 42 35.047 21.433 98.671 1.00135.38 N
ATOM 18 C4 U A 42 35.708 20.220 98.706 1.00137.06 C
ATOM 19 O4 U A 42 35.896 19.602 97.656 1.00138.20 O
ATOM 20 C5 U A 42 36.117 19.797 100.013 1.00136.66 C
ATOM 21 C6 U A 42 35.848 20.568 101.074 1.00134.78 C
ATOM 22 P C A 43 32.570 20.573 105.793 1.00128.21 P
ATOM 23 OP1 C A 43 32.075 20.946 107.143 1.00139.29 O
ATOM 24 OP2 C A 43 33.215 19.249 105.585 1.00132.82 O
ATOM 25 O5' C A 43 31.393 20.750 104.736 1.00 99.39 O
TER
ATOM 1 O3' U B 42 33.627 21.686 105.362 1.00109.90 O
ATOM 2 P C B 43 32.570 20.573 105.793 1.00128.21 P
ATOM 3 OP1 C B 43 32.075 20.946 107.143 1.00139.29 O
ATOM 4 OP2 C B 43 33.215 19.249 105.585 1.00132.82 O
ATOM 5 O5' C B 43 31.393 20.750 104.736 1.00 99.39 O
ATOM 6 C5' C B 43 30.957 19.661 103.931 1.00 93.26 C
ATOM 7 C4' C B 43 29.476 19.770 103.691 1.00100.36 C
ATOM 8 O4' C B 43 28.786 19.622 104.967 1.00102.99 O
ATOM 9 C3' C B 43 29.029 21.128 103.178 1.00109.13 C
ATOM 10 O3' C B 43 29.183 21.256 101.763 1.00 91.05 O
ATOM 11 C2' C B 43 27.587 21.181 103.668 1.00116.78 C
ATOM 12 O2' C B 43 26.708 20.381 102.898 1.00120.58 O
ATOM 13 C1' C B 43 27.738 20.579 105.069 1.00106.75 C
ATOM 14 N1 C B 43 28.134 21.580 106.087 1.00104.70 N
ATOM 15 C2 C B 43 27.151 22.153 106.925 1.00 99.53 C
ATOM 16 O2 C B 43 25.963 21.808 106.797 1.00 99.00 O
ATOM 17 N3 C B 43 27.530 23.069 107.848 1.00 94.00 N
ATOM 18 C4 C B 43 28.819 23.420 107.956 1.00 96.69 C
ATOM 19 N4 C B 43 29.150 24.324 108.880 1.00 98.92 N
ATOM 20 C5 C B 43 29.827 22.859 107.122 1.00 98.16 C
ATOM 21 C6 C B 43 29.445 21.953 106.214 1.00101.21 C
ATOM 22 P C B 44 29.726 22.644 101.152 1.00 81.21 P
ATOM 23 OP1 C B 44 30.167 22.436 99.754 1.00 83.39 O
ATOM 24 OP2 C B 44 30.668 23.224 102.139 1.00 83.60 O
ATOM 25 O5' C B 44 28.438 23.568 101.143 1.00 70.85 O
TER
ATOM 2 P U A 42 39.343 21.968 105.059 1.00 79.87 P
ATOM 3 OP1 U A 42 39.982 21.996 106.395 1.00101.17 O
ATOM 4 OP2 U A 42 39.292 20.700 104.295 1.00102.68 O
ATOM 5 O5' U A 42 37.862 22.488 105.265 1.00 88.02 O
ATOM 6 C5' U A 42 36.764 21.609 105.090 1.00107.50 C
ATOM 7 C4' U A 42 35.660 22.308 104.349 1.00 93.69 C
ATOM 8 O4' U A 42 36.074 22.554 102.990 1.00105.15 O
ATOM 9 C3' U A 42 34.391 21.507 104.187 1.00 85.75 C
ATOM 10 O3' U A 42 33.627 21.686 105.362 1.00109.90 O
ATOM 11 C2' U A 42 33.724 22.197 103.007 1.00102.91 C
ATOM 12 O2' U A 42 33.020 23.348 103.430 1.00112.43 O
ATOM 13 C1' U A 42 34.932 22.604 102.156 1.00120.33 C
ATOM 14 N1 U A 42 35.189 21.773 100.971 1.00131.00 N
ATOM 15 C2 U A 42 34.755 22.247 99.738 1.00132.84 C
ATOM 16 O2 U A 42 34.162 23.308 99.602 1.00130.87 O
ATOM 17 N3 U A 42 35.047 21.433 98.671 1.00135.38 N
ATOM 18 C4 U A 42 35.708 20.220 98.706 1.00137.06 C
ATOM 19 O4 U A 42 35.896 19.602 97.656 1.00138.20 O
ATOM 20 C5 U A 42 36.117 19.797 100.013 1.00136.66 C
ATOM 21 C6 U A 42 35.848 20.568 101.074 1.00134.78 C
ATOM 22 P C A 43 32.570 20.573 105.793 1.00128.21 P
ATOM 23 OP1 C A 43 32.075 20.946 107.143 1.00139.29 O
ATOM 24 OP2 C A 43 33.215 19.249 105.585 1.00132.82 O
ATOM 25 O5' C A 43 31.393 20.750 104.736 1.00 99.39 O
TER
ATOM 1 O3' U B 42 33.627 21.686 105.362 1.00109.90 O
ATOM 2 P C B 43 32.570 20.573 105.793 1.00128.21 P
ATOM 3 OP1 C B 43 32.075 20.946 107.143 1.00139.29 O
ATOM 4 OP2 C B 43 33.215 19.249 105.585 1.00132.82 O
ATOM 5 O5' C B 43 31.393 20.750 104.736 1.00 99.39 O
ATOM 6 C5' C B 43 30.957 19.661 103.931 1.00 93.26 C
ATOM 7 C4' C B 43 29.476 19.770 103.691 1.00100.36 C
ATOM 8 O4' C B 43 28.786 19.622 104.967 1.00102.99 O
ATOM 9 C3' C B 43 29.029 21.128 103.178 1.00109.13 C
ATOM 10 O3' C B 43 29.183 21.256 101.763 1.00 91.05 O
ATOM 11 C2' C B 43 27.587 21.181 103.668 1.00116.78 C
ATOM 12 O2' C B 43 26.708 20.381 102.898 1.00120.58 O
ATOM 13 C1' C B 43 27.738 20.579 105.069 1.00106.75 C
ATOM 14 N1 C B 43 28.134 21.580 106.087 1.00104.70 N
ATOM 15 C2 C B 43 27.151 22.153 106.925 1.00 99.53 C
ATOM 16 O2 C B 43 25.963 21.808 106.797 1.00 99.00 O
ATOM 17 N3 C B 43 27.530 23.069 107.848 1.00 94.00 N
ATOM 18 C4 C B 43 28.819 23.420 107.956 1.00 96.69 C
ATOM 19 N4 C B 43 29.150 24.324 108.880 1.00 98.92 N
ATOM 20 C5 C B 43 29.827 22.859 107.122 1.00 98.16 C
ATOM 21 C6 C B 43 29.445 21.953 106.214 1.00101.21 C
ATOM 22 P C B 44 29.726 22.644 101.152 1.00 81.21 P
ATOM 23 OP1 C B 44 30.167 22.436 99.754 1.00 83.39 O
ATOM 24 OP2 C B 44 30.668 23.224 102.139 1.00 83.60 O
ATOM 25 O5' C B 44 28.438 23.568 101.143 1.00 70.85 O
TER
Atoms:
C4: (35.708,20.220,98.706)
N3: (35.047,21.433,98.671)
OP1: (39.982,21.996,106.395)
OP2: (39.292,20.700,104.295)
C2: (34.755,22.247,99.738)
C1': (34.932,22.604,102.156)
C3': (34.391,21.507,104.187)
O5': (37.862,22.488,105.265)
O4': (36.074,22.554,102.990)
C5': (36.764,21.609,105.090)
P: (39.343,21.968,105.059)
C4': (35.660,22.308,104.349)
C2': (33.724,22.197,103.007)
O2': (33.020,23.348,103.430)
N1: (35.189,21.773,100.971)
O4: (35.896,19.602,97.656)
O2: (34.162,23.308,99.602)
C6: (35.848,20.568,101.074)
C5: (36.117,19.797,100.013)
O3': (33.627,21.686,105.362)
N3: (35.047,21.433,98.671)
OP1: (39.982,21.996,106.395)
OP2: (39.292,20.700,104.295)
C2: (34.755,22.247,99.738)
C1': (34.932,22.604,102.156)
C3': (34.391,21.507,104.187)
O5': (37.862,22.488,105.265)
O4': (36.074,22.554,102.990)
C5': (36.764,21.609,105.090)
P: (39.343,21.968,105.059)
C4': (35.660,22.308,104.349)
C2': (33.724,22.197,103.007)
O2': (33.020,23.348,103.430)
N1: (35.189,21.773,100.971)
O4: (35.896,19.602,97.656)
O2: (34.162,23.308,99.602)
C6: (35.848,20.568,101.074)
C5: (36.117,19.797,100.013)
O3': (33.627,21.686,105.362)
C2: (27.151,22.153,106.925)
OP1: (32.075,20.946,107.143)
OP2: (33.215,19.249,105.585)
C4: (28.819,23.420,107.956)
O5': (31.393,20.750,104.736)
C3': (29.029,21.128,103.178)
C1': (27.738,20.579,105.069)
O4': (28.786,19.622,104.967)
C5': (30.957,19.661,103.931)
P: (32.570,20.573,105.793)
O2: (25.963,21.808,106.797)
C4': (29.476,19.770,103.691)
C2': (27.587,21.181,103.668)
O2': (26.708,20.381,102.898)
N1: (28.134,21.580,106.087)
N3: (27.530,23.069,107.848)
N4: (29.150,24.324,108.880)
C6: (29.445,21.953,106.214)
C5: (29.827,22.859,107.122)
O3': (29.183,21.256,101.763)
OP1: (32.075,20.946,107.143)
OP2: (33.215,19.249,105.585)
C4: (28.819,23.420,107.956)
O5': (31.393,20.750,104.736)
C3': (29.029,21.128,103.178)
C1': (27.738,20.579,105.069)
O4': (28.786,19.622,104.967)
C5': (30.957,19.661,103.931)
P: (32.570,20.573,105.793)
O2: (25.963,21.808,106.797)
C4': (29.476,19.770,103.691)
C2': (27.587,21.181,103.668)
O2': (26.708,20.381,102.898)
N1: (28.134,21.580,106.087)
N3: (27.530,23.069,107.848)
N4: (29.150,24.324,108.880)
C6: (29.445,21.953,106.214)
C5: (29.827,22.859,107.122)
O3': (29.183,21.256,101.763)
Image (generated by PyMOL):